BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00031623
         (1601 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP42564.1 Retrovirus-related Pol polyprotein from transposon TN...   235   e-149
KYP64431.1 Retrovirus-related Pol polyprotein from transposon TN...   241   e-149
KYP68601.1 Retrovirus-related Pol polyprotein from transposon TN...   221   e-144
KYP61022.1 Retrovirus-related Pol polyprotein from transposon TN...   232   e-137
KYP34293.1 Retrovirus-related Pol polyprotein from transposon TN...   226   e-136
KYP67096.1 Retrovirus-related Pol polyprotein from transposon TN...   232   e-135
KYP55668.1 Retrovirus-related Pol polyprotein from transposon TN...   223   e-134
KHN01991.1 Retrovirus-related Pol polyprotein from transposon TN...   222   e-133
KYP70921.1 Retrovirus-related Pol polyprotein from transposon TN...   221   e-132
KYP36406.1 Retrovirus-related Pol polyprotein from transposon TN...   234   e-131
XP_017423424.1 PREDICTED: uncharacterized protein LOC108332614 [...   200   e-129
KYP64985.1 Retrovirus-related Pol polyprotein from transposon TN...   227   e-127
KYP65734.1 Retrovirus-related Pol polyprotein from transposon TN...   231   e-126
KYP68426.1 Retrovirus-related Pol polyprotein from transposon TN...   209   e-124
KYP43110.1 Retrovirus-related Pol polyprotein from transposon TN...   209   e-124
KYP37906.1 Retrovirus-related Pol polyprotein from transposon TN...   214   e-123
GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterran...   229   e-122
KYP34298.1 Retrovirus-related Pol polyprotein from transposon TN...   212   e-122
KYP70315.1 Retrovirus-related Pol polyprotein from transposon TN...   192   e-121
CAN65820.1 hypothetical protein VITISV_042324 [Vitis vinifera]        228   e-121

>KYP42564.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  235 bits (599), Expect(3) = e-149
 Identities = 127/269 (47%), Positives = 172/269 (63%), Gaps = 13/269 (4%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMH--TPVHDQVHQPDIHDDL--- 996
            +LG + GTKG+++ DL TR IF+SRN +FYE  FP+     T + +   Q D   D    
Sbjct: 737  YLGVKQGTKGFLVLDLLTRSIFVSRNVVFYEHIFPFFEKGSTVITNSQQQNDACFDFLYL 796

Query: 997  -DSAFIFDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTI----VRKSKRVRKAPTYLKD 1161
              S+      DNS  L  +++   +    +    HP  T     +RKS R + +P YLKD
Sbjct: 797  DSSSHPVTTIDNSSLLDIDSAHYENDLNDIDESAHPSETSSPSQLRKSTRHKCSPAYLKD 856

Query: 1162 FHCNSLSSL---KSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWI 1332
            +HCN L  +   +     YPL  VLSY+ +S  +  ++ SITT  EP+T+NQA++   W+
Sbjct: 857  YHCNLLIGVPPPEDKHIRYPLNTVLSYDSLSASYSRYVLSITTHVEPHTFNQAVKNKVWV 916

Query: 1333 EAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIE 1512
            EAM +EL AL  N TW+I  LPPGKTPIG KWV+KIK+ SDGSIERYKARLV KGYTQI+
Sbjct: 917  EAMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQ 976

Query: 1513 GMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            G+D+F+TF+PVAK +T+R+LLA+AS Q W
Sbjct: 977  GLDYFDTFAPVAKLSTVRMLLAIASCQHW 1005



 Score =  228 bits (582), Expect(3) = e-149
 Identities = 101/161 (62%), Positives = 126/161 (78%)
 Frame = +2

Query: 89  FDTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDL 268
           FD WH+RLGHPS  VLQ V  +FPYVT+NKN+ CD CH+ KQ +L F  +   ++ CFDL
Sbjct: 488 FDLWHYRLGHPSHVVLQTVKRLFPYVTYNKNITCDYCHFGKQARLPFPTSTTKSLSCFDL 547

Query: 269 LHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAK 448
           +HMDIWGP+ IPS+ GH YFLTIVDD+SR TW++ MK+KGETR+ I+N I+Y+QTQF+  
Sbjct: 548 VHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWIYFMKSKGETRNLIQNFISYVQTQFTKH 607

Query: 449 IKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           IK +RSDNG EF M    A+ GI+HQ SCVETPQQNS+VER
Sbjct: 608 IKVLRSDNGVEFAMDQLYATYGIVHQTSCVETPQQNSVVER 648



 Score =  118 bits (296), Expect(3) = e-149
 Identities = 53/98 (54%), Positives = 71/98 (72%)
 Frame = +3

Query: 549 NKIP*LKDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQ 728
           N +   K RH+LN+TR+LLFHS +P+ FW YAV HA  +INRLP+P L   SP++++Y +
Sbjct: 643 NSVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQMLYDK 702

Query: 729 PPTYTDLKVFGCLAYASTLTQNRNKLDPRARKCIFFRI 842
           PPT  DLKVFG L YASTL Q R+KL P+A K ++  +
Sbjct: 703 PPTLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGV 740


>KYP64431.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 812

 Score =  241 bits (614), Expect(3) = e-149
 Identities = 127/260 (48%), Positives = 168/260 (64%), Gaps = 4/260 (1%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYES-EFPYTMHTPVHDQVHQPDIHDDLDSAF 1008
            FLGF+PGTKGY++FDL TR+I ISRN +FY + + P + HT                   
Sbjct: 395  FLGFKPGTKGYIVFDLQTREISISRNVIFYSTYQVPSSSHT------------------- 435

Query: 1009 IFDFPDNSLTL-QPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFHCNSLSS 1185
                P+ S+T  +P +SP   P   L           R+S+R+   PTYLKDFH N L+S
Sbjct: 436  ---MPNQSVTTSRPAHSPQQSPPLPL-----------RRSQRIPFPPTYLKDFHYNFLTS 481

Query: 1186 LKSAST--LYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSELQA 1359
                S    +PL  V++YN +S  HLH++ S++T EEP  Y+QA++   W+ AM +E+ A
Sbjct: 482  SPELSKGISHPLSSVINYNTLSSSHLHYVLSLSTHEEPKFYHQAVKSQEWVVAMKAEIDA 541

Query: 1360 LHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDFFETFS 1539
            L  N TW+I DLP GK PIGCKWV+KIK+ SDGS+ERYKARLVAKG+TQ EG+D+FET +
Sbjct: 542  LTANNTWTIVDLPSGKHPIGCKWVYKIKYRSDGSVERYKARLVAKGFTQTEGLDYFETCA 601

Query: 1540 PVAKATTIRLLLAMASTQKW 1599
            PV K TT+RLLLA+AS+Q W
Sbjct: 602  PVEKLTTVRLLLAVASSQNW 621



 Score =  214 bits (546), Expect(3) = e-149
 Identities = 105/178 (58%), Positives = 129/178 (72%)
 Frame = +2

Query: 38  SLAAKCPDVNSLNKSDFFDTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQT 217
           S+ AK P V       FFD WHFRLGHPSI VLQ++   F ++ F+   +CD CH AKQ+
Sbjct: 135 SIIAKNPTV------PFFDLWHFRLGHPSILVLQNICKHFLFIKFDSMKVCDYCHLAKQS 188

Query: 218 KLRFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETR 397
           KL F    H +   FDL+H+DIWGP+ I S+QGH YFLTIVDD +R TWLFLMK+K ETR
Sbjct: 189 KLPFPPGIHKSSAPFDLIHIDIWGPLAISSIQGHKYFLTIVDDFTRHTWLFLMKSKHETR 248

Query: 398 DCIKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
             +KN IT +QTQF+ +IK +R+DNG EF+MSS    LGIIHQ SCVETPQQN++VER
Sbjct: 249 ILVKNFITLVQTQFNKRIKILRTDNGLEFSMSSIYQDLGIIHQTSCVETPQQNAVVER 306



 Score =  125 bits (315), Expect(3) = e-149
 Identities = 56/89 (62%), Positives = 70/89 (78%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+LNVTRSLLFHSKLP+ FWS+AV+HA F INRLP+P L   SPF+++Y   P   D
Sbjct: 307 KHKHILNVTRSLLFHSKLPKSFWSFAVNHAVFFINRLPSPVLNQLSPFQLLYNTKPNLND 366

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+ FG L +ASTL Q+R KLDPRA+KC+F
Sbjct: 367 LRFFGSLCFASTLQQHRTKLDPRAKKCLF 395


>KYP68601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 549

 Score =  221 bits (564), Expect(3) = e-144
 Identities = 114/242 (47%), Positives = 151/242 (62%), Gaps = 2/242 (0%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLGF+PGTKGY++FDL TR+I ISRN        P                         
Sbjct: 335  FLGFKPGTKGYIVFDLQTREISISRNQQISHEPSP------------------------T 370

Query: 1012 FDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFHCNSLSSLK 1191
            +  P +S T+  ++   P PA    S   P    +R+S+R+   PTYLKDFHCN L+S  
Sbjct: 371  YQVPSSSHTMPNQSVTTPRPAH---SPQQPPPLPLRRSQRIPFPPTYLKDFHCNFLTSSP 427

Query: 1192 SAST--LYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSELQALH 1365
              S    +P+  V++YN +S  HLH++ S++T EEP  Y+QA++   W+ AM +E+ AL 
Sbjct: 428  QLSKGISHPISSVINYNTLSSSHLHYVLSLSTHEEPKFYHQAVKLQEWVVAMKAEIDALT 487

Query: 1366 QNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDFFETFSPV 1545
             N TW+I DLP GK PIGCKWV+KIK+ SDGS+ERYKARLVAKG+TQ EG+D+FETF+PV
Sbjct: 488  ANNTWTIVDLPSGKHPIGCKWVYKIKYRSDGSVERYKARLVAKGFTQTEGLDYFETFAPV 547

Query: 1546 AK 1551
            AK
Sbjct: 548  AK 549



 Score =  218 bits (556), Expect(3) = e-144
 Identities = 106/178 (59%), Positives = 130/178 (73%)
 Frame = +2

Query: 38  SLAAKCPDVNSLNKSDFFDTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQT 217
           S+ AK P V       FFD WHFRLGHPSI VLQ++   FP++ F+   +CD CH AKQ+
Sbjct: 75  SIIAKKPTV------PFFDLWHFRLGHPSILVLQNICKHFPFIKFDSMKVCDYCHLAKQS 128

Query: 218 KLRFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETR 397
           KL F    H +   FDL+H+DIWGP+ I S+QGH YFLTIVDD +R TWLFLMK+K ETR
Sbjct: 129 KLPFPPGIHKSSAPFDLIHIDIWGPLAISSIQGHKYFLTIVDDFTRHTWLFLMKSKHETR 188

Query: 398 DCIKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
             +KN IT +QTQF+ +IK +R+DNG EF+MSS    LGIIHQ SCVETPQQN++VER
Sbjct: 189 ILVKNFITLVQTQFNKRIKILRTDNGLEFSMSSIYQDLGIIHQTSCVETPQQNAVVER 246



 Score =  125 bits (315), Expect(3) = e-144
 Identities = 56/89 (62%), Positives = 70/89 (78%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+LNVTRSLLFHSKLP+ FWS+AV+HA F INRLP+P L   SPF+++Y   P   D
Sbjct: 247 KHKHILNVTRSLLFHSKLPKSFWSFAVNHAVFFINRLPSPVLNQLSPFQLLYNTKPNLND 306

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+ FG L +ASTL Q+R KLDPRA+KC+F
Sbjct: 307 LRFFGSLCFASTLQQHRTKLDPRAKKCLF 335


>KYP61022.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  232 bits (591), Expect(3) = e-137
 Identities = 118/260 (45%), Positives = 166/260 (63%), Gaps = 4/260 (1%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLGF+P TKGY+LF+LHT  + +SRN LF+E  FP         + H P     +   + 
Sbjct: 658  FLGFKPHTKGYLLFNLHTHGLLVSRNVLFHEDHFPS------FTKPHSPSFSSPVPIHYN 711

Query: 1012 F-DFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFH---CNSL 1179
            + D+P    +   E+S PP       SD H     +R+S R R+ PTYL+DFH    ++ 
Sbjct: 712  YVDYPTFPSSSIVESSDPPT------SDQHSSPPPLRRSTRPRRPPTYLQDFHGAFTSTS 765

Query: 1180 SSLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSELQA 1359
            ++  S    +PL   LSY+ +SP   H++ SI++  EP  + +A +   W++AM+ E+ A
Sbjct: 766  TAHSSTGIRHPLHSFLSYDLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFA 825

Query: 1360 LHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDFFETFS 1539
            L  N TW +T LPP KT IGC+WV+K+KH +DGSI+RYKARLVAKGYTQ+EG+DFF+TFS
Sbjct: 826  LEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFS 885

Query: 1540 PVAKATTIRLLLAMASTQKW 1599
            PVAK TT+RLLL++A+   W
Sbjct: 886  PVAKLTTVRLLLSLAAINNW 905



 Score =  194 bits (494), Expect(3) = e-137
 Identities = 93/160 (58%), Positives = 115/160 (71%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLL 271
           D WHFR+GH S   LQ     FP+++ + +  C++CH+AKQ KL F  ++  A   FDLL
Sbjct: 414 DLWHFRMGHLSHERLQS----FPFLSVDTSFSCNTCHHAKQKKLPFPLSHSYASQPFDLL 469

Query: 272 HMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKI 451
           HMDIWGP  + SM GH YFLTIVDDH+RFTWLFLM+NK ETR  I N I  ++TQF   +
Sbjct: 470 HMDIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHV 529

Query: 452 KSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           K IR+DNG EF+M+ Y +S GIIHQ +CVETPQQN IVER
Sbjct: 530 KVIRTDNGLEFSMTQYFSSKGIIHQTTCVETPQQNGIVER 569



 Score =  113 bits (282), Expect(3) = e-137
 Identities = 54/89 (60%), Positives = 65/89 (73%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +HLLNVTRSLLF + LP  FW +A+ HATF+IN +PTP L   SPFE +YG P   + 
Sbjct: 570 KHQHLLNVTRSLLFQANLPSIFWCFALMHATFLINCIPTPFLHNISPFEKLYGHPCDISI 629

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L VFGCL Y+ST+T +R KLDPRA  CIF
Sbjct: 630 LCVFGCLCYSSTITSHRTKLDPRAHPCIF 658


>KYP34293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  226 bits (575), Expect(3) = e-136
 Identities = 125/286 (43%), Positives = 176/286 (61%), Gaps = 30/286 (10%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFP------------------YTMHTPV 957
            FLGF P TKGY+ +DLHTR I ISRN  FYE+ FP                  + +H+P 
Sbjct: 694  FLGFSPTTKGYITYDLHTRAITISRNVSFYENHFPLLQSTSSTSNIPVVSPISFGIHSPS 753

Query: 958  HDQVH-QPDIHD-DLDSAFIFDFPDNSLTLQP----ENSPPPDPAPCLGSDVHPEVTIVR 1119
            HD +   PD H  ++ S        +S++L P     +S PP+ +P            +R
Sbjct: 754  HDLISILPDPHQHNVTSPNPATTSHDSISLAPYSTTADSLPPNSSP------------LR 801

Query: 1120 KSKRVRKAPTYLKDFHCNSLSSLKSAST------LYPLFDVLSYNHISPHHLHFINSITT 1281
            +S R+R  P+YL+D+H     SL S ST      LYP+   +SY+ +S     F++SI+ 
Sbjct: 802  RSTRLRNPPSYLQDYH----HSLTSTSTNLHPGMLYPIEKYISYSRLSNDFQAFVSSISA 857

Query: 1282 AEEPNTYNQAIQFPHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGS 1461
              EP++Y +A +   W++AM++EL+AL  N TW++T LPP K  +GC+W++KIK+N+DGS
Sbjct: 858  VSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGS 917

Query: 1462 IERYKARLVAKGYTQIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            IERYKARLVAKGYTQ+EG+D+  TFSPVAK TT+RLLLA+A+   W
Sbjct: 918  IERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDW 963



 Score =  186 bits (472), Expect(3) = e-136
 Identities = 90/182 (49%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
 Frame = +2

Query: 29  HSVSLAAKCPDVNSLNKSDFFDTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYA 208
           HS  +  KC  +         D WHFRLGH S T L ++  ++P +T NK+  C+ CHYA
Sbjct: 431 HSTIIHPKCDVIP-------IDLWHFRLGHLSNTRLHNMQQLYPCLTINKDFTCNICHYA 483

Query: 209 KQTKLRFAHNNHIAMHCFDLLHMDIWGPIG-IPSMQGHHYFLTIVDDHSRFTWLFLMKNK 385
           KQ KL F+ ++  A   F LLHMDIWGP   I S+ GH +F TIVDD++ FTW+FLM NK
Sbjct: 484 KQRKLSFSSSHSTASRPFSLLHMDIWGPYSCISSIHGHKFFFTIVDDNTHFTWIFLMINK 543

Query: 386 GETRDCIKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIV 565
            ETR  I N I  I+ QF+ +I++I++DNG EF M ++  S GI+HQ +C+ETPQQN +V
Sbjct: 544 SETRMHISNFINLIENQFNTRIQTIQTDNGAEFLMQNFFNSKGIVHQTTCIETPQQNGVV 603

Query: 566 ER 571
           ER
Sbjct: 604 ER 605



 Score =  126 bits (316), Expect(3) = e-136
 Identities = 57/89 (64%), Positives = 69/89 (77%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +HLLNVT +LLFHSKLP CFWSYA+ HAT++INR+ TP L  K+PF+ +YGQ    T+
Sbjct: 606 KHQHLLNVTHALLFHSKLPYCFWSYALLHATYLINRITTPLLDNKTPFQKLYGQTCDITE 665

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+VFGCL Y ST T NR KLDPRA  C+F
Sbjct: 666 LRVFGCLCYVSTSTANRKKLDPRAHPCVF 694


>KYP67096.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 850

 Score =  232 bits (592), Expect(3) = e-135
 Identities = 129/268 (48%), Positives = 165/268 (61%), Gaps = 12/268 (4%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTM--HTPVHDQVHQPDIHDDLDSA 1005
            FLG++ GTKG VL+DL TR+IFISR+ LFYE  FP     +    D  HQ  +     S 
Sbjct: 268  FLGYKDGTKGCVLYDLKTREIFISRDVLFYEQNFPMLEKHNQQSKDNEHQTQVPSIQQSF 327

Query: 1006 FIFD-FPDNSLTLQPENSPPPDPAPCLGSDVHPE------VTIVRKSKRVRKAPTYLKDF 1164
            F  D F  ++  +   N P       L ++   +       T VR S+R R+ P+YLKD+
Sbjct: 328  FANDLFHLDNENVFHTNEPALTHIDGLNNNNQVQQVDNNHYTAVRHSQRERRPPSYLKDY 387

Query: 1165 HCNSL---SSLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIE 1335
            HC      SS    +  YP+   LSYN++S  H  +I SI++  EP T+ +A+Q   W  
Sbjct: 388  HCTLATTGSSSNHPTVRYPISSCLSYNNLSSSHKQYIFSISSISEPKTFEEAVQHSCWRN 447

Query: 1336 AMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEG 1515
            A+N ELQAL +N TW +T LPPGK  I CKWVFK+KH SDGSIER+KARLVAKG+TQ EG
Sbjct: 448  AINDELQALDKNQTWILTSLPPGKKLIKCKWVFKVKHYSDGSIERHKARLVAKGFTQTEG 507

Query: 1516 MDFFETFSPVAKATTIRLLLAMASTQKW 1599
            +DF ETFSPV K TTIRLLL++AS   W
Sbjct: 508  IDFMETFSPVVKMTTIRLLLSIASASNW 535



 Score =  190 bits (483), Expect(3) = e-135
 Identities = 88/177 (49%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
 Frame = +2

Query: 56  PDVNSLNKSDFF----DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLI-CDSCHYAKQTK 220
           P++   + ++F+    D WH RLGHPS   L ++  ++P+V FNK+ + C+ CH AKQ +
Sbjct: 3   PEIFEKSVNNFYSHNNDVWHLRLGHPSHEKLGNIQTMYPFVKFNKDKVPCEVCHLAKQKR 62

Query: 221 LRFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRD 400
           L FA++++   + FDL+H+DIWGP+ IPS+ GH YFLTIV++++R TW++ MK K ET  
Sbjct: 63  LPFAYSSNTCDNVFDLIHIDIWGPLSIPSIFGHKYFLTIVENNARHTWIYFMKQKSETAS 122

Query: 401 CIKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
            I+  +   QTQF+ KIK IR+DNG EFNM  +    GI+HQ SCVETPQQN IVER
Sbjct: 123 LIQAFVAQTQTQFNKKIKIIRTDNGREFNMHEWFKDKGILHQTSCVETPQQNGIVER 179



 Score =  110 bits (275), Expect(3) = e-135
 Identities = 49/89 (55%), Positives = 68/89 (76%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+L + R+L+F S +P+ FW++AV+HA F+INRLPT  LK KSP++I++ + P  + 
Sbjct: 180 KHQHILGIARALIFQSGIPKSFWNHAVNHAVFLINRLPTRFLKGKSPYQILHDKLPDISY 239

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           LK FGCL +AST+  NR KLD RARKCIF
Sbjct: 240 LKTFGCLCFASTIHSNRTKLDERARKCIF 268


>KYP55668.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1136

 Score =  223 bits (567), Expect(3) = e-134
 Identities = 114/254 (44%), Positives = 164/254 (64%), Gaps = 2/254 (0%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLGF+P TKGY+L +LHT  + +S+N +F+E  FP    T  +       +    + A  
Sbjct: 479  FLGFKPHTKGYLLVNLHTHGLLVSQNVIFHEDHFP--SFTKPNSPSFSSPVPIPYNYADY 536

Query: 1012 FDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFHCNSLSSLK 1191
              FP +S+    E+S PP P      D H     +R+S R R+ PTYL+DFH    S+  
Sbjct: 537  PSFPSSSIV---ESSEPPPP------DQHSSPPPLRRSTRPRRPPTYLQDFHGAFTSTGP 587

Query: 1192 SAST--LYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSELQALH 1365
             +ST   +PL   +SY+ +SP   H++ SI++  +P  + +A +   W++AM+ E+ AL 
Sbjct: 588  HSSTGIRHPLHSFISYDRLSPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALE 647

Query: 1366 QNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDFFETFSPV 1545
             N TW +T LPP KT IGC+WV+K+KH +DGSI+RYKARLVAKGYTQ+EG+DFF+TFSPV
Sbjct: 648  ANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPV 707

Query: 1546 AKATTIRLLLAMAS 1587
            AK TT+RLL+++A+
Sbjct: 708  AKLTTVRLLISLAA 721



 Score =  198 bits (504), Expect(3) = e-134
 Identities = 92/160 (57%), Positives = 116/160 (72%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLL 271
           D WHFR+GH S   LQ +   FP+++ +K+  C++CH+ KQ KL F  ++  A+  FDLL
Sbjct: 231 DLWHFRMGHLSQERLQLMKQSFPFLSVDKSFSCNTCHHDKQKKLSFPLSHSYALQPFDLL 290

Query: 272 HMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKI 451
           HMDIWGP  + SM GH YFL IVDDH+RFTWLFLM+NK ETR  I N I  ++TQF   +
Sbjct: 291 HMDIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKNV 350

Query: 452 KSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           K IR+DNG EF+M+ Y +S GIIHQ +CVETPQQN IVER
Sbjct: 351 KVIRTDNGLEFSMTQYFSSKGIIHQTTCVETPQQNGIVER 390



 Score =  111 bits (277), Expect(3) = e-134
 Identities = 52/89 (58%), Positives = 64/89 (71%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +HLLNVTRSLLF + LP  FW +A+ HA F+IN +PTP L   SPFE +YG P   + 
Sbjct: 391 KHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLYGHPCDISI 450

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+VFGCL Y+S +T +R KLDPRA  CIF
Sbjct: 451 LRVFGCLCYSSIITSHRTKLDPRAHPCIF 479


>KHN01991.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  222 bits (565), Expect(3) = e-133
 Identities = 126/273 (46%), Positives = 165/273 (60%), Gaps = 17/273 (6%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            F+GF+  TKGY++++LH   I  SRN +FYE  F     T    Q   P+    L  +F 
Sbjct: 649  FIGFKASTKGYLVYNLHLHSIITSRNVVFYEDHFSQIPET----QSSHPESSTILPKSF- 703

Query: 1012 FDFPDNSLTLQPENSPPPDPAPCLGSDVHP-EVTIV-------------RKSKRVRKAPT 1149
                 N     P    PP P     +D  P ++T               R+S R + APT
Sbjct: 704  -----NISPHDPIIEKPPQPVIQETTDHTPLQLTSTDESAFSQRTKHEPRRSTRPKHAPT 758

Query: 1150 YLKDFHCNSLSSLK---SASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQF 1320
            YL+D+H +SLSS     S S+ YPL  VLSY+ +S  H HF+ SI++  EP++Y +A Q+
Sbjct: 759  YLQDYH-HSLSSHDTKVSTSSRYPLSSVLSYSRLSHTHKHFVMSISSTVEPSSYAEASQY 817

Query: 1321 PHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGY 1500
              WI+AM +ELQAL  N TW +T LPP KT IGC+WV+KIKH +DGSIERYKARLVAKGY
Sbjct: 818  DCWIKAMEAELQALQSNNTWKLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGY 877

Query: 1501 TQIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            TQ+EG+D+   FSPVAK T +RLLLAM +  +W
Sbjct: 878  TQMEGLDYLYAFSPVAKLTIVRLLLAMVAFNQW 910



 Score =  194 bits (493), Expect(3) = e-133
 Identities = 92/160 (57%), Positives = 112/160 (70%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLL 271
           D WHFR+GH S   LQ +   +P +  +K  +C++CHYAK  KL F+ +   A H F LL
Sbjct: 401 DLWHFRMGHLSTERLQCMKPHYPILRNDKTFVCNTCHYAKHKKLPFSSSTSHASHIFYLL 460

Query: 272 HMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKI 451
           H+DIWGP   PSM GH YFLTIVDDHSRFTW+ LM  K ETRD I N I  ++TQ++ KI
Sbjct: 461 HVDIWGPCSKPSMHGHKYFLTIVDDHSRFTWVHLMHTKAETRDIIVNFIASVETQYNKKI 520

Query: 452 KSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           K IRSDNG EF M S+ AS GI+HQ +CVETP+QN I ER
Sbjct: 521 KKIRSDNGYEFLMPSFYASKGIMHQTTCVETPEQNGIAER 560



 Score =  112 bits (280), Expect(3) = e-133
 Identities = 54/95 (56%), Positives = 67/95 (70%)
 Frame = +3

Query: 549 NKIP*LKDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQ 728
           N I   K +HLLNVTR+LLF + LP  FW YA+ HAT+++N +PTP L   SP+E ++G 
Sbjct: 555 NGIAERKHQHLLNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLHNVSPYEKLHGH 614

Query: 729 PPTYTDLKVFGCLAYASTLTQNRNKLDPRARKCIF 833
            P  + L+VFGCL YASTL  NR KLDPRA  CIF
Sbjct: 615 LPEISHLRVFGCLCYASTLKANRKKLDPRAHPCIF 649


>KYP70921.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1352

 Score =  221 bits (562), Expect(3) = e-132
 Identities = 117/259 (45%), Positives = 159/259 (61%), Gaps = 3/259 (1%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLGF+P TKGY+ F+L+TR I +SRN +FYE+ FPY                  L + F 
Sbjct: 689  FLGFQPHTKGYLTFNLNTRSIEVSRNVVFYENHFPYFTQ-----DTQSASSTPSLPTPFT 743

Query: 1012 FDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVT-IVRKSKRVRKAPTYLKDFHCNSLSSL 1188
             +   +     P  SP   P   L S   P  + I  +  R R  P+YL+D+H    S+ 
Sbjct: 744  SNPMIHDYNFYPP-SPSSHPPHSLSSPESPTSSPIPSRPTRSRHPPSYLRDYHMTFTSTG 802

Query: 1189 KSAST--LYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSELQAL 1362
             S+S    YPL  V+SYN +S    HFI SI+   EP +Y +A +   WI+AM  E+ AL
Sbjct: 803  PSSSPGIRYPLDSVISYNRLSHPFRHFIMSISLLTEPKSYAEASKSDCWIKAMTDEITAL 862

Query: 1363 HQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDFFETFSP 1542
              N TW++T LPP KT IGCKW++K+KH++DGS+ER+KARLVAKGYTQ+EG+DF +TF+P
Sbjct: 863  EANNTWTVTSLPPHKTAIGCKWIYKVKHHADGSVERHKARLVAKGYTQLEGLDFLDTFAP 922

Query: 1543 VAKATTIRLLLAMASTQKW 1599
            VAK TT+ LLL++A+   W
Sbjct: 923  VAKLTTVHLLLSLAAIHNW 941



 Score =  188 bits (477), Expect(3) = e-132
 Identities = 83/160 (51%), Positives = 115/160 (71%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLL 271
           D WHFRLGH     L  +   +P +  NK+  C++CH+AKQ KL F  ++  A+  F LL
Sbjct: 441 DLWHFRLGHLPYDKLHSMKQYYPCLYSNKHFTCNTCHHAKQKKLSFPLSHSHALQSFALL 500

Query: 272 HMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKI 451
           H+DIWGP    S+ GH YFLTIVDDH+R+TW+FLM +K +T +C+ N I++I+ QF+ ++
Sbjct: 501 HIDIWGPCSKTSIHGHRYFLTIVDDHTRYTWVFLMASKADTCNCVTNFISHIENQFATRV 560

Query: 452 KSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           K IR+DNG EF+M++Y  S GIIHQ +C+ETP+QN IVER
Sbjct: 561 KVIRTDNGAEFSMNNYFDSKGIIHQTTCIETPEQNRIVER 600



 Score =  114 bits (285), Expect(3) = e-132
 Identities = 55/95 (57%), Positives = 69/95 (72%)
 Frame = +3

Query: 549 NKIP*LKDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQ 728
           N+I   K +HLLNVTR+LLF S LP  FW++A+ HAT+IIN +PTP L+  SPFE + G+
Sbjct: 595 NRIVERKHQHLLNVTRALLFQSNLPPTFWNFALMHATYIINCIPTPFLQHTSPFENLNGK 654

Query: 729 PPTYTDLKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           P   T L+VFGCL Y STL  +R KLDPRA  C+F
Sbjct: 655 PCDITTLRVFGCLCYVSTLKAHRTKLDPRASPCVF 689


>KYP36406.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1152

 Score =  234 bits (598), Expect(3) = e-131
 Identities = 129/274 (47%), Positives = 166/274 (60%), Gaps = 18/274 (6%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLGF+P TKGY++F+LH+R + +SRN +FYE  FPY  HT           H +L S   
Sbjct: 731  FLGFKPYTKGYLVFNLHSRQLVVSRNVIFYEDHFPYVHHT-----------HHELSS--- 776

Query: 1012 FDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIV---------------RKSKRVRKAP 1146
                + SL L    SP     P L     P +  +               R+S R R+ P
Sbjct: 777  ----EPSLLLSTSFSPIAPVDPILSRSNIPSIPHITTSSTNIPSFSSPHLRRSNRPRQPP 832

Query: 1147 TYLKDFHC--NSLSSLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQF 1320
            TYLK+FH    S+    S    YPL   LSY+ +SP    FI SI+ + +P TY +A + 
Sbjct: 833  TYLKNFHSVFTSIGPSSSKGVRYPLERSLSYSRLSPSFHKFILSISFSTKPKTYAEASKS 892

Query: 1321 PHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGY 1500
              W++AM+ E+ AL  N TW +TDLPP KT IGC+WV+KIKHN+DGSIERYKARLVAKGY
Sbjct: 893  DCWLKAMHDEITALEANDTWVLTDLPPNKTTIGCRWVYKIKHNADGSIERYKARLVAKGY 952

Query: 1501 TQIEGMDFFETF-SPVAKATTIRLLLAMASTQKW 1599
            TQ+EG+DF +TF SPVAK TT+RLLLA+A+  KW
Sbjct: 953  TQMEGLDFLDTFYSPVAKLTTVRLLLALAAIHKW 986



 Score =  184 bits (466), Expect(3) = e-131
 Identities = 87/159 (54%), Positives = 110/159 (69%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLL 271
           D WHF LGH S   +  +   +  ++ +K  IC++CH+AKQ KL F  ++  A   F+LL
Sbjct: 483 DLWHFHLGHLSHERMFIMKQYYSCLSVDKTFICNTCHHAKQHKLPFPLSHSHASQPFELL 542

Query: 272 HMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKI 451
           HMDIWGP  + SM GH YFLT+VDDH+RFTW+FLM +K ETR  I N IT I+ QFS  +
Sbjct: 543 HMDIWGPCTLTSMHGHRYFLTVVDDHTRFTWIFLMTSKSETRTHIINFITQIEKQFSKTV 602

Query: 452 KSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVE 568
           K IR+DNG +FNM  Y  S GIIHQ +C+ETPQQN IVE
Sbjct: 603 KIIRTDNGAKFNMHQYFLSKGIIHQTTCIETPQQNGIVE 641



 Score =  103 bits (257), Expect(3) = e-131
 Identities = 49/89 (55%), Positives = 61/89 (68%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+LNVTR+LLF S LP  FW +A+ H   +IN +PTP L  KSPFEI+Y  P   + 
Sbjct: 643 KHQHILNVTRALLFQSHLPSSFWFFALLHVVLLINCIPTPFLHNKSPFEIIYNHPFDISI 702

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+VFGCL Y  T+T +R KLDPRA   IF
Sbjct: 703 LRVFGCLCYTGTITAHRTKLDPRAHLSIF 731


>XP_017423424.1 PREDICTED: uncharacterized protein LOC108332614 [Vigna angularis]
          Length = 1100

 Score =  200 bits (508), Expect(3) = e-129
 Identities = 86/158 (54%), Positives = 117/158 (74%)
 Frame = +2

Query: 98  WHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLLHM 277
           WH+RL HP   V++H+   FPYV  + N++CD+CHYAKQ KL F  + ++   CF+++H 
Sbjct: 400 WHYRLDHPGDKVMKHICENFPYVKVDTNIVCDTCHYAKQRKLSFPKSVYVTTDCFEIVHC 459

Query: 278 DIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKIKS 457
           DIWGP+   S+ GH YFLTIVDD+SR TW+FLM NKG+TR+ ++N +  I+ QF+  IK+
Sbjct: 460 DIWGPLSTVSVHGHKYFLTIVDDYSRHTWVFLMNNKGQTRELLQNFVAKIKNQFNKLIKT 519

Query: 458 IRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           +RSDNGPEFN   +    GI +Q+SCVETP+QNSIVER
Sbjct: 520 VRSDNGPEFNCVDFYNLHGINNQKSCVETPEQNSIVER 557



 Score =  191 bits (485), Expect(3) = e-129
 Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 1/257 (0%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLG++ G KGY++ D++T+++FISRN +F+E  FPY        Q  + D   + D A  
Sbjct: 646  FLGYKCGVKGYIVLDINTKELFISRNVVFHEDIFPYK-----ELQGSRGDCDVEEDKA-- 698

Query: 1012 FDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFHCNSLSSLK 1191
                D    L  ++ P        G D H E+ I  +++              N  SS+K
Sbjct: 699  ----DTLNDLLKDHYPT-------GDDRHDELDIAEQTE-------------VNQSSSVK 734

Query: 1192 SA-STLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSELQALHQ 1368
            +   T YP+ D+L  +++   HL +   +T  +EP +YN+A     W+EAM  E++AL  
Sbjct: 735  NGFKTPYPISDLLCCDNLLDRHLKYTMIVTGNKEPRSYNEAKGMTEWVEAMQREIKALQD 794

Query: 1369 NGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDFFETFSPVA 1548
            N TW +T LPPGKT I CKWV+K K+ ++GSIERYKARLVAKGYTQ EG+D+ + FSPVA
Sbjct: 795  NDTWVLTPLPPGKTAIRCKWVYKTKYKANGSIERYKARLVAKGYTQQEGIDYLDIFSPVA 854

Query: 1549 KATTIRLLLAMASTQKW 1599
            K  T+RLL+A+A++  W
Sbjct: 855  KLITVRLLIALAASNSW 871



 Score =  123 bits (309), Expect(3) = e-129
 Identities = 57/95 (60%), Positives = 70/95 (73%)
 Frame = +3

Query: 549 NKIP*LKDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQ 728
           N I   K +H+LNVTR LLF + +P  +WSYAV HA ++INRLPT  L  K+P E++Y  
Sbjct: 552 NSIVERKHQHILNVTRGLLFQANIPNAYWSYAVGHAVYLINRLPTAILNHKTPHELLYNL 611

Query: 729 PPTYTDLKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           PPTY +LK FGCL +ASTL  NR+KLDPRARK IF
Sbjct: 612 PPTYLNLKTFGCLCFASTLENNRSKLDPRARKGIF 646


>KYP64985.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  227 bits (579), Expect(3) = e-127
 Identities = 124/271 (45%), Positives = 161/271 (59%), Gaps = 15/271 (5%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDI---HDDLDS 1002
            FLGF+PG KGY+LF+L T+   +SRN +FYES FPY  ++P     H           DS
Sbjct: 717  FLGFKPGVKGYLLFNLTTKSFLLSRNVIFYESHFPYASNSPSVSNNHTTGTTASQQSFDS 776

Query: 1003 AFIFDF----PDN---SLTLQPENSPPPDPAPCLGSDVHPEVTIV----RKSKRVRKAPT 1149
               FD     P+N    +     +    +P      D +  V IV    R S R RK P 
Sbjct: 777  LIAFDIISAIPNNVTSDIVSSNIDHNAVEPVLQFNDDSNDAVQIVDQPTRISTRPRKPPA 836

Query: 1150 YLKDFHCNSLSSLK-SASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPH 1326
            YL D+ C +LSS   S  T YPL   LSY++ S  H  F  S++   EP ++ +A +  H
Sbjct: 837  YLSDYDCPTLSSANTSCCTPYPLHSYLSYSNCSDSHTAFCMSLSATIEPTSFKEACKHDH 896

Query: 1327 WIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQ 1506
            W +AM +E+QAL +N TWS+  LPP K  +GCKWV+K K N+DGSIER+KARLVAKG+TQ
Sbjct: 897  WQQAMLAEIQALERNKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIERHKARLVAKGFTQ 956

Query: 1507 IEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
             EGMDFFETFSPV K TT+R LL++A +  W
Sbjct: 957  TEGMDFFETFSPVVKLTTVRFLLSVAVSHNW 987



 Score =  170 bits (430), Expect(3) = e-127
 Identities = 83/182 (45%), Positives = 115/182 (63%)
 Frame = +2

Query: 26  KHSVSLAAKCPDVNSLNKSDFFDTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHY 205
           +HSV   +    VN++N       WH RLGH S ++LQ +S+ +  + +     CD+CH+
Sbjct: 450 QHSVINKSNISVVNAVNTGAL---WHHRLGHTSNSILQLLSSQYNDIIYKNCTPCDTCHF 506

Query: 206 AKQTKLRFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNK 385
           AK  KL F      + H F+LLH DIWGP+   S+ GH YFLT+VDD SRFTW+ L+K+K
Sbjct: 507 AKHKKLPFPVCISKSSHLFELLHADIWGPLHTISIDGHKYFLTLVDDFSRFTWVHLLKSK 566

Query: 386 GETRDCIKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIV 565
            E +  +   I  I+ QF  K+K +RSDNG EF ++ + +S GI H+ SC+ETPQQN IV
Sbjct: 567 AEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEFFLTDFFSSKGIFHETSCIETPQQNGIV 626

Query: 566 ER 571
           ER
Sbjct: 627 ER 628



 Score =  110 bits (274), Expect(3) = e-127
 Identities = 51/89 (57%), Positives = 66/89 (74%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+LNV R+LLF S L   FWSYA+ HA  +INRLPTP L+ KSP+E ++G+ P  + 
Sbjct: 629 KHQHILNVARALLFQSGLSSVFWSYAIKHAVHLINRLPTPFLENKSPYESVFGKIPDLST 688

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+VFGCLA+A+T+T    KLD RA KCIF
Sbjct: 689 LRVFGCLAFANTITSGITKLDKRASKCIF 717


>KYP65734.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  231 bits (588), Expect(3) = e-126
 Identities = 124/272 (45%), Positives = 168/272 (61%), Gaps = 17/272 (6%)
 Frame = +1

Query: 835  LGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPD-----IHDDLD 999
            LG++ G KGY+L+DLH+ + F+SRN  F+E  FP+  HTP    + QP      I   + 
Sbjct: 337  LGYKEGVKGYLLYDLHSHEFFMSRNVFFHEFTFPF--HTPSQTSLTQPSPTPITIQTPIS 394

Query: 1000 SAFIFD-----FPDNSLTLQPENSPPP-DPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKD 1161
            S +  D      P +S ++ PE    P  PAP             R S R+R+ P+YLKD
Sbjct: 395  SPYDLDNHVPPSPTSSTSIPPEQPHQPLSPAPAPS----------RHSTRMRQPPSYLKD 444

Query: 1162 FHCNSLS------SLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFP 1323
            +HC+ L+      S    ST + +   L+Y+  SP +  F  S++T  EP+TY QA ++ 
Sbjct: 445  YHCSLLAPTGRINSFSGISTPHSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYD 504

Query: 1324 HWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYT 1503
             WI AM +EL AL  N TWSI DLP GK PIGCKWV+KIK+ SDGSIERYKARLVAKGY+
Sbjct: 505  CWIMAMKTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYS 564

Query: 1504 QIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            Q EG+D+ +T+SPVAK TT+R+LLA+ + + W
Sbjct: 565  QTEGLDYLDTYSPVAKLTTVRVLLALTAIKGW 596



 Score =  176 bits (446), Expect(3) = e-126
 Identities = 88/175 (50%), Positives = 116/175 (66%), Gaps = 3/175 (1%)
 Frame = +2

Query: 56  PDVNSLNKSDFFDT--WHFRLGHPSITVLQHVSNVFPYVTFNKNLI-CDSCHYAKQTKLR 226
           P V +    D  D+  WH RLGH S +  + +++ FP V++  + + CD CH+AKQ +L 
Sbjct: 73  PFVGNTISKDSSDSVLWHHRLGHLSNSTHRIIASQFPIVSYQHHDVPCDICHFAKQKRLP 132

Query: 227 FAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCI 406
              +N  +    +LLH DIWGP  IPS+ GH YFLT+VDD SRFTW+ +MK+K ETR  +
Sbjct: 133 HFISNTKSASVIELLHADIWGPYSIPSVFGHKYFLTLVDDFSRFTWIVMMKSKSETRQHL 192

Query: 407 KNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
            N I+YI+TQF  K+K +R+DNG EF M     S GIIHQ SCVETPQQN +VER
Sbjct: 193 TNFISYIETQFQTKLKCLRTDNGSEFLMHDLFLSKGIIHQGSCVETPQQNGVVER 247



 Score = 98.6 bits (244), Expect(3) = e-126
 Identities = 41/88 (46%), Positives = 62/88 (70%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+LN  R+L F + LP+ FW++A+ HA  +INR+P+P L  K+P++ ++ +PP    
Sbjct: 248 KHQHILNTARALYFQASLPKNFWNFAIQHAVHLINRIPSPLLDNKTPYQALHQRPPILVH 307

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCI 830
           L+ FGCLAYASTL  +R K  PRA+K +
Sbjct: 308 LRSFGCLAYASTLQAHRTKFQPRAKKSV 335


>KYP68426.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1423

 Score =  209 bits (533), Expect(3) = e-124
 Identities = 116/275 (42%), Positives = 164/275 (59%), Gaps = 19/275 (6%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPY-------TMHTPVHDQVHQP---- 978
            FLG+  GTKG++++DL TR+ FISR+  FYE+ FP        +   PV      P    
Sbjct: 741  FLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSC 800

Query: 979  -----DIHDDLDSAFIFDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKA 1143
                   HD+LD     +   NS TL   NS   D  P +  ++ PE+   R S+RV+  
Sbjct: 801  DPIPSHTHDNLDET---EHEHNSSTLPMTNSSNSDQ-PNIEINI-PEIR--RTSQRVKNR 853

Query: 1144 PTYLKDFHCNSLSSL---KSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAI 1314
            P YL+D+HC   +S     S++  YP+ D L Y   S     F+++I++  EP +Y  AI
Sbjct: 854  PGYLQDYHCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAI 913

Query: 1315 QFPHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAK 1494
                W EA+ +EL AL +  TW +TDLPP K  +GC+WVFK+K+++DGS+ERYKARLVAK
Sbjct: 914  NHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 973

Query: 1495 GYTQIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            G+TQI G+D+ +TFSPV + TTIR+ LA+A+   W
Sbjct: 974  GFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNW 1008



 Score =  177 bits (450), Expect(3) = e-124
 Identities = 83/161 (51%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNK-NLICDSCHYAKQTKLRFAHNNHIAMHCFDL 268
           D WH RLGH S   L  +   +P +  NK +L C+ CH AK  +L F  +   + + FDL
Sbjct: 492 DLWHLRLGHLSHDKLSALKGSYPEIQCNKISLPCEICHLAKHKRLPFPDSLTKSENVFDL 551

Query: 269 LHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAK 448
           +H+DIWGP+ + S+ GH YFLTIVDD SRFTW+F MKNK ET+  ++N ++++QTQF   
Sbjct: 552 IHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQN 611

Query: 449 IKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           IK+IR+DNG EF +  + A LGI+HQ SCV TPQQN +VER
Sbjct: 612 IKTIRTDNGSEFLLKDWYAKLGIVHQTSCVNTPQQNGVVER 652



 Score =  110 bits (275), Expect(3) = e-124
 Identities = 46/89 (51%), Positives = 69/89 (77%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+L++ R+L+F S + + FW+YA+ HA  +INRLPT  L+  SP+ ++Y + P ++ 
Sbjct: 653 KHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSH 712

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           LKVFGCLA+ASTL+ NR KL+PR+RKC+F
Sbjct: 713 LKVFGCLAFASTLSHNRTKLEPRSRKCMF 741


>KYP43110.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  209 bits (533), Expect(3) = e-124
 Identities = 116/275 (42%), Positives = 164/275 (59%), Gaps = 19/275 (6%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPY-------TMHTPVHDQVHQP---- 978
            FLG+  GTKG++++DL TR+ FISR+  FYE+ FP        +   PV      P    
Sbjct: 671  FLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSC 730

Query: 979  -----DIHDDLDSAFIFDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKA 1143
                   HD+LD     +   NS TL   NS   D  P +  ++ PE+   R S+RV+  
Sbjct: 731  DPIPSHTHDNLDET---EHEHNSSTLPMTNSSNSDQ-PNIEINI-PEIR--RTSQRVKNR 783

Query: 1144 PTYLKDFHCNSLSSL---KSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAI 1314
            P YL+D+HC   +S     S++  YP+ D L Y   S     F+++I++  EP +Y  AI
Sbjct: 784  PGYLQDYHCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAI 843

Query: 1315 QFPHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAK 1494
                W EA+ +EL AL +  TW +TDLPP K  +GC+WVFK+K+++DGS+ERYKARLVAK
Sbjct: 844  NHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAK 903

Query: 1495 GYTQIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            G+TQI G+D+ +TFSPV + TTIR+ LA+A+   W
Sbjct: 904  GFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNW 938



 Score =  177 bits (450), Expect(3) = e-124
 Identities = 83/161 (51%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNK-NLICDSCHYAKQTKLRFAHNNHIAMHCFDL 268
           D WH RLGH S   L  +   +P +  NK +L C+ CH AK  +L F  +   + + FDL
Sbjct: 422 DLWHLRLGHLSHDKLSALKGSYPEIQCNKISLPCEICHLAKHKRLPFPDSLTKSENVFDL 481

Query: 269 LHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAK 448
           +H+DIWGP+ + S+ GH YFLTIVDD SRFTW+F MKNK ET+  ++N ++++QTQF   
Sbjct: 482 IHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQN 541

Query: 449 IKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           IK+IR+DNG EF +  + A LGI+HQ SCV TPQQN +VER
Sbjct: 542 IKTIRTDNGSEFLLKDWYAKLGIVHQTSCVNTPQQNGVVER 582



 Score =  110 bits (275), Expect(3) = e-124
 Identities = 46/89 (51%), Positives = 69/89 (77%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H+L++ R+L+F S + + FW+YA+ HA  +INRLPT  L+  SP+ ++Y + P ++ 
Sbjct: 583 KHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSH 642

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           LKVFGCLA+ASTL+ NR KL+PR+RKC+F
Sbjct: 643 LKVFGCLAFASTLSHNRTKLEPRSRKCMF 671


>KYP37906.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1097

 Score =  214 bits (544), Expect(3) = e-123
 Identities = 114/265 (43%), Positives = 164/265 (61%), Gaps = 9/265 (3%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTP------VHDQVHQPDIHDD 993
            FLGF+P  KG +L+DL++R+ F+SR+  ++E  FP+   +P      +    HQP +  D
Sbjct: 495  FLGFKPQVKGSILYDLNSRETFLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPID 554

Query: 994  LDSAFIFDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFHCN 1173
             D   +    + + T  P +  PP P              V+KS R RK P+YL D+H  
Sbjct: 555  TDPTPLST--NTTPTSSPVSVVPPPP-------------FVQKSTRPRKLPSYLHDYHHT 599

Query: 1174 SLSSLKSASTLYPLFDV---LSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMN 1344
             L++  S +   PL+ +   +SY+++SP    F  SI++ +EPN+Y +AIQ   W  A+ 
Sbjct: 600  LLTTHNSPTISQPLYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQ 659

Query: 1345 SELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDF 1524
            +EL AL +N TW +T LPP K  +GCKWVFK+K NSDG+IER+KARLVAKGYTQ EG+D+
Sbjct: 660  TELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTEGLDY 719

Query: 1525 FETFSPVAKATTIRLLLAMASTQKW 1599
             +TFSPV K TT+R LLA+A+ + W
Sbjct: 720  LDTFSPVVKMTTVRTLLAVATAKNW 744



 Score =  172 bits (435), Expect(3) = e-123
 Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
 Frame = +2

Query: 53  CPDVNSLNKSDFFDT--WHFRLGHPSITVLQHVSNVFPYVTFNKNLI-CDSCHYAKQTKL 223
           C  ++S+N    +D   WH RLGH +   LQ + + FP++   KN   C+ C+ AKQ +L
Sbjct: 231 CLYLHSINNFHSYDNDLWHIRLGHLAHEKLQAMKSNFPFIDCKKNKDPCNVCYLAKQRQL 290

Query: 224 RFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDC 403
            F+H+   A   FDLLH+DIWGP    S+ GH +FLTIVDD SR TW++ MK+K E  D 
Sbjct: 291 PFSHSVTKADEIFDLLHVDIWGPTTPASIFGHRFFLTIVDDKSRHTWVYFMKHKSEVADH 350

Query: 404 IKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           + + IT I+ QF  K+K +RSDNGPEF + ++    GI+HQ SCVETPQQN IVER
Sbjct: 351 LSSFITLIENQFGKKVKCVRSDNGPEFLLKNFYHEKGILHQTSCVETPQQNGIVER 406



 Score =  108 bits (269), Expect(3) = e-123
 Identities = 48/89 (53%), Positives = 63/89 (70%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H++ V R+L+  S LP+ FW YAVSHA F+INR P+  L+ K P+EI+Y   P    
Sbjct: 407 KHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEIIYNALPDLAG 466

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           +KVFGCLAYA+TL  NR K DPR R+C+F
Sbjct: 467 IKVFGCLAYATTLHHNRKKFDPRGRRCVF 495


>GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score =  229 bits (584), Expect(3) = e-122
 Identities = 126/278 (45%), Positives = 168/278 (60%), Gaps = 22/278 (7%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHT----------PVHDQV---- 969
            FLGF+ GTKG+V  DLH+ +I +SRN  F E  FPY   T          P  D +    
Sbjct: 747  FLGFKSGTKGFVALDLHSYEIVVSRNVQFEELIFPYPSQTQSQTKWEFFIPPIDPIPLTN 806

Query: 970  ------HQPDIHDDLDSAFIFDFPDNSLTLQPENSPP--PDPAPCLGSDVHPEVTIVRKS 1125
                   QP   +D  +  I   P +S++     +PP  PD +P       P    +RKS
Sbjct: 807  DTEPTTDQPTTSNDTSTISIE--PVDSISSNESITPPAPPDASPQYSPTTEPPP--LRKS 862

Query: 1126 KRVRKAPTYLKDFHCNSLSSLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYN 1305
             R+ K P +L D+ CN++      ST YP+    S+NH+S   L +  S+ T  EP++Y+
Sbjct: 863  TRITKLPPHLLDYECNNIVH----STKYPISKYTSHNHLSSKQLSYTLSLLTETEPSSYS 918

Query: 1306 QAIQFPHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARL 1485
            +A +  HW++AMN+ELQAL QN TWSI  LP G  PIG KWV+K+K  +DGSIERYKARL
Sbjct: 919  EACKHDHWVKAMNAELQALEQNKTWSIVSLPVGAKPIGSKWVYKVKRKADGSIERYKARL 978

Query: 1486 VAKGYTQIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            VAKGY Q+EG+D+FETFSPVAK TTIR++LA+AS + W
Sbjct: 979  VAKGYNQVEGIDYFETFSPVAKMTTIRVILAIASIKNW 1016



 Score =  179 bits (455), Expect(3) = e-122
 Identities = 80/158 (50%), Positives = 109/158 (68%)
 Frame = +2

Query: 98  WHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLLHM 277
           WHFR GH S + L+ +   +P ++ NK+ +CD CH AKQ KL ++ +   +  CF+LLHM
Sbjct: 501 WHFRFGHASNSRLEIMHKSYPSISINKDCVCDVCHLAKQKKLSYSLSTSKSTKCFELLHM 560

Query: 278 DIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKIKS 457
           DIWGP    ++ GH YFLTIVDD SRFTW+ L+K K E    +++ I  ++ QF + +K 
Sbjct: 561 DIWGPYSTATLHGHKYFLTIVDDFSRFTWVILLKGKNEVASHVQHFIHLVENQFESTVKI 620

Query: 458 IRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           +RSDNGPEF++SS+ AS  I+HQ SCV TPQQN  VER
Sbjct: 621 VRSDNGPEFSLSSFYASKRIVHQTSCVYTPQQNGRVER 658



 Score = 82.8 bits (203), Expect(3) = e-122
 Identities = 38/89 (42%), Positives = 58/89 (65%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K + +L + R+LL  S LP  +W YAV H+ +++NR+P+ A++   P+  ++ + P  + 
Sbjct: 659 KHQCILAIARALLIQSHLPAKYWGYAVLHSVYLMNRMPSVAIEGGLPYHKLHNRLPDISM 718

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           LK+FGCL Y ST   +R KLD RARKC F
Sbjct: 719 LKIFGCLCYVSTTDVHRLKLDHRARKCAF 747


>KYP34298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  212 bits (540), Expect(3) = e-122
 Identities = 114/265 (43%), Positives = 163/265 (61%), Gaps = 9/265 (3%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTP------VHDQVHQPDIHDD 993
            FLGF+P  KG +L+DL++R+ F+SR+  ++E  FP+   +P      +    HQP +  D
Sbjct: 339  FLGFKPQVKGSILYDLNSRETFLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPID 398

Query: 994  LDSAFIFDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIVRKSKRVRKAPTYLKDFHCN 1173
             D   +    + + T  P +  PP P              VRKS R RK P+YL D+H  
Sbjct: 399  TDPTPLST--NTTPTSSPVSVVPPPP-------------FVRKSTRPRKLPSYLHDYHHT 443

Query: 1174 SLSSLKSASTLYPLFDV---LSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMN 1344
             L++  S +   PL+ +   +SY+++SP    F  SI++ +EPN+Y +AIQ   W  A+ 
Sbjct: 444  LLTTHNSPTISQPLYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQ 503

Query: 1345 SELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVAKGYTQIEGMDF 1524
            +EL AL +N TW +T LPP K  +GCKWVFK+K NSDG+IER+KARLVAKGYTQ E +D+
Sbjct: 504  TELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDY 563

Query: 1525 FETFSPVAKATTIRLLLAMASTQKW 1599
             +TFSPV K TT+R LLA+A+ + W
Sbjct: 564  LDTFSPVVKMTTVRTLLAVATAKNW 588



 Score =  171 bits (433), Expect(3) = e-122
 Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
 Frame = +2

Query: 53  CPDVNSLNKSDFFDT--WHFRLGHPSITVLQHVSNVFPYVTFNKNLI-CDSCHYAKQTKL 223
           C  ++S+N    +D   WH RLGH +   LQ + + FP++   KN   C+ C+ AKQ +L
Sbjct: 75  CLYLHSVNNFHSYDNDLWHIRLGHLAHEKLQAMKSNFPFIDCKKNKDPCNVCYLAKQRQL 134

Query: 224 RFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDC 403
            F+H+   A   FDLLH+DIWGP    S+ GH +FLTIVDD SR TW++ MK+K E  D 
Sbjct: 135 PFSHSVTKADEIFDLLHVDIWGPTTPASIFGHKFFLTIVDDKSRHTWVYFMKHKSEVADH 194

Query: 404 IKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           + + IT I+ QF  K+K +RSDNGPEF + ++    GI+HQ SCVETPQQN IVER
Sbjct: 195 LSSFITLIENQFGKKVKCVRSDNGPEFLLKNFYHEKGILHQTSCVETPQQNGIVER 250



 Score =  108 bits (269), Expect(3) = e-122
 Identities = 48/89 (53%), Positives = 63/89 (70%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +H++ V R+L+  S LP+ FW YAVSHA F+INR P+  L+ K P+EI+Y   P    
Sbjct: 251 KHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEIIYNALPDLAG 310

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           +KVFGCLAYA+TL  NR K DPR R+C+F
Sbjct: 311 IKVFGCLAYATTLHHNRKKFDPRGRRCVF 339


>KYP70315.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 703

 Score =  192 bits (487), Expect(3) = e-121
 Identities = 85/160 (53%), Positives = 110/160 (68%)
 Frame = +2

Query: 92  DTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAKQTKLRFAHNNHIAMHCFDLL 271
           D WHFR+GH     L  +   +P +  NK+  C++CHYAKQ KL F  ++      FDLL
Sbjct: 230 DLWHFRMGHLPYEKLHSMKQYYPCLYSNKHFTCNTCHYAKQKKLPFPLSHSHTSKSFDLL 289

Query: 272 HMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGETRDCIKNSITYIQTQFSAKI 451
           H+DIWGP    S+ GH YFLTIVDDH+RFTW+FLM  K E R+C+ N I Y++ QF  ++
Sbjct: 290 HIDIWGPCSKISLHGHRYFLTIVDDHTRFTWVFLMTTKAEVRNCVTNFIAYVENQFETQV 349

Query: 452 KSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
           K IR+DNG EF+M+ Y  S GIIHQ +C+ETP+QN IVER
Sbjct: 350 KVIRTDNGVEFSMNKYFESKGIIHQTTCIETPEQNGIVER 389



 Score =  185 bits (470), Expect(3) = e-121
 Identities = 103/224 (45%), Positives = 131/224 (58%), Gaps = 7/224 (3%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTP----VHDQVHQPDIHDDLD 999
            FLGF+P TKGY+ F+LHTR+I +SRN +FYE  FPY  HT         +  P  +D + 
Sbjct: 478  FLGFKPHTKGYLTFNLHTRNIEVSRNVIFYEDHFPYVDHTAQPTSFTPSLPLPFTNDHII 537

Query: 1000 SAFIFDFPDNSLTLQPENSPPPDPAPCLGSDVHPEVTIV-RKSKRVRKAPTYLKDFHCN- 1173
            S F      N   L P  S    P+P + S      T   R+S R    P+YL+DFH   
Sbjct: 538  SDF------NLHNLAPSTS---QPSPSISSPESAHSTPAPRRSTRSHHPPSYLRDFHVTL 588

Query: 1174 -SLSSLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQAIQFPHWIEAMNSE 1350
             S  S  S    YPL   +SY H+S    HFI SI+T  EPN++ +A +   WI+AM  E
Sbjct: 589  TSTGSPSSPGIRYPLESFISYAHLSSSFRHFILSISTTTEPNSFAEASKHDCWIKAMKDE 648

Query: 1351 LQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKAR 1482
            + AL  N TW+IT LPP KT IGCKW++KIKHN+DGS+ERYKAR
Sbjct: 649  ITALEANHTWTITSLPPNKTAIGCKWIYKIKHNADGSVERYKAR 692



 Score =  111 bits (278), Expect(3) = e-121
 Identities = 53/89 (59%), Positives = 65/89 (73%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +HLLNVTR+LLF S LP  FW +A+ HAT+IIN L TP L+  SPFE +YG+P   T 
Sbjct: 390 KHQHLLNVTRALLFQSALPPSFWCFALMHATYIINCLTTPFLQHISPFEKLYGKPCDITT 449

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
           L+VFGCL Y ST+  +R KLDPRA  C+F
Sbjct: 450 LRVFGCLCYVSTIKAHRKKLDPRAHPCVF 478


>CAN65820.1 hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  228 bits (582), Expect(3) = e-121
 Identities = 118/276 (42%), Positives = 171/276 (61%), Gaps = 20/276 (7%)
 Frame = +1

Query: 832  FLGFRPGTKGYVLFDLHTRDIFISRNALFYESEFPYTMHTPVHDQVHQPDIHDDLDSAFI 1011
            FLG+ P  KGY + DL T   F+SRN +F+ES FP      + D +H+P +  D    + 
Sbjct: 755  FLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTFP-----SIPDTIHKPFVFXDFPQIYE 809

Query: 1012 FDF--PDNSLTLQPENSPPPDPAPCLGSDVHPEVTI--------VRKSKRVRKAPTYLKD 1161
                 P+NS+++   ++   DP   + S + PE TI        +R+S+R +  P YL++
Sbjct: 810  SKSCKPNNSVSITSGSTNSTDPTSXIESSI-PENTIHANNDANSLRRSERTKHLPKYLQN 868

Query: 1162 FHCNSL----------SSLKSASTLYPLFDVLSYNHISPHHLHFINSITTAEEPNTYNQA 1311
            ++C ++          SS  S+   Y +F  LS + +S  H  FI+ I++  EP TY QA
Sbjct: 869  YYCGNMTKIDLATQAPSSCSSSGKPYYIFSFLSDSKLSSKHKAFISIISSTFEPKTYKQA 928

Query: 1312 IQFPHWIEAMNSELQALHQNGTWSITDLPPGKTPIGCKWVFKIKHNSDGSIERYKARLVA 1491
            +  PHW  AM  E++AL  N TW +  LPP KT IGCKWV+++K  +DGS+ERYKARLVA
Sbjct: 929  VSIPHWKTAMTDEIKALEHNKTWDLAILPPNKTTIGCKWVYQVKFKADGSVERYKARLVA 988

Query: 1492 KGYTQIEGMDFFETFSPVAKATTIRLLLAMASTQKW 1599
            KGYTQ EG+DFF+T+SPVAK TT+R+LLA+A+T++W
Sbjct: 989  KGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAATKQW 1024



 Score =  156 bits (395), Expect(3) = e-121
 Identities = 83/180 (46%), Positives = 104/180 (57%)
 Frame = +2

Query: 32   SVSLAAKCPDVNSLNKSDFFDTWHFRLGHPSITVLQHVSNVFPYVTFNKNLICDSCHYAK 211
            S SL   C  VNS       D WHFRLGH     +Q +++         N +C  C  AK
Sbjct: 495  SSSLVESCT-VNS-------DLWHFRLGHIPNAKIQLINSSDSSXKXIHNKVCXICPLAK 546

Query: 212  QTKLRFAHNNHIAMHCFDLLHMDIWGPIGIPSMQGHHYFLTIVDDHSRFTWLFLMKNKGE 391
            Q KL F  +N  +   F L+H +IWGP  IPS   + +FLT VDD +RFTWLFLMK K E
Sbjct: 547  QKKLPFPISNSQSNKAFQLVHXBIWGPFSIPSYSXYXFFLTXVDDFTRFTWLFLMKTKTE 606

Query: 392  TRDCIKNSITYIQTQFSAKIKSIRSDNGPEFNMSSYLASLGIIHQRSCVETPQQNSIVER 571
            T   + N + Y+ T F+  I+++ SDNG EFNM ++    GIIHQ SCVETP QN  VER
Sbjct: 607  TXAILTNFLAYVHTHFNTNIQTLXSDNGQEFNMPTFYQEHGIIHQLSCVETPXQNGRVER 666



 Score =  101 bits (251), Expect(3) = e-121
 Identities = 45/89 (50%), Positives = 61/89 (68%)
 Frame = +3

Query: 567 KDRHLLNVTRSLLFHSKLPRCFWSYAVSHATFIINRLPTPALK*KSPFEIMYGQPPTYTD 746
           K +HLLNV RSL+F SKLP  +W+  V   T +INR P+  L  ++P+++++ +PP Y  
Sbjct: 667 KHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNY 726

Query: 747 LKVFGCLAYASTLTQNRNKLDPRARKCIF 833
            K FGCL +AST+T NR K  PRA KCIF
Sbjct: 727 FKXFGCLCFASTITNNRGKFQPRATKCIF 755