BLASTX nr result

ID: Glycyrrhiza28_contig00029796 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00029796
         (285 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EIZ86444.1 elongation factor Tu, partial [Methylobacterium sp. G...   108   4e-27
SFL46610.1 elongation factor Tu, partial [Methylobacterium salsu...   109   1e-26
WP_051061531.1 elongation factor Tu, partial [Methylobacterium s...   109   1e-26
WP_017482583.1 elongation factor Tu, partial [Methylobacterium p...   109   1e-26
SDO39688.1 translation elongation factor 1A (EF-1A/EF-Tu), parti...   108   1e-26
WP_074126943.1 translation elongation factor Tu [Bradyrhizobium ...   109   1e-26
BAU93482.1 elongation factor Tu [Methylobacterium populi]             109   1e-26
WP_066499402.1 translation elongation factor Tu [Bradyrhizobium ...   109   1e-26
WP_021081658.1 MULTISPECIES: elongation factor Tu [Bradyrhizobiu...   109   1e-26
WP_012454025.1 MULTISPECIES: elongation factor Tu [Methylobacter...   109   1e-26
WP_012456596.1 MULTISPECIES: elongation factor Tu [Methylobacter...   109   1e-26
WP_016843743.1 hypothetical protein, partial [Bradyrhizobium elk...   107   2e-26
WP_066923801.1 elongation factor Tu, partial [Methylobacterium s...   108   3e-26
CEJ13274.1 Elongation factor Tu [bacterium YEK0313] CEJ13290.1 E...   108   4e-26
SFE40172.1 translation elongation factor TU, partial [Methylobac...   104   7e-26
SFF00578.1 translation elongation factor TU, partial [Methylobac...   104   7e-26
WP_050732917.1 elongation factor Tu [Methylobacterium sp. ARG-1]...   107   7e-26
SFT28702.1 translation elongation factor TU, partial [Methylobac...   104   9e-26
WP_028339316.1 MULTISPECIES: elongation factor Tu [Bradyrhizobium]    107   1e-25
WP_018272140.1 MULTISPECIES: elongation factor Tu [Bradyrhizobiu...   107   1e-25

>EIZ86444.1 elongation factor Tu, partial [Methylobacterium sp. GXF4]
          Length = 239

 Score =  108 bits (269), Expect = 4e-27
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIG+DAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 10  DIPITKGSALMALEDKEPKIGKDAVLKLMETVDSYIPQPERPIDLPFLMPIEDVFSIS 67


>SFL46610.1 elongation factor Tu, partial [Methylobacterium salsuginis]
           SFL20833.1 translation elongation factor 1A
           (EF-1A/EF-Tu), partial [Methylobacterium salsuginis]
          Length = 369

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 140 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDMPFLMPIEDVFSIS 197


>WP_051061531.1 elongation factor Tu, partial [Methylobacterium sp. MB200]
          Length = 382

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 153 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDMPFLMPIEDVFSIS 210


>WP_017482583.1 elongation factor Tu, partial [Methylobacterium populi]
          Length = 387

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 158 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDMPFLMPIEDVFSIS 215


>SDO39688.1 translation elongation factor 1A (EF-1A/EF-Tu), partial
           [Methylobacterium phyllostachyos]
          Length = 301

 Score =  108 bits (269), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 60/93 (64%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXX 184
           DIPITKGSALMALEDKEPKIG+DAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS  
Sbjct: 72  DIPITKGSALMALEDKEPKIGKDAVLKLMETVDAYIPQPERPIDLPFLMPIEDVFSISGR 131

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                    DTQ T VT
Sbjct: 132 GTVVTGRVERGIVKVGETVEIVGIRDTQTTTVT 164


>WP_074126943.1 translation elongation factor Tu [Bradyrhizobium sp. NAS96.2]
           OKO79520.1 elongation factor Tu [Bradyrhizobium sp.
           NAS96.2]
          Length = 396

 Score =  109 bits (273), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 62/93 (66%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXX 184
           DIPI KGSAL ALEDK+ K+G DA+L+LMRNVDEYIPQPERPIDQPFLMPVEDVFSIS  
Sbjct: 167 DIPIIKGSALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGR 226

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                    DTQKTIVT
Sbjct: 227 GTVVTGRVERGVIKVGEEIEIVGIRDTQKTIVT 259


>BAU93482.1 elongation factor Tu [Methylobacterium populi]
          Length = 396

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 167 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDMPFLMPIEDVFSIS 224


>WP_066499402.1 translation elongation factor Tu [Bradyrhizobium sp. BR 10303]
           KWV60750.1 elongation factor Tu [Bradyrhizobium sp. BR
           10303]
          Length = 396

 Score =  109 bits (273), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 62/93 (66%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXX 184
           DIPI KGSAL ALEDK+ K+G DA+L+LMRNVDEYIPQPERPIDQPFLMPVEDVFSIS  
Sbjct: 167 DIPIIKGSALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGR 226

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                    DTQKTIVT
Sbjct: 227 GTVVTGRVERGIIKVGDEIEIVGLRDTQKTIVT 259


>WP_021081658.1 MULTISPECIES: elongation factor Tu [Bradyrhizobium] ERF85042.1
           elongation factor Tu [Bradyrhizobium sp. DFCI-1]
           KIU50588.1 elongation factor Tu [Bradyrhizobium elkanii]
           OCX27326.1 translation elongation factor Tu
           [Bradyrhizobium sp. UASWS1016]
          Length = 396

 Score =  109 bits (273), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 62/93 (66%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXX 184
           DIPI KGSAL ALEDK+ K+G DA+L+LMRNVDEYIPQPERPIDQPFLMPVEDVFSIS  
Sbjct: 167 DIPIIKGSALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGR 226

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                    DTQKTIVT
Sbjct: 227 GTVVTGRVERGVIKVGEEIEIVGIRDTQKTIVT 259


>WP_012454025.1 MULTISPECIES: elongation factor Tu [Methylobacterium] ACB80283.1
           translation elongation factor Tu [Methylobacterium
           populi BJ001] BAU90875.1 elongation factor Tu
           [Methylobacterium populi]
          Length = 396

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 167 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDMPFLMPIEDVFSIS 224


>WP_012456596.1 MULTISPECIES: elongation factor Tu [Methylobacterium] ACB82998.1
           translation elongation factor Tu [Methylobacterium
           populi BJ001]
          Length = 396

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 167 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDMPFLMPIEDVFSIS 224


>WP_016843743.1 hypothetical protein, partial [Bradyrhizobium elkanii]
          Length = 283

 Score =  107 bits (267), Expect = 2e-26
 Identities = 57/92 (61%), Positives = 61/92 (66%)
 Frame = +2

Query: 8   IPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXXX 187
           IPI KGSAL ALEDK+ K+G DA+L+LMRNVDEYIPQPERPIDQPFLMPVEDVFSIS   
Sbjct: 55  IPIIKGSALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRG 114

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                   DTQKTIVT
Sbjct: 115 TVVTGRVERGVIKVGEEIEIVGIRDTQKTIVT 146


>WP_066923801.1 elongation factor Tu, partial [Methylobacterium sp. CCH5-D2]
          Length = 396

 Score =  108 bits (271), Expect = 3e-26
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIGRDAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 167 DIPITKGSALMALEDKEPKIGRDAVLKLMETVDAYIPQPERPIDLPFLMPIEDVFSIS 224


>CEJ13274.1 Elongation factor Tu [bacterium YEK0313] CEJ13290.1 Elongation
           factor Tu [bacterium YEK0313]
          Length = 396

 Score =  108 bits (270), Expect = 4e-26
 Identities = 57/93 (61%), Positives = 61/93 (65%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXX 184
           DIPITKGSAL ALED+EP IGRDAVLKLM+ VDEYIPQPERP+DQPFLMP+EDVFSIS  
Sbjct: 167 DIPITKGSALCALEDREPAIGRDAVLKLMQTVDEYIPQPERPVDQPFLMPIEDVFSISGR 226

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                    DT KT VT
Sbjct: 227 GTVVTGRVERGIVKVGEEVEIVGIKDTAKTTVT 259


>SFE40172.1 translation elongation factor TU, partial [Methylobacterium sp.
           13MFTsu3.1M2]
          Length = 233

 Score =  104 bits (260), Expect = 7e-26
 Identities = 50/58 (86%), Positives = 53/58 (91%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIG++AVL LM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 4   DIPITKGSALMALEDKEPKIGKEAVLALMATVDSYIPQPERPIDMPFLMPIEDVFSIS 61


>SFF00578.1 translation elongation factor TU, partial [Methylobacterium sp.
           13MFTsu3.1M2]
          Length = 233

 Score =  104 bits (260), Expect = 7e-26
 Identities = 50/58 (86%), Positives = 53/58 (91%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIG++AVL LM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 4   DIPITKGSALMALEDKEPKIGKEAVLALMATVDSYIPQPERPIDMPFLMPIEDVFSIS 61


>WP_050732917.1 elongation factor Tu [Methylobacterium sp. ARG-1] KNY20549.1
           elongation factor Tu [Methylobacterium sp. ARG-1]
           KNY23263.1 elongation factor Tu [Methylobacterium sp.
           ARG-1]
          Length = 396

 Score =  107 bits (268), Expect = 7e-26
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIG+DAVLKLM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 167 DIPITKGSALMALEDKEPKIGKDAVLKLMETVDAYIPQPERPIDLPFLMPIEDVFSIS 224


>SFT28702.1 translation elongation factor TU, partial [Methylobacterium sp.
           yr668] SFT09607.1 translation elongation factor TU,
           partial [Methylobacterium sp. yr668]
          Length = 246

 Score =  104 bits (260), Expect = 9e-26
 Identities = 50/58 (86%), Positives = 53/58 (91%)
 Frame = +2

Query: 5   DIPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSIS 178
           DIPITKGSALMALEDKEPKIG++AVL LM  VD YIPQPERPID PFLMP+EDVFSIS
Sbjct: 167 DIPITKGSALMALEDKEPKIGKEAVLALMATVDSYIPQPERPIDMPFLMPIEDVFSIS 224


>WP_028339316.1 MULTISPECIES: elongation factor Tu [Bradyrhizobium]
          Length = 396

 Score =  107 bits (267), Expect = 1e-25
 Identities = 57/92 (61%), Positives = 61/92 (66%)
 Frame = +2

Query: 8   IPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXXX 187
           IPI KGSAL ALEDK+ K+G DA+L+LMRNVDEYIPQPERPIDQPFLMPVEDVFSIS   
Sbjct: 168 IPIIKGSALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRG 227

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                   DTQKTIVT
Sbjct: 228 TVVTGRVERGVIKVGEEIEIVGIRDTQKTIVT 259


>WP_018272140.1 MULTISPECIES: elongation factor Tu [Bradyrhizobium] KRP88071.1
           elongation factor Tu [Bradyrhizobium pachyrhizi]
           ODM74859.1 elongation factor Tu [Bradyrhizobium elkanii]
           ODM79421.1 elongation factor Tu [Bradyrhizobium elkanii]
           SDD19494.1 translation elongation factor 1A
           (EF-1A/EF-Tu) [Bradyrhizobium sp. R5] OIM95532.1
           translation elongation factor Tu [Bradyrhizobium
           elkanii] OMI03744.1 translation elongation factor Tu
           [Bradyrhizobium sp. UFLA 03-321]
          Length = 396

 Score =  107 bits (267), Expect = 1e-25
 Identities = 57/92 (61%), Positives = 61/92 (66%)
 Frame = +2

Query: 8   IPITKGSALMALEDKEPKIGRDAVLKLMRNVDEYIPQPERPIDQPFLMPVEDVFSISXXX 187
           IPI KGSAL ALEDK+ K+G DA+L+LMRNVDEYIPQPERPIDQPFLMPVEDVFSIS   
Sbjct: 168 IPIIKGSALAALEDKDKKLGHDAILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRG 227

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXDTQKTIVT 283
                                   DTQKTIVT
Sbjct: 228 TVVTGRVERGVIKVGEEIEIVGIRDTQKTIVT 259


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