BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00029798
         (506 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP33949.1 Retrovirus-related Pol polyprotein from transposon TN...    62   3e-08
XP_014629578.1 PREDICTED: uncharacterized protein LOC106798138 [...    62   4e-08
KYP33405.1 Retrovirus-related Pol polyprotein from transposon TN...    58   8e-08
KYP74810.1 Retrovirus-related Pol polyprotein from transposon TN...    56   4e-06
KYP75905.1 Retrovirus-related Pol polyprotein from transposon TN...    56   5e-06

>KYP33949.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 534

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = -2

Query: 397 SRFGHISDKALCVLSNKIPF---VTFDYSSSTLCQVSSWKI*FKRLSFPSFSHVSNSTFE 227
           SRFGH++D  L +LSNKIPF    ++  SS  +C +S     F++L F S ++  ++ F+
Sbjct: 324 SRFGHVNDTVLKILSNKIPFSMPTSYSSSSCHICPISK----FRKLPFVSHNNFCSTPFD 379

Query: 226 LLHCDIWG 203
           L+HCD+WG
Sbjct: 380 LVHCDVWG 387


>XP_014629578.1 PREDICTED: uncharacterized protein LOC106798138 [Glycine max]
          Length = 453

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
 Frame = -2

Query: 397 SRFGHISDKALCVLSNKIPF---VTFDYSSSTLCQVSSWKI*FKRLSFPSFSHVSNSTFE 227
           SR GHISDK    LSNKI       F  S+ ++C ++     F+RLSFP+ +H+S  +F+
Sbjct: 274 SRSGHISDKVFKHLSNKIGLHLSPNFSSSNCSVCPLAK----FRRLSFPNSNHLSKLSFD 329

Query: 226 LLHCDIWG 203
           L+HCDIWG
Sbjct: 330 LIHCDIWG 337


>KYP33405.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 309

 Score = 57.8 bits (138), Expect(2) = 8e-08
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = -2

Query: 397 SRFGHISDKALCVLSNKIPFV---TFDYSSSTLCQVSSWKI*FKRLSFPSFSHVSNSTFE 227
           +R GH+SDK L ++SNK+  V   +FD S+  +C ++      KRL F   ++  +S F+
Sbjct: 145 NRLGHVSDKILRLISNKLDLVVPASFDSSNCNICPLTK----LKRLPFTCHNNFFDSIFD 200

Query: 226 LLHCDIWG 203
           LLHCDIWG
Sbjct: 201 LLHCDIWG 208



 Score = 25.8 bits (55), Expect(2) = 8e-08
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 447 CNHISVSHKCNNAYLWHQDL 388
           CN++  +  CN A LWH  L
Sbjct: 128 CNNVVNASACNKATLWHNRL 147


>KYP74810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 669

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -2

Query: 394 RFGHISDKALCVLSNKIPFVTFDYSSSTLCQVSSWKI*FKRLSFPSFSHVSNSTFELLHC 215
           RFGH++D  L  LSNK+PF         +C V+     FKRL F   +H     F+L+HC
Sbjct: 199 RFGHVNDLVLKTLSNKVPFTICH-----ICPVAK----FKRLPFQCHNHFCTKPFDLIHC 249

Query: 214 DIWG 203
           D+WG
Sbjct: 250 DVWG 253


>KYP75905.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 594

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = -2

Query: 397 SRFGHISDKALCVLSNKIPF---VTFDYSSSTLCQVSSWKI*FKRLSFPSFSHVSNSTFE 227
           SRFGH++D  L +LSNKIPF    ++  SS  +C +S     F++L F S ++  ++ F+
Sbjct: 507 SRFGHVNDTVLKILSNKIPFSMPTSYSSSSCHICPISK----FRKLPFVSHNNFCSTPFD 562

Query: 226 LLHCDI 209
           L+HCD+
Sbjct: 563 LVHCDV 568