BLASTX nr result

ID: Glycyrrhiza28_contig00032337 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00032337
         (380 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004500422.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 is...    75   3e-13
XP_004500421.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 is...    75   3e-13
GAU18583.1 hypothetical protein TSUD_124140 [Trifolium subterran...    67   1e-10
XP_013460526.1 plant organelle RNA recognition domain protein [M...    64   2e-09
XP_013460525.1 plant organelle RNA recognition domain protein [M...    64   2e-09

>XP_004500422.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cicer
           arietinum]
          Length = 398

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +2

Query: 215 MSNRVWKKMGLLTVMGSHIMNLLSKHKQQHVLCVSVFVRSKTTSSQYVETRARDP 379
           MSNRV  K  LLT MG+HI+N L+KHKQQ   CVS  +RSKTTS QYVE+RARDP
Sbjct: 1   MSNRVCMKKWLLTAMGTHIVNFLTKHKQQQAFCVS--IRSKTTSIQYVESRARDP 53


>XP_004500421.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cicer
           arietinum]
          Length = 422

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +2

Query: 215 MSNRVWKKMGLLTVMGSHIMNLLSKHKQQHVLCVSVFVRSKTTSSQYVETRARDP 379
           MSNRV  K  LLT MG+HI+N L+KHKQQ   CVS  +RSKTTS QYVE+RARDP
Sbjct: 1   MSNRVCMKKWLLTAMGTHIVNFLTKHKQQQAFCVS--IRSKTTSIQYVESRARDP 53


>GAU18583.1 hypothetical protein TSUD_124140 [Trifolium subterraneum]
          Length = 424

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +2

Query: 215 MSNRVWKKMGLLTVMGSHIMNLLSKHKQQHVLCVSVFVRSKTTSSQYVETRARD 376
           MS RV+ K  L++VMG+HI+N L+KHKQQ  L VS+ +RSKTTS Q VE RARD
Sbjct: 1   MSTRVFMKNRLMSVMGTHILNFLTKHKQQQSLFVSINIRSKTTSVQSVELRARD 54


>XP_013460526.1 plant organelle RNA recognition domain protein [Medicago
           truncatula] KEH34560.1 plant organelle RNA recognition
           domain protein [Medicago truncatula]
          Length = 401

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
 Frame = +2

Query: 215 MSNRVWKKMGLLTVMGSHIMNLLSKHK---QQHVLCVSVFVRSKTTSSQYVETRARDP 379
           MS+RV+ K   LT MG+HI+N L++HK   QQ  LCV  FVRSKTTS QYV +RARDP
Sbjct: 1   MSHRVFMKKRSLTQMGTHIVNFLTQHKHQNQQQPLCV--FVRSKTTSIQYVNSRARDP 56


>XP_013460525.1 plant organelle RNA recognition domain protein [Medicago
           truncatula] KEH34559.1 plant organelle RNA recognition
           domain protein [Medicago truncatula]
          Length = 425

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
 Frame = +2

Query: 215 MSNRVWKKMGLLTVMGSHIMNLLSKHK---QQHVLCVSVFVRSKTTSSQYVETRARDP 379
           MS+RV+ K   LT MG+HI+N L++HK   QQ  LCV  FVRSKTTS QYV +RARDP
Sbjct: 1   MSHRVFMKKRSLTQMGTHIVNFLTQHKHQNQQQPLCV--FVRSKTTSIQYVNSRARDP 56


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