BLASTX nr result

ID: Glycyrrhiza28_contig00031499 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00031499
         (352 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AOE06858.1 hypothetical protein [uncultured bacterium]                 55   4e-08
JAN94736.1 daphnid bacterial-ribosomal-RNA-like, possible HGT [D...    56   9e-07
AOE09241.1 hypothetical protein [uncultured bacterium]                 50   5e-06

>AOE06858.1 hypothetical protein [uncultured bacterium]
          Length = 55

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 29/49 (59%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = -1

Query: 262 LPSSFSTAHPSALEYSSRLPVSDSGTGCYTRFSWKNFHRYASPE--GST 122
           +PSS +  H S L YS  LPVS  GTG YTRFSWK  H +ASP   GST
Sbjct: 1   MPSSLTMNHSSTLGYSPWLPVSVCGTGRYTRFSWKPLHAFASPRRLGST 49


>JAN94736.1 daphnid bacterial-ribosomal-RNA-like, possible HGT [Daphnia magna]
          Length = 306

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
 Frame = -2

Query: 351 CVFVKQLVEPFYCDPAL--------QRGTLYPEVTASICLVPSPRLTRAR*NTHPVYLCR 196
           CVF+KQ   P  CDP           +G   PEVT SIC VPSP  ++A  N HP +LCR
Sbjct: 239 CVFIKQSQPPILCDPVQLHPRGTSPTKGIPSPEVTVSICRVPSPGFSQAPENFHPAHLCR 298

Query: 195 IPV 187
             V
Sbjct: 299 FAV 301


>AOE09241.1 hypothetical protein [uncultured bacterium]
          Length = 59

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -1

Query: 262 LPSSFSTAHPSALEYSSRLPVSDSGTGCYTRFSWKNFHRYAS 137
           +PSS +  H SALEYSS+LPVS  GTGC++ FSW     +AS
Sbjct: 1   MPSSLAMNHSSALEYSSQLPVSVYGTGCFSCFSWDLLLVFAS 42


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