BLASTX nr result
ID: Glycyrrhiza28_contig00031431
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00031431
(284 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum] 82 2e-16
GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum] 71 3e-12
GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterran... 66 3e-11
GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum] 63 3e-10
GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium ... 63 8e-10
XP_018435759.1 PREDICTED: uncharacterized protein LOC108808055 [... 57 2e-07
XP_019089219.1 PREDICTED: uncharacterized protein LOC104733943 [... 55 3e-07
OMO53937.1 reverse transcriptase [Corchorus capsularis] 57 3e-07
XP_013658112.1 PREDICTED: uncharacterized protein LOC106362816 [... 55 1e-06
EEF45615.1 hypothetical protein RCOM_1724280 [Ricinus communis] 52 2e-06
AAD22368.1 putative non-LTR retroelement reverse transcriptase [... 54 2e-06
AAG28895.1 F12A21.24 [Arabidopsis thaliana] 54 3e-06
ABE65462.1 hypothetical protein At2g27870 [Arabidopsis thaliana] 53 4e-06
BAB09815.1 non-LTR retroelement reverse transcriptase-like [Arab... 53 4e-06
AAD21515.1 putative reverse transcriptase [Arabidopsis thaliana]... 53 5e-06
ABK28199.1 unknown, partial [Arabidopsis thaliana] 53 5e-06
XP_018474025.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 52 9e-06
XP_013668797.1 PREDICTED: uncharacterized protein LOC106373127 [... 52 9e-06
XP_014630698.1 PREDICTED: uncharacterized protein LOC106798600 [... 51 9e-06
>GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum]
Length = 533
Score = 82.4 bits (202), Expect = 2e-16
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +2
Query: 44 LVRSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAAD 223
L+ V+FEMDSKV+VN V NA+L PL+ E+ +L P W T + HVYREANR AD
Sbjct: 433 LLPKVVFEMDSKVIVNMVTSGHTNNAYLSPLLGEVVSLLQHPNWETSIAHVYREANRCAD 492
Query: 224 WLASLGHSSPFHCNMLSV 277
+L + GHSS F +++++
Sbjct: 493 FLTNKGHSSSFEGDIVNL 510
>GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]
Length = 482
Score = 70.9 bits (172), Expect = 3e-12
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 44 LVRSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAAD 223
L+ V+FEMDSKV+VN V NA+L PL+ EI +L P W T + HVYREAN+ AD
Sbjct: 412 LLPKVVFEMDSKVIVNMVTSGHTNNAYLSPLLGEIVSLLQHPNWETSIAHVYREANQCAD 471
Query: 224 WLAS 235
+L +
Sbjct: 472 FLTN 475
>GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterraneum]
Length = 193
Score = 65.9 bits (159), Expect = 3e-11
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +2
Query: 56 VIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLAS 235
VI E DS VVN ++ R +LQPL+ E+ ++H PGW V+H++REAN D LA
Sbjct: 97 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPGWTIHVNHIHREANSCFDALAF 156
Query: 236 LGHSSPFHCNMLSVVP 283
GH F ML +P
Sbjct: 157 KGHDVGFTHVMLDSIP 172
>GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum]
Length = 193
Score = 63.2 bits (152), Expect = 3e-10
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +2
Query: 56 VIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLAS 235
VI E DS VVN ++ R +LQPL+ E+ ++H P W V+H++REAN D LA
Sbjct: 97 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTIHVNHIHREANSCVDALAF 156
Query: 236 LGHSSPFHCNMLSVVP 283
GH F +L +P
Sbjct: 157 KGHDVGFTHVLLDSIP 172
>GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium subterraneum]
Length = 238
Score = 62.8 bits (151), Expect = 8e-10
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +2
Query: 56 VIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLAS 235
VI E DS VVN ++ R +LQPL+ E+ ++H P W V+H++REAN A+ LA
Sbjct: 142 VILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTIHVNHIHREANSCANALAF 201
Query: 236 LGHSSPFHCNMLSVVP 283
GH F +L +P
Sbjct: 202 KGHDVGFTHVLLDSIP 217
>XP_018435759.1 PREDICTED: uncharacterized protein LOC108808055 [Raphanus sativus]
Length = 1802
Score = 57.0 bits (136), Expect = 2e-07
Identities = 31/73 (42%), Positives = 40/73 (54%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DSK+VV F+ + G+ + +CH W R HVYREANR AD LA+L
Sbjct: 1709 EVDSKMVVEFLTTGI-GDTHPPSFLVRLCHGFSTRDWLVRFVHVYREANRLADGLANLAF 1767
Query: 245 SSPFHCNMLSVVP 283
S PF + L V P
Sbjct: 1768 SLPFGFHKLDVAP 1780
>XP_019089219.1 PREDICTED: uncharacterized protein LOC104733943 [Camelina sativa]
Length = 147
Score = 54.7 bits (130), Expect = 3e-07
Identities = 32/72 (44%), Positives = 39/72 (54%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DSKVVV F+ V+ L LI +CH WC R+ HVYRE NR AD LA+
Sbjct: 54 EIDSKVVVGFLKTGVSEAHLLSFLIC-LCHGFISRDWCVRISHVYRETNRLADGLANYAF 112
Query: 245 SSPFHCNMLSVV 280
S + L VV
Sbjct: 113 SLELVFHALDVV 124
>OMO53937.1 reverse transcriptase [Corchorus capsularis]
Length = 1562
Score = 56.6 bits (135), Expect = 3e-07
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 47 VRSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADW 226
+ S++ EMD+ VVV F+ ++ + L+ + C+ + GW T++ H+YRE NR AD
Sbjct: 1489 IASLVIEMDAAVVVQFLKDQLDSSHPCYTLVRD-CYEIIQGGWITKIRHIYREGNRCADL 1547
Query: 227 LASLGHSSP 253
LA+L H +P
Sbjct: 1548 LATLAHDNP 1556
>XP_013658112.1 PREDICTED: uncharacterized protein LOC106362816 [Brassica napus]
Length = 1707
Score = 55.1 bits (131), Expect = 1e-06
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DS VVV F+ R+ L L+ +CH W R+DHVYREANR AD LA+
Sbjct: 1613 EVDSAVVVGFLKTRIEETHPLSFLV-RLCHGYLSKDWIVRIDHVYREANRLADGLANYAF 1671
Query: 245 SSPFHCNMLSVVP 283
+ P + VP
Sbjct: 1672 TLPLGIHSFDYVP 1684
>EEF45615.1 hypothetical protein RCOM_1724280 [Ricinus communis]
Length = 140
Score = 52.4 bits (124), Expect = 2e-06
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = +2
Query: 50 RSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWL 229
+ V+ E+D+++VV+ + +VA + L SEI ML W R++H +REANR AD L
Sbjct: 36 KQVLMEVDNQLVVDVLSEKVAPSRQYLSLHSEIVKML-GWNWIVRINHSFREANRCADCL 94
Query: 230 ASLGHSSPFHCNMLSVVP 283
A+ GHS ++L P
Sbjct: 95 ANTGHSFALGYHVLQAPP 112
>AAD22368.1 putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 53.9 bits (128), Expect = 2e-06
Identities = 31/78 (39%), Positives = 43/78 (55%)
Frame = +2
Query: 50 RSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWL 229
R V E+DSK+VV F+ +A + L L+ +C+ GW R+ HVYREANR AD L
Sbjct: 223 RRVELEVDSKMVVGFLTTGIADSHPLSFLL-RLCYDFLSKGWIVRISHVYREANRLADGL 281
Query: 230 ASLGHSSPFHCNMLSVVP 283
A+ S ++L P
Sbjct: 282 ANYAFSLSLGLHLLESRP 299
>AAG28895.1 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 53.5 bits (127), Expect = 3e-06
Identities = 33/86 (38%), Positives = 44/86 (51%)
Frame = +2
Query: 26 WRRILELVRSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYRE 205
W + L V E+DS++VV F+ + L L+ +CH L W R+ HVYRE
Sbjct: 700 WTKALTRVE---LEVDSELVVGFLKTGIGDQHPLSFLV-RLCHGLLSKDWIVRITHVYRE 755
Query: 206 ANRAADWLASLGHSSPFHCNMLSVVP 283
ANR AD LA+ S P + L VP
Sbjct: 756 ANRLADGLANYAFSLPLGFHSLIDVP 781
>ABE65462.1 hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 53.1 bits (126), Expect = 4e-06
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DS++VV F+ + L L+ +CH W R+ HVYREANR AD LA+
Sbjct: 221 EVDSEIVVGFLKIXINEVHPLSFLV-RLCHDFISRDWRVRISHVYREANRLADGLANYAF 279
Query: 245 SSPFHCNMLSVVP 283
S P + LS+VP
Sbjct: 280 SLPLGFHSLSLVP 292
>BAB09815.1 non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 53.1 bits (126), Expect = 4e-06
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +2
Query: 50 RSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWL 229
R V E+DS +VV F+ + G++ + +CH W R+ HVYREANR AD L
Sbjct: 578 RRVRLEVDSALVVGFLQSGI-GDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGL 636
Query: 230 ASLGHSSPFHCNMLSVVP 283
A+ + PF +L P
Sbjct: 637 ANYAFTLPFGFLLLDSCP 654
>AAD21515.1 putative reverse transcriptase [Arabidopsis thaliana] AAM15081.1
putative reverse transcriptase [Arabidopsis thaliana]
Length = 314
Score = 52.8 bits (125), Expect = 5e-06
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DS++VV F+ + L L+ +CH W R+ HVYREANR AD LA+
Sbjct: 221 EVDSEIVVGFLKIGINEVHPLSFLV-RLCHDFISRDWRVRISHVYREANRLADGLANYAF 279
Query: 245 SSPFHCNMLSVVP 283
S P + LS+VP
Sbjct: 280 SLPLGFHSLSLVP 292
>ABK28199.1 unknown, partial [Arabidopsis thaliana]
Length = 315
Score = 52.8 bits (125), Expect = 5e-06
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DS++VV F+ + L L+ +CH W R+ HVYREANR AD LA+
Sbjct: 221 EVDSEIVVGFLKIGINEVHPLSFLV-RLCHDFISRDWRVRISHVYREANRLADGLANYAF 279
Query: 245 SSPFHCNMLSVVP 283
S P + LS+VP
Sbjct: 280 SLPLGFHSLSLVP 292
>XP_018474025.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108845292
[Raphanus sativus]
Length = 1593
Score = 52.4 bits (124), Expect = 9e-06
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +2
Query: 50 RSVIFEMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWL 229
R + E+DSK+VV F+ + G+A + +CH W + HVY+EANR AD L
Sbjct: 1495 RRLELEVDSKMVVEFLTTGI-GDAHSLSFLVRLCHGFLIRDWLVHIVHVYKEANRLADGL 1553
Query: 230 ASLGHSSPFHCNMLSVVP 283
A+L S P + V P
Sbjct: 1554 ANLAFSLPLGFHSFDVAP 1571
>XP_013668797.1 PREDICTED: uncharacterized protein LOC106373127 [Brassica napus]
Length = 1818
Score = 52.4 bits (124), Expect = 9e-06
Identities = 29/73 (39%), Positives = 38/73 (52%)
Frame = +2
Query: 65 EMDSKVVVNFVDCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGH 244
E+DS VVV F+ + L L+ +CH W R+DHVYREANR AD LA+
Sbjct: 1724 EVDSAVVVGFLKTGIEETHPLSFLV-RLCHGYLSKDWIVRIDHVYREANRLADGLANYAF 1782
Query: 245 SSPFHCNMLSVVP 283
+ P + VP
Sbjct: 1783 TLPLGIHSFDYVP 1795
>XP_014630698.1 PREDICTED: uncharacterized protein LOC106798600 [Glycine max]
Length = 156
Score = 50.8 bits (120), Expect = 9e-06
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 122 FLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGHS---SPFHCN 265
+L+ LI +I HD GW T + H+YREANR+AD+LAS+G + SP C+
Sbjct: 96 YLRWLICDIKATFHDHGWKTTISHIYREANRSADFLASIGLNDSYSPGFCS 146