BLASTX nr result
ID: Glycyrrhiza28_contig00030174
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00030174
(210 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_024581308.1 MULTISPECIES: AraC family transcriptional regulat... 141 5e-40
WP_044537523.1 AraC family transcriptional regulator [Bradyrhizo... 126 5e-34
SFK65743.1 AraC-type DNA-binding protein [Rhodanobacter glycinis] 123 6e-33
WP_012384813.1 AraC family transcriptional regulator [Beijerinck... 124 6e-33
WP_008207455.1 AraC family transcriptional regulator [Rhodanobac... 122 2e-32
SEC25121.1 AraC-type DNA-binding protein [Bradyrhizobium erythro... 121 4e-32
SIO69323.1 transcriptional regulator, AraC family [Burkholderia ... 118 5e-31
WP_074287175.1 AraC family transcriptional regulator [Burkholder... 118 7e-31
SCX71920.1 transcriptional regulator, AraC family [Variovorax sp... 117 2e-30
WP_018424345.1 AraC family transcriptional regulator [Burkholder... 116 3e-30
WP_011494459.1 AraC family transcriptional regulator [Paraburkho... 116 4e-30
WP_031358696.1 AraC family transcriptional regulator [Caballeron... 115 6e-30
SIO58544.1 transcriptional regulator, AraC family [Paraburkholde... 115 1e-29
SEB12859.1 AraC-type DNA-binding protein [Paraburkholderia sarti... 115 1e-29
WP_066654053.1 AraC family transcriptional regulator [Bordetella... 115 1e-29
WP_060857452.1 AraC family transcriptional regulator [Caballeron... 114 2e-29
WP_074298776.1 AraC family transcriptional regulator [Paraburkho... 115 2e-29
WP_055139974.1 AraC family transcriptional regulator [Burkholder... 114 2e-29
WP_073468014.1 AraC family transcriptional regulator [Rhizobacte... 114 4e-29
WP_020066847.1 AraC family transcriptional regulator [Paraburkho... 113 5e-29
>WP_024581308.1 MULTISPECIES: AraC family transcriptional regulator
[Bradyrhizobium] KIU45792.1 AraC family transcriptional
regulator [Bradyrhizobium elkanii] OCX27188.1 AraC
family transcriptional regulator [Bradyrhizobium sp.
UASWS1016]
Length = 301
Score = 141 bits (356), Expect = 5e-40
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVD HEAIELRSGDFIL+
Sbjct: 10 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDVHEAIELRSGDFILV 69
Query: 181 PAAHGVAMSS 210
PAAHGVAMSS
Sbjct: 70 PAAHGVAMSS 79
>WP_044537523.1 AraC family transcriptional regulator [Bradyrhizobium sp. LTSP885]
KJC49132.1 AraC family transcriptional regulator
[Bradyrhizobium sp. LTSP885]
Length = 301
Score = 126 bits (316), Expect = 5e-34
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSKA+VGAG W +RRSDAGQPFYCVVLEGGCRLV+D HEAI L SGDF+LI
Sbjct: 9 VTLLQPGARFSKAIVGAGPWQVRRSDAGQPFYCVVLEGGCRLVIDGHEAITLCSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>SFK65743.1 AraC-type DNA-binding protein [Rhodanobacter glycinis]
Length = 300
Score = 123 bits (309), Expect = 6e-33
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSKAVVGAG WHIRRSDAGQPFYCVVLEGGCR +D H IEL++GDF L+
Sbjct: 9 VTLLQPSARFSKAVVGAGRWHIRRSDAGQPFYCVVLEGGCRATIDGHATIELQAGDFALV 68
Query: 181 PAAHGVAMSS 210
PAAHGVAMSS
Sbjct: 69 PAAHGVAMSS 78
>WP_012384813.1 AraC family transcriptional regulator [Beijerinckia indica]
ACB95456.1 transcriptional regulator, AraC family
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 319
Score = 124 bits (310), Expect = 6e-33
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSKAVVGAG+WH+RRSDAGQPFYCVVLEG CRLV+D E IELRSGDF+LI
Sbjct: 9 VTLLQPAARFSKAVVGAGSWHVRRSDAGQPFYCVVLEGACRLVLDGREPIELRSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GV MSS
Sbjct: 69 PAAYGVGMSS 78
>WP_008207455.1 AraC family transcriptional regulator [Rhodanobacter sp. 115]
EIM03976.1 AraC family transcriptional regulator
[Rhodanobacter sp. 115]
Length = 300
Score = 122 bits (306), Expect = 2e-32
Identities = 56/70 (80%), Positives = 61/70 (87%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSKAVVGAG WHIRRSDAGQPFYCVVLEGGCR +D H IEL++GDF L+
Sbjct: 9 VTLLQPSARFSKAVVGAGRWHIRRSDAGQPFYCVVLEGGCRATIDGHATIELQAGDFALV 68
Query: 181 PAAHGVAMSS 210
PA+HGVAMSS
Sbjct: 69 PASHGVAMSS 78
>SEC25121.1 AraC-type DNA-binding protein [Bradyrhizobium erythrophlei]
Length = 300
Score = 121 bits (303), Expect = 4e-32
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSKAVVGAGAWH+RRSDAGQPFYCVVLEGGCRL VD H AIEL +GDFIL+
Sbjct: 9 VTLLQPSARFSKAVVGAGAWHVRRSDAGQPFYCVVLEGGCRLEVDDHVAIELGAGDFILV 68
Query: 181 PAAHGVAMSS 210
PAA+ VA+SS
Sbjct: 69 PAAYDVAISS 78
>SIO69323.1 transcriptional regulator, AraC family [Burkholderia sp. GAS332]
Length = 301
Score = 118 bits (296), Expect = 5e-31
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V+GA WHI RSDAGQPFYCV+LEGGC + +D HE IEL SGDF+LI
Sbjct: 9 VTLLQPGARFSKLVLGASPWHISRSDAGQPFYCVILEGGCHIAIDGHEPIELLSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>WP_074287175.1 AraC family transcriptional regulator [Burkholderia sp. GAS332]
Length = 321
Score = 118 bits (296), Expect = 7e-31
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V+GA WHI RSDAGQPFYCV+LEGGC + +D HE IEL SGDF+LI
Sbjct: 29 VTLLQPGARFSKLVLGASPWHISRSDAGQPFYCVILEGGCHIAIDGHEPIELLSGDFVLI 88
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 89 PAAYGVAMSS 98
>SCX71920.1 transcriptional regulator, AraC family [Variovorax sp. EL159]
Length = 309
Score = 117 bits (292), Expect = 2e-30
Identities = 56/70 (80%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
VALLQP ARFSK VVGAG W IRRSDAGQPFYC VLEGGCRL +D HE I L++GDF+LI
Sbjct: 15 VALLQPAARFSKHVVGAGPWQIRRSDAGQPFYCAVLEGGCRLALDGHEEIVLQAGDFVLI 74
Query: 181 PAAHGVAMSS 210
PAA GVAMSS
Sbjct: 75 PAAFGVAMSS 84
>WP_018424345.1 AraC family transcriptional regulator [Burkholderia sp. WSM4176]
Length = 305
Score = 116 bits (291), Expect = 3e-30
Identities = 55/70 (78%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V GA WHI RS AGQPFYCV+LEGGCR+ +D HEAIEL SGDF+LI
Sbjct: 9 VTLLQPGARFSKLVHGASPWHICRSVAGQPFYCVILEGGCRIAIDGHEAIELLSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>WP_011494459.1 AraC family transcriptional regulator [Paraburkholderia xenovorans]
ABE37233.1 transcriptional regulator, AraC family
[Paraburkholderia xenovorans LB400] AIP33884.1
helix-turn-helix domain protein [Paraburkholderia
xenovorans LB400]
Length = 305
Score = 116 bits (290), Expect = 4e-30
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK ++GA +WH+ RSD+GQP YCV+LEGGCR+ +D HE IEL SGDF+LI
Sbjct: 9 VTLLQPGARFSKLILGASSWHVSRSDSGQPLYCVILEGGCRMAIDEHEPIELVSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>WP_031358696.1 AraC family transcriptional regulator [Caballeronia sordidicola]
Length = 305
Score = 115 bits (289), Expect = 6e-30
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V+GA W + RSDAGQPFYCV+LEG CR+V+D HE IEL SGDF+LI
Sbjct: 9 VTLLQPGARFSKLVLGASPWRVSRSDAGQPFYCVILEGACRMVIDGHEPIELVSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>SIO58544.1 transcriptional regulator, AraC family [Paraburkholderia
phenazinium]
Length = 304
Score = 115 bits (287), Expect = 1e-29
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V+GAGAW + RSDAG+PFYC +LEGG R+ +D HE I LRSGDF+LI
Sbjct: 9 VTLLQPGARFSKLVLGAGAWRVSRSDAGEPFYCAILEGGSRIAIDGHEPIALRSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>SEB12859.1 AraC-type DNA-binding protein [Paraburkholderia sartisoli]
Length = 305
Score = 115 bits (287), Expect = 1e-29
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V+GA W I RSDAGQPFYCV+LEGGCR+ +D H IEL SGDF+LI
Sbjct: 9 VTLLQPGARFSKLVLGASPWRISRSDAGQPFYCVILEGGCRIAIDGHAPIELLSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>WP_066654053.1 AraC family transcriptional regulator [Bordetella flabilis]
ANN76254.1 AraC family transcriptional regulator
[Bordetella flabilis]
Length = 318
Score = 115 bits (287), Expect = 1e-29
Identities = 56/70 (80%), Positives = 61/70 (87%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
VALLQP ARFSK VVGAG W IRRSDAGQPFYCVVLEGGC+L +D +E I L+SGDF+LI
Sbjct: 9 VALLQPAARFSKHVVGAGPWKIRRSDAGQPFYCVVLEGGCQLALDGNEPIVLQSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA GVAMSS
Sbjct: 69 PAAFGVAMSS 78
>WP_060857452.1 AraC family transcriptional regulator [Caballeronia sordidicola]
SAL41015.1 AraC family transcriptional regulator
[Caballeronia sordidicola]
Length = 305
Score = 114 bits (286), Expect = 2e-29
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSK V GA WH+ RSD GQPFYCV+LEGGCR+ +D HE +EL SGDF+LI
Sbjct: 9 VTLLQPSARFSKLVFGASPWHVNRSDTGQPFYCVILEGGCRIAIDGHEPLELISGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>WP_074298776.1 AraC family transcriptional regulator [Paraburkholderia
phenazinium]
Length = 324
Score = 115 bits (287), Expect = 2e-29
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGARFSK V+GAGAW + RSDAG+PFYC +LEGG R+ +D HE I LRSGDF+LI
Sbjct: 29 VTLLQPGARFSKLVLGAGAWRVSRSDAGEPFYCAILEGGSRIAIDGHEPIALRSGDFVLI 88
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 89 PAAYGVAMSS 98
>WP_055139974.1 AraC family transcriptional regulator [Burkholderia plantarii]
ALK33050.1 AraC family transcriptional regulator
[Burkholderia plantarii]
Length = 306
Score = 114 bits (285), Expect = 2e-29
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQPGAR+SK V GA W + RSDAGQPFYCV+LEGGCRL +DAH +EL SGDF+LI
Sbjct: 9 VTLLQPGARYSKLVHGASPWRVSRSDAGQPFYCVILEGGCRLTIDAHSPMELHSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78
>WP_073468014.1 AraC family transcriptional regulator [Rhizobacter sp. OV335]
SHN30945.1 AraC-type DNA-binding protein [Rhizobacter
sp. OV335]
Length = 314
Score = 114 bits (284), Expect = 4e-29
Identities = 55/70 (78%), Positives = 59/70 (84%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSK VVGAG W IRRSDAGQPFYCVVLEG CRL +D HE I L++GDF+LI
Sbjct: 9 VTLLQPTARFSKHVVGAGRWQIRRSDAGQPFYCVVLEGSCRLALDGHEPIVLQTGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA GVAMSS
Sbjct: 69 PAAFGVAMSS 78
>WP_020066847.1 AraC family transcriptional regulator [Paraburkholderia bryophila]
Length = 306
Score = 113 bits (283), Expect = 5e-29
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 1 VALLQPGARFSKAVVGAGAWHIRRSDAGQPFYCVVLEGGCRLVVDAHEAIELRSGDFILI 180
V LLQP ARFSK V GA W I RSDAGQPFYCV+LEGGCR+ +D H+ IEL SGDF+LI
Sbjct: 9 VTLLQPSARFSKLVFGASPWRISRSDAGQPFYCVILEGGCRIAIDGHDPIELTSGDFVLI 68
Query: 181 PAAHGVAMSS 210
PAA+GVAMSS
Sbjct: 69 PAAYGVAMSS 78