BLASTX nr result

ID: Glycyrrhiza28_contig00030432 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00030432
         (272 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004511172.1 PREDICTED: ATP-dependent RNA helicase DHX36 [Cice...    77   2e-14
XP_014524279.1 PREDICTED: ATP-dependent RNA helicase DHX36 [Vign...    70   3e-12
XP_017433132.1 PREDICTED: DExH-box ATP-dependent RNA helicase DE...    68   2e-11
XP_007133512.1 hypothetical protein PHAVU_011G1853001g, partial ...    66   9e-11
KYP51609.1 putative ATP-dependent RNA helicase DHX36 [Cajanus ca...    64   4e-10
GAU30409.1 hypothetical protein TSUD_364550 [Trifolium subterran...    63   1e-09
GAU33146.1 hypothetical protein TSUD_363470 [Trifolium subterran...    62   3e-09
KHN38137.1 Putative ATP-dependent RNA helicase DHX36 [Glycine soja]    60   1e-08
XP_006585701.1 PREDICTED: ATP-dependent RNA helicase DHX36-like ...    60   1e-08

>XP_004511172.1 PREDICTED: ATP-dependent RNA helicase DHX36 [Cicer arietinum]
          Length = 1149

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 46/71 (64%), Positives = 50/71 (70%), Gaps = 6/71 (8%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQL------HCVPSTSKTPLFRFQPSLLSSFIPTRLFSGSGYY 239
           M NPKSAASFLIARAK LQL        V S S++ LF+FQPSL S  I TR F  SGYY
Sbjct: 1   MHNPKSAASFLIARAKSLQLRHHYHYRSVTSISRSFLFKFQPSLSSPLIFTRFF--SGYY 58

Query: 240 ALEQFSDDEYD 272
            LEQFSDDEY+
Sbjct: 59  NLEQFSDDEYE 69


>XP_014524279.1 PREDICTED: ATP-dependent RNA helicase DHX36 [Vigna radiata var.
           radiata]
          Length = 1153

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 45/75 (60%), Positives = 50/75 (66%), Gaps = 10/75 (13%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQLH-----CVPSTS--KTPLFRFQPSLL---SSFIPTRLFSG 227
           MR+ K A S LIARAK LQLH     CV S+S   TPLFRF PS +   +S   TRLFS 
Sbjct: 1   MRSSKFAVSLLIARAKSLQLHHLTCHCVASSSPTSTPLFRFSPSSIRNANSVATTRLFSS 60

Query: 228 SGYYALEQFSDDEYD 272
             YY+LEQFSDDEYD
Sbjct: 61  --YYSLEQFSDDEYD 73


>XP_017433132.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Vigna
           angularis] BAT89648.1 hypothetical protein
           VIGAN_06065600 [Vigna angularis var. angularis]
          Length = 1153

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 44/75 (58%), Positives = 50/75 (66%), Gaps = 10/75 (13%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQLH-----CVPSTS--KTPLFRFQPSLL---SSFIPTRLFSG 227
           MR+ K A S LIARAK LQLH     CV S+S   TPLFRF PS +   ++   TRLFS 
Sbjct: 1   MRSSKFAVSLLIARAKSLQLHHLTCHCVASSSPTSTPLFRFFPSSIRNANAVATTRLFSS 60

Query: 228 SGYYALEQFSDDEYD 272
             YY+LEQFSDDEYD
Sbjct: 61  --YYSLEQFSDDEYD 73


>XP_007133512.1 hypothetical protein PHAVU_011G1853001g, partial [Phaseolus
           vulgaris] ESW05506.1 hypothetical protein
           PHAVU_011G1853001g, partial [Phaseolus vulgaris]
          Length = 491

 Score = 66.2 bits (160), Expect = 9e-11
 Identities = 43/77 (55%), Positives = 49/77 (63%), Gaps = 12/77 (15%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQL-----HCVPSTSKTP----LFRFQPSLL---SSFIPTRLF 221
           MRN K A S LIARAK LQL     HCV S+S +P    LFRF PS +    S   TRLF
Sbjct: 1   MRNSKFAVSLLIARAKSLQLHHHTCHCVASSSSSPTSTSLFRFLPSSIRNAKSVAATRLF 60

Query: 222 SGSGYYALEQFSDDEYD 272
             S YY++EQFSDDEY+
Sbjct: 61  --SSYYSVEQFSDDEYE 75


>KYP51609.1 putative ATP-dependent RNA helicase DHX36 [Cajanus cajan]
          Length = 587

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 43/76 (56%), Positives = 47/76 (61%), Gaps = 11/76 (14%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQLH-----CVPSTSK---TPLFRFQPSLLSS---FIPTRLFS 224
           MRN K AA  L+ARAK LQ H     C+PS+     TPLFRF  S L S      TRLFS
Sbjct: 1   MRNSKYAAFLLVARAKSLQRHHHTCRCLPSSYSSPATPLFRFWRSSLCSAKTLAATRLFS 60

Query: 225 GSGYYALEQFSDDEYD 272
              YY+LEQFSDDEYD
Sbjct: 61  S--YYSLEQFSDDEYD 74


>GAU30409.1 hypothetical protein TSUD_364550 [Trifolium subterraneum]
          Length = 383

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQL-----HCVPSTSKTPLFRFQPSLLSSFIPTRLFSGSGYYA 242
           M NPKSAASFLIARAK LQL       + STS++ LF       + FI TR F  SG+Y 
Sbjct: 1   MHNPKSAASFLIARAKSLQLRHHNYRFLTSTSRSLLF-------TPFISTRFF--SGHYN 51

Query: 243 LEQFSDDEYD 272
           +EQFSDDEYD
Sbjct: 52  IEQFSDDEYD 61


>GAU33146.1 hypothetical protein TSUD_363470 [Trifolium subterraneum]
          Length = 322

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
 Frame = +3

Query: 78  MRNPKSAASFLIARAKCLQL-----HCVPSTSKTPLFRFQPSLLSSFIPTRLFSGSGYYA 242
           M NPKSAASFLIARAKCLQL       + STS++ LF       + FI +R F  SG+  
Sbjct: 1   MHNPKSAASFLIARAKCLQLRHHNYRFLTSTSRSLLF-------TPFISSRFF--SGHCN 51

Query: 243 LEQFSDDEYD 272
           +EQFSDDEYD
Sbjct: 52  IEQFSDDEYD 61


>KHN38137.1 Putative ATP-dependent RNA helicase DHX36 [Glycine soja]
          Length = 1133

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 45/83 (54%), Positives = 47/83 (56%), Gaps = 18/83 (21%)
 Frame = +3

Query: 78  MRNPK-SAASFLIARAKCLQLH------CVP-----STSKTPLFRFQPSLLSSF------ 203
           MRN K  AAS LIARAK LQLH      C P     S +   LFRF    LSS       
Sbjct: 1   MRNSKLCAASLLIARAKSLQLHHRHVRHCFPPFSSSSATSISLFRFHHPWLSSLCNAKSL 60

Query: 204 IPTRLFSGSGYYALEQFSDDEYD 272
           I TRLFS   YY+LEQFSDDEYD
Sbjct: 61  ITTRLFSS--YYSLEQFSDDEYD 81


>XP_006585701.1 PREDICTED: ATP-dependent RNA helicase DHX36-like [Glycine max]
           KRH44757.1 hypothetical protein GLYMA_08G229400 [Glycine
           max]
          Length = 1161

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 45/83 (54%), Positives = 47/83 (56%), Gaps = 18/83 (21%)
 Frame = +3

Query: 78  MRNPK-SAASFLIARAKCLQLH------CVP-----STSKTPLFRFQPSLLSSF------ 203
           MRN K  AAS LIARAK LQLH      C P     S +   LFRF    LSS       
Sbjct: 1   MRNSKLCAASLLIARAKSLQLHHRHVRHCFPPFSSSSATSISLFRFHHPWLSSLCNAKSL 60

Query: 204 IPTRLFSGSGYYALEQFSDDEYD 272
           I TRLFS   YY+LEQFSDDEYD
Sbjct: 61  ITTRLFSS--YYSLEQFSDDEYD 81


Top