BLASTX nr result
ID: Glycyrrhiza28_contig00033021
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00033021
(318 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcri... 193 3e-55
GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterran... 187 5e-53
XP_013449281.1 mediator of RNA polymerase II transcription subun... 185 3e-52
XP_003623670.1 mediator of RNA polymerase II transcription subun... 185 3e-52
XP_007140028.1 hypothetical protein PHAVU_008G078200g [Phaseolus... 181 4e-51
KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan] 172 1e-47
XP_014497735.1 PREDICTED: mediator of RNA polymerase II transcri... 172 1e-47
XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcri... 172 1e-47
XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcri... 172 1e-47
BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis ... 172 1e-47
XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcri... 164 7e-45
XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcri... 164 7e-45
KRH00533.1 hypothetical protein GLYMA_18G218900 [Glycine max] 159 3e-43
KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja] 159 3e-43
XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcri... 159 3e-43
CAQ58623.1 unknown gene [Vitis vinifera] 141 8e-37
XP_019077175.1 PREDICTED: mediator of RNA polymerase II transcri... 139 4e-36
XP_010653099.1 PREDICTED: mediator of RNA polymerase II transcri... 139 4e-36
XP_010653098.1 PREDICTED: mediator of RNA polymerase II transcri... 139 4e-36
XP_002264843.2 PREDICTED: mediator of RNA polymerase II transcri... 139 4e-36
>XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cicer arietinum]
Length = 1318
Score = 193 bits (491), Expect = 3e-55
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGWYIQEHVVHYV+KLLASPVPHSHSGT VDN SMLSAVLRGASCVDTV ILSLHGV
Sbjct: 602 RGWYIQEHVVHYVIKLLASPVPHSHSGTWGPLVDNTSMLSAVLRGASCVDTVHILSLHGV 661
Query: 182 VPTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
VPTVAASLLPLCEAFGSITPT NSTGDEPSTS+YMAFSLAFLFLI
Sbjct: 662 VPTVAASLLPLCEAFGSITPTPNSTGDEPSTSVYMAFSLAFLFLI 706
>GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterraneum]
Length = 1247
Score = 187 bits (475), Expect = 5e-53
Identities = 96/105 (91%), Positives = 98/105 (93%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGWYIQEHVV+YVVKLLASPVP SHSGT L VDNMSMLSAVLRGASCVDTV ILSLHGV
Sbjct: 533 RGWYIQEHVVYYVVKLLASPVP-SHSGTWGLLVDNMSMLSAVLRGASCVDTVHILSLHGV 591
Query: 182 VPTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
VPTVAASLLPLCEAFGSITPT NSTGDEPSTS+YM FSLAFLFLI
Sbjct: 592 VPTVAASLLPLCEAFGSITPTPNSTGDEPSTSVYMTFSLAFLFLI 636
>XP_013449281.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] KEH23308.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 992
Score = 185 bits (469), Expect = 3e-52
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGWYIQEHVVHYVVKLLA PVPHS+SGTR L+VDNMSM+SAVLRGAS VDT+ ILSLHGV
Sbjct: 276 RGWYIQEHVVHYVVKLLACPVPHSNSGTRGLFVDNMSMISAVLRGASSVDTLHILSLHGV 335
Query: 182 VPTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
VPTVAASLLPLCEAFGSI+PT STGDE STS+YMAFSLAFLFLI
Sbjct: 336 VPTVAASLLPLCEAFGSISPTPISTGDESSTSVYMAFSLAFLFLI 380
>XP_003623670.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] AES79888.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 1320
Score = 185 bits (469), Expect = 3e-52
Identities = 92/105 (87%), Positives = 98/105 (93%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGWYIQEHVVHYVVKLLA PVPHS+SGTR L+VDNMSM+SAVLRGAS VDT+ ILSLHGV
Sbjct: 604 RGWYIQEHVVHYVVKLLACPVPHSNSGTRGLFVDNMSMISAVLRGASSVDTLHILSLHGV 663
Query: 182 VPTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
VPTVAASLLPLCEAFGSI+PT STGDE STS+YMAFSLAFLFLI
Sbjct: 664 VPTVAASLLPLCEAFGSISPTPISTGDESSTSVYMAFSLAFLFLI 708
>XP_007140028.1 hypothetical protein PHAVU_008G078200g [Phaseolus vulgaris]
ESW12022.1 hypothetical protein PHAVU_008G078200g
[Phaseolus vulgaris]
Length = 960
Score = 181 bits (460), Expect = 4e-51
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHV+HYVVKLLASP+P SH+G+RSL VDNM MLSAVLRGAS VDTV ILSLHGVV
Sbjct: 613 GWYIQEHVIHYVVKLLASPLPPSHAGSRSLLVDNMPMLSAVLRGASSVDTVHILSLHGVV 672
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAA+LLPLCEAFGSI PTSNSTGDE STS YMAFSLAFLFLI
Sbjct: 673 PTVAAALLPLCEAFGSIKPTSNSTGDESSTSTYMAFSLAFLFLI 716
>KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan]
Length = 1233
Score = 172 bits (436), Expect = 1e-47
Identities = 88/104 (84%), Positives = 92/104 (88%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHVVH+V+KLLASPV SHSG+ SL VDNM MLSAVLRGAS +D V ILSLHGVV
Sbjct: 592 GWYIQEHVVHHVIKLLASPVSPSHSGSWSLLVDNMPMLSAVLRGASSIDIVHILSLHGVV 651
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAASLLPLCEAFGSI PTSNS GDE STSIYM FSLAFLFLI
Sbjct: 652 PTVAASLLPLCEAFGSIKPTSNSIGDESSTSIYMVFSLAFLFLI 695
>XP_014497735.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Vigna radiata var. radiata]
Length = 1043
Score = 172 bits (435), Expect = 1e-47
Identities = 87/104 (83%), Positives = 95/104 (91%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHV+H+V+KLLASP+P SH+G+RSL VDNM ML AVLRGAS VDTV ILSLHGVV
Sbjct: 612 GWYIQEHVIHHVIKLLASPLPPSHAGSRSLLVDNMPMLCAVLRGASSVDTVHILSLHGVV 671
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAA+LLPLCEAFGSI PTSNSTGDE ST+ YMAFSLAFLFLI
Sbjct: 672 PTVAAALLPLCEAFGSIKPTSNSTGDESSTT-YMAFSLAFLFLI 714
>XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Vigna radiata var. radiata]
Length = 1326
Score = 172 bits (435), Expect = 1e-47
Identities = 87/104 (83%), Positives = 95/104 (91%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHV+H+V+KLLASP+P SH+G+RSL VDNM ML AVLRGAS VDTV ILSLHGVV
Sbjct: 612 GWYIQEHVIHHVIKLLASPLPPSHAGSRSLLVDNMPMLCAVLRGASSVDTVHILSLHGVV 671
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAA+LLPLCEAFGSI PTSNSTGDE ST+ YMAFSLAFLFLI
Sbjct: 672 PTVAAALLPLCEAFGSIKPTSNSTGDESSTT-YMAFSLAFLFLI 714
>XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Vigna angularis]
Length = 1331
Score = 172 bits (435), Expect = 1e-47
Identities = 87/104 (83%), Positives = 95/104 (91%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHV+H+V+KLLASP+P SH+G+RSL VDNM ML AVLRGAS VDTV ILSLHGVV
Sbjct: 612 GWYIQEHVIHHVIKLLASPLPPSHAGSRSLLVDNMPMLCAVLRGASSVDTVHILSLHGVV 671
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAA+LLPLCEAFGSI PTSNSTGDE ST+ YMAFSLAFLFLI
Sbjct: 672 PTVAAALLPLCEAFGSIKPTSNSTGDESSTT-YMAFSLAFLFLI 714
>BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis var.
angularis]
Length = 1331
Score = 172 bits (435), Expect = 1e-47
Identities = 87/104 (83%), Positives = 95/104 (91%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHV+H+V+KLLASP+P SH+G+RSL VDNM ML AVLRGAS VDTV ILSLHGVV
Sbjct: 612 GWYIQEHVIHHVIKLLASPLPPSHAGSRSLLVDNMPMLCAVLRGASSVDTVHILSLHGVV 671
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAA+LLPLCEAFGSI PTSNSTGDE ST+ YMAFSLAFLFLI
Sbjct: 672 PTVAAALLPLCEAFGSIKPTSNSTGDESSTT-YMAFSLAFLFLI 714
>XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis duranensis]
Length = 1324
Score = 164 bits (415), Expect = 7e-45
Identities = 82/104 (78%), Positives = 90/104 (86%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHVVH+VVK LAS VP +HSG+ S ++NMSMLSAVL G S VDTV ILSLHGV+
Sbjct: 616 GWYIQEHVVHFVVKFLASSVPFTHSGSWSHLINNMSMLSAVLHGVSSVDTVHILSLHGVI 675
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAASLLPLCEAFGS+ PTSNST +EPS S YMAFSLAFLFLI
Sbjct: 676 PTVAASLLPLCEAFGSVKPTSNSTSNEPSASPYMAFSLAFLFLI 719
>XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis ipaensis]
Length = 1326
Score = 164 bits (415), Expect = 7e-45
Identities = 82/104 (78%), Positives = 90/104 (86%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHVVH+VVK LAS VP +HSG+ S ++NMSMLSAVL G S VDTV ILSLHGV+
Sbjct: 616 GWYIQEHVVHFVVKFLASSVPFTHSGSWSHLINNMSMLSAVLHGVSSVDTVHILSLHGVI 675
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDEPSTSIYMAFSLAFLFLI 316
PTVAASLLPLCEAFGS+ PTSNST +EPS S YMAFSLAFLFLI
Sbjct: 676 PTVAASLLPLCEAFGSVKPTSNSTSNEPSASPYMAFSLAFLFLI 719
>KRH00533.1 hypothetical protein GLYMA_18G218900 [Glycine max]
Length = 966
Score = 159 bits (403), Expect = 3e-43
Identities = 83/109 (76%), Positives = 90/109 (82%), Gaps = 5/109 (4%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHVVH+VVKLLASPVP SHSG++S V+NM ML AVLRG S +DT+ ILSL+GVV
Sbjct: 610 GWYIQEHVVHHVVKLLASPVPPSHSGSQSPLVNNMPMLCAVLRGTSSIDTIHILSLYGVV 669
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDE-----PSTSIYMAFSLAFLFLI 316
P VAASLLPLCE FGSI PTSNSTGDE STS YM FSLAFLFLI
Sbjct: 670 PAVAASLLPLCETFGSIKPTSNSTGDESSSTSTSTSTYMTFSLAFLFLI 718
>KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja]
Length = 1332
Score = 159 bits (403), Expect = 3e-43
Identities = 83/109 (76%), Positives = 90/109 (82%), Gaps = 5/109 (4%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHVVH+VVKLLASPVP SHSG++S V+NM ML AVLRG S +DT+ ILSL+GVV
Sbjct: 610 GWYIQEHVVHHVVKLLASPVPPSHSGSQSPLVNNMPMLCAVLRGTSSIDTIHILSLYGVV 669
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDE-----PSTSIYMAFSLAFLFLI 316
P VAASLLPLCE FGSI PTSNSTGDE STS YM FSLAFLFLI
Sbjct: 670 PAVAASLLPLCETFGSIKPTSNSTGDESSSTSTSTSTYMTFSLAFLFLI 718
>XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Glycine max] KRH00532.1 hypothetical protein
GLYMA_18G218900 [Glycine max]
Length = 1332
Score = 159 bits (403), Expect = 3e-43
Identities = 83/109 (76%), Positives = 90/109 (82%), Gaps = 5/109 (4%)
Frame = +2
Query: 5 GWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGVV 184
GWYIQEHVVH+VVKLLASPVP SHSG++S V+NM ML AVLRG S +DT+ ILSL+GVV
Sbjct: 610 GWYIQEHVVHHVVKLLASPVPPSHSGSQSPLVNNMPMLCAVLRGTSSIDTIHILSLYGVV 669
Query: 185 PTVAASLLPLCEAFGSITPTSNSTGDE-----PSTSIYMAFSLAFLFLI 316
P VAASLLPLCE FGSI PTSNSTGDE STS YM FSLAFLFLI
Sbjct: 670 PAVAASLLPLCETFGSIKPTSNSTGDESSSTSTSTSTYMTFSLAFLFLI 718
>CAQ58623.1 unknown gene [Vitis vinifera]
Length = 1472
Score = 141 bits (355), Expect = 8e-37
Identities = 73/108 (67%), Positives = 87/108 (80%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGW IQEHVVH++VKLL+ P+P + +GTRS +D + MLSA+L GAS +DTV ILSLHGV
Sbjct: 707 RGWNIQEHVVHFMVKLLSPPIPPNFTGTRSHLIDYLPMLSAILFGASSIDTVHILSLHGV 766
Query: 182 VPTVAASLLPLCEAFGSITPTSN---STGDEPSTSIYMAFSLAFLFLI 316
VP VAA+L+PLCEAFGS+TPTSN S GDE SIYM FS AFLFL+
Sbjct: 767 VPEVAAALMPLCEAFGSVTPTSNHKSSMGDE--LSIYMVFSSAFLFLL 812
>XP_019077175.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X4 [Vitis vinifera]
Length = 976
Score = 139 bits (350), Expect = 4e-36
Identities = 73/108 (67%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGW IQEHVVH +VKLL+ P+P + +GTRS +D + MLSA+L GAS +DTV ILSLHGV
Sbjct: 616 RGWNIQEHVVHSMVKLLSPPIPPNFTGTRSHLIDYLPMLSAILFGASSIDTVHILSLHGV 675
Query: 182 VPTVAASLLPLCEAFGSITPTSN---STGDEPSTSIYMAFSLAFLFLI 316
VP VAA+L+PLCEAFGS+TPTSN S GDE SIYM FS AFLFL+
Sbjct: 676 VPEVAAALMPLCEAFGSVTPTSNHKSSMGDE--LSIYMVFSSAFLFLL 721
>XP_010653099.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X3 [Vitis vinifera]
Length = 1310
Score = 139 bits (350), Expect = 4e-36
Identities = 73/108 (67%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGW IQEHVVH +VKLL+ P+P + +GTRS +D + MLSA+L GAS +DTV ILSLHGV
Sbjct: 616 RGWNIQEHVVHSMVKLLSPPIPPNFTGTRSHLIDYLPMLSAILFGASSIDTVHILSLHGV 675
Query: 182 VPTVAASLLPLCEAFGSITPTSN---STGDEPSTSIYMAFSLAFLFLI 316
VP VAA+L+PLCEAFGS+TPTSN S GDE SIYM FS AFLFL+
Sbjct: 676 VPEVAAALMPLCEAFGSVTPTSNHKSSMGDE--LSIYMVFSSAFLFLL 721
>XP_010653098.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Vitis vinifera]
Length = 1330
Score = 139 bits (350), Expect = 4e-36
Identities = 73/108 (67%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGW IQEHVVH +VKLL+ P+P + +GTRS +D + MLSA+L GAS +DTV ILSLHGV
Sbjct: 614 RGWNIQEHVVHSMVKLLSPPIPPNFTGTRSHLIDYLPMLSAILFGASSIDTVHILSLHGV 673
Query: 182 VPTVAASLLPLCEAFGSITPTSN---STGDEPSTSIYMAFSLAFLFLI 316
VP VAA+L+PLCEAFGS+TPTSN S GDE SIYM FS AFLFL+
Sbjct: 674 VPEVAAALMPLCEAFGSVTPTSNHKSSMGDE--LSIYMVFSSAFLFLL 719
>XP_002264843.2 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Vitis vinifera]
Length = 1332
Score = 139 bits (350), Expect = 4e-36
Identities = 73/108 (67%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
Frame = +2
Query: 2 RGWYIQEHVVHYVVKLLASPVPHSHSGTRSLYVDNMSMLSAVLRGASCVDTVQILSLHGV 181
RGW IQEHVVH +VKLL+ P+P + +GTRS +D + MLSA+L GAS +DTV ILSLHGV
Sbjct: 616 RGWNIQEHVVHSMVKLLSPPIPPNFTGTRSHLIDYLPMLSAILFGASSIDTVHILSLHGV 675
Query: 182 VPTVAASLLPLCEAFGSITPTSN---STGDEPSTSIYMAFSLAFLFLI 316
VP VAA+L+PLCEAFGS+TPTSN S GDE SIYM FS AFLFL+
Sbjct: 676 VPEVAAALMPLCEAFGSVTPTSNHKSSMGDE--LSIYMVFSSAFLFLL 721