BLASTX nr result
ID: Glycyrrhiza28_contig00032700
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00032700
(240 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_062653945.1 type IV secretion system protein VirB3 [Rhizobium... 93 9e-23
WP_007823591.1 type IV secretion protein VirB3 [Rhizobium sp. CF... 88 6e-21
SCB49394.1 type IV secretion system protein VirB3 [Rhizobium mil... 88 8e-21
WP_040112763.1 type IV secretion protein VirB3 [Rhizobium etli] ... 86 5e-20
WP_047635194.1 type IV secretion protein VirB3 [Rhizobium tropic... 85 9e-20
WP_064813121.1 MULTISPECIES: type IV secretion system protein Vi... 85 1e-19
WP_004123788.1 T4SS VirB3 [Rhizobium freirei] ENN85546.1 T4SS Vi... 85 1e-19
WP_064245707.1 type IV secretion system protein VirB3 [Rhizobium... 84 2e-19
WP_027686130.1 type IV secretion protein VirB3 [Rhizobium legumi... 84 3e-19
WP_003595198.1 type IV secretion protein VirB3 [Rhizobium legumi... 84 4e-19
WP_014763652.1 type IV secretion protein VirB3 [Sinorhizobium fr... 83 6e-19
WP_014857963.1 MULTISPECIES: type IV secretion protein VirB3 [Si... 83 6e-19
WP_064842577.1 type IV secretion system protein VirB3 [Rhizobium... 83 8e-19
WP_010068249.1 MULTISPECIES: type IV secretion protein VirB3 [Rh... 83 8e-19
WP_069461258.1 type IV secretion system protein VirB3 [Ensifer s... 83 8e-19
SCB45558.1 type IV secretion system protein VirB3 [Rhizobium lus... 82 1e-18
WP_047639517.1 type IV secretion protein VirB3 [Rhizobium tropici] 82 1e-18
WP_040111789.1 type IV secretion protein VirB3 [Rhizobium etli] ... 82 1e-18
WP_037190867.1 type IV secretion protein VirB3 [Rhizobium sp. OK... 82 1e-18
WP_034512548.1 type IV secretion protein VirB3 [Agrobacterium rh... 82 1e-18
>WP_062653945.1 type IV secretion system protein VirB3 [Rhizobium sp. Root651]
KRA62195.1 type IV secretion system protein VirB3
[Rhizobium sp. Root651]
Length = 112
Score = 92.8 bits (229), Expect = 9e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA
Sbjct: 69 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 112
>WP_007823591.1 type IV secretion protein VirB3 [Rhizobium sp. CF142] EJJ26219.1
type IV secretory pathway, VirB3 component [Rhizobium
sp. CF142]
Length = 112
Score = 88.2 bits (217), Expect = 6e-21
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRNA+YWGGATLSPLKLVRRYDERDLSLA
Sbjct: 69 NMFRILLAWIETRGRSRNASYWGGATLSPLKLVRRYDERDLSLA 112
>SCB49394.1 type IV secretion system protein VirB3 [Rhizobium miluonense]
Length = 112
Score = 87.8 bits (216), Expect = 8e-21
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRIL+AWV TRGRSRNA+YWGGATLSPLKLVRRYDERDLSLA
Sbjct: 69 NMFRILIAWVETRGRSRNASYWGGATLSPLKLVRRYDERDLSLA 112
>WP_040112763.1 type IV secretion protein VirB3 [Rhizobium etli] AJC83433.1 type IV
secretion system protein VirB3 2 (plasmid) [Rhizobium
etli bv. phaseoli str. IE4803]
Length = 112
Score = 85.9 bits (211), Expect = 5e-20
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRIL+AW+ TRGRSRNA+YWGGATLSPLKLVRRYDERD SLA
Sbjct: 69 NMFRILIAWIETRGRSRNASYWGGATLSPLKLVRRYDERDFSLA 112
>WP_047635194.1 type IV secretion protein VirB3 [Rhizobium tropici] OJY70716.1 type
IV secretion system protein VirB3 [Rhizobium sp. 60-20]
Length = 112
Score = 85.1 bits (209), Expect = 9e-20
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRNA+YWGGATLSPLKLVR YDERDLSLA
Sbjct: 69 NMFRILLAWIETRGRSRNASYWGGATLSPLKLVRCYDERDLSLA 112
>WP_064813121.1 MULTISPECIES: type IV secretion system protein VirB3 [Rhizobium]
ANK95544.1 type IV secretion system protein VirB3 2
(plasmid) [Rhizobium sp. N6212] ANL01596.1 type IV
secretion system protein VirB3 2 (plasmid) [Rhizobium
sp. N621] ANL07724.1 type IV secretion system protein
VirB3 2 (plasmid) [Rhizobium etli] ANL13895.1 type IV
secretion system protein VirB3 2 (plasmid) [Rhizobium
sp. N1341] ANL25879.1 type IV secretion system protein
VirB3 2 (plasmid) [Rhizobium sp. N113] ANM38565.1 type
IV secretion system protein VirB3 2 (plasmid) [Rhizobium
sp. N871] ANM44720.1 type IV secretion system protein
VirB3 2 (plasmid) [Rhizobium sp. N741]
Length = 112
Score = 84.7 bits (208), Expect = 1e-19
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
N FRILLAW+ TRGRSRNAAYWGGATLSPLKL+RRYDER+LSLA
Sbjct: 69 NKFRILLAWIETRGRSRNAAYWGGATLSPLKLIRRYDERNLSLA 112
>WP_004123788.1 T4SS VirB3 [Rhizobium freirei] ENN85546.1 T4SS VirB3 [Rhizobium
freirei PRF 81]
Length = 112
Score = 84.7 bits (208), Expect = 1e-19
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRN YWGGATLSPLKL RRYDERDLSLA
Sbjct: 69 NMFRILLAWIETRGRSRNTTYWGGATLSPLKLTRRYDERDLSLA 112
>WP_064245707.1 type IV secretion system protein VirB3 [Rhizobium leguminosarum]
OAP96481.1 type IV secretion system protein VirB3
[Rhizobium leguminosarum]
Length = 112
Score = 84.3 bits (207), Expect = 2e-19
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRIL++W+ TRGRSRN AYWGGATLSPLKL RRYDERDLSLA
Sbjct: 69 NMFRILISWIETRGRSRNTAYWGGATLSPLKLTRRYDERDLSLA 112
>WP_027686130.1 type IV secretion protein VirB3 [Rhizobium leguminosarum]
Length = 112
Score = 84.0 bits (206), Expect = 3e-19
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRIL++W+ TRGRSRNAAYWGGATLSPL L+RRYDERDLSLA
Sbjct: 69 NMFRILISWIETRGRSRNAAYWGGATLSPLILIRRYDERDLSLA 112
>WP_003595198.1 type IV secretion protein VirB3 [Rhizobium leguminosarum]
EJB01720.1 type IV secretory pathway, VirB3 component
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 112
Score = 83.6 bits (205), Expect = 4e-19
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRIL++W+ TRGRSRN AYWGGATLSPL LVRRYDERDLSLA
Sbjct: 69 NMFRILISWIETRGRSRNTAYWGGATLSPLTLVRRYDERDLSLA 112
>WP_014763652.1 type IV secretion protein VirB3 [Sinorhizobium fredii] AFL51490.1
type IV secretion system protein VirB3 [Sinorhizobium
fredii USDA 257]
Length = 113
Score = 83.2 bits (204), Expect = 6e-19
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAWV TRGRSRN+AYWGGATL+PLKL R+YDERDL LA
Sbjct: 70 NMFRILLAWVETRGRSRNSAYWGGATLAPLKLARKYDERDLGLA 113
>WP_014857963.1 MULTISPECIES: type IV secretion protein VirB3
[Sinorhizobium/Ensifer group] CCE99167.1 hypothetical
protein SFHH103_04694 (plasmid) [Sinorhizobium fredii
HH103] AFL54884.1 type IV secretion system protein VirB3
(plasmid) [Sinorhizobium fredii USDA 257] CEO91853.1
Type IV secretory pathway, VirB3 (plasmid)
[Sinorhizobium fredii HH103] KSV90063.1 type IV
secretion protein VirB3 [Sinorhizobium fredii USDA 205]
OAP35582.1 type IV secretion system protein VirB3
[Ensifer glycinis]
Length = 113
Score = 83.2 bits (204), Expect = 6e-19
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAWV TRGRSRN+AYWGGATL+PLKL R+YDERDL LA
Sbjct: 70 NMFRILLAWVETRGRSRNSAYWGGATLAPLKLARKYDERDLGLA 113
>WP_064842577.1 type IV secretion system protein VirB3 [Rhizobium sp. N324]
ANM13678.1 type IV secretion system protein VirB3
(plasmid) [Rhizobium sp. N324]
Length = 112
Score = 82.8 bits (203), Expect = 8e-19
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLS 114
NMFRIL+AW+ TRGRSRNAAYWGGATLSPL L+RRYDERDLS
Sbjct: 69 NMFRILIAWIETRGRSRNAAYWGGATLSPLALIRRYDERDLS 110
>WP_010068249.1 MULTISPECIES: type IV secretion protein VirB3 [Rhizobium]
ACE93873.1 transport secretion system IV protein, VirB3
(plasmid) [Rhizobium etli CIAT 652] ANM06933.1 type IV
secretion system protein VirB3 1 (plasmid) [Rhizobium
phaseoli] OHV22794.1 type IV secretion system protein
VirB3 [Rhizobium sp. RSm-3]
Length = 112
Score = 82.8 bits (203), Expect = 8e-19
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLS 114
NMFRIL+AW+ TRGRSRNAAYWGGATLSPL L+RRYDERDLS
Sbjct: 69 NMFRILIAWIETRGRSRNAAYWGGATLSPLALIRRYDERDLS 110
>WP_069461258.1 type IV secretion system protein VirB3 [Ensifer sp. YIC4027]
ODR88402.1 type IV secretion system protein VirB3
[Ensifer sp. YIC4027]
Length = 113
Score = 82.8 bits (203), Expect = 8e-19
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAWV TRGRSRN+AYWGGATLSPLKL R+YDERDL A
Sbjct: 70 NMFRILLAWVETRGRSRNSAYWGGATLSPLKLARKYDERDLGFA 113
>SCB45558.1 type IV secretion system protein VirB3 [Rhizobium lusitanum]
Length = 112
Score = 82.4 bits (202), Expect = 1e-18
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRN AYWGGA+L+PL+LVRRYDERDL LA
Sbjct: 69 NMFRILLAWIETRGRSRNGAYWGGASLTPLRLVRRYDERDLGLA 112
>WP_047639517.1 type IV secretion protein VirB3 [Rhizobium tropici]
Length = 112
Score = 82.4 bits (202), Expect = 1e-18
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRN AYWGGA+L+PL+LVRRYDERDL LA
Sbjct: 69 NMFRILLAWIETRGRSRNGAYWGGASLTPLRLVRRYDERDLGLA 112
>WP_040111789.1 type IV secretion protein VirB3 [Rhizobium etli] AJC82296.1 type IV
secretion system protein VirB3 1 (plasmid) [Rhizobium
etli bv. phaseoli str. IE4803]
Length = 112
Score = 82.4 bits (202), Expect = 1e-18
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLS 114
NMFRIL+AW+ TRGRSRN AYWGGATLSPLKL RRYDERDLS
Sbjct: 69 NMFRILIAWIETRGRSRNTAYWGGATLSPLKLTRRYDERDLS 110
>WP_037190867.1 type IV secretion protein VirB3 [Rhizobium sp. OK494]
Length = 112
Score = 82.4 bits (202), Expect = 1e-18
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRN AYWGGA+L+PL+LVRRYDERDL LA
Sbjct: 69 NMFRILLAWIETRGRSRNGAYWGGASLTPLRLVRRYDERDLGLA 112
>WP_034512548.1 type IV secretion protein VirB3 [Agrobacterium rhizogenes]
Length = 112
Score = 82.4 bits (202), Expect = 1e-18
Identities = 37/44 (84%), Positives = 41/44 (93%)
Frame = -2
Query: 239 NMFRILLAWVGTRGRSRNAAYWGGATLSPLKLVRRYDERDLSLA 108
NMFRILLAW+ TRGRSRN AYWGGA+L+PL+LVRRYDERDL LA
Sbjct: 69 NMFRILLAWIETRGRSRNGAYWGGASLTPLRLVRRYDERDLGLA 112