BLASTX nr result
ID: Glycyrrhiza28_contig00029599
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00029599
(331 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_050626873.1 RDD family protein [Bradyrhizobium viridifuturi] 182 7e-56
KJC57242.1 hypothetical protein UP10_29670 [Bradyrhizobium sp. L... 167 5e-50
WP_044541009.1 RDD family protein [Bradyrhizobium sp. LTSP885] K... 167 5e-50
WP_044590729.1 RDD family protein [Bradyrhizobium sp. LTSPM299] 167 5e-50
SHK45535.1 Uncharacterized membrane protein YckC, RDD family [Br... 148 2e-42
SFL33519.1 RDD family protein [Bradyrhizobium sp. NFR13] 120 2e-31
SCB44110.1 Uncharacterized membrane protein YckC, RDD family [Br... 117 1e-30
WP_027547526.1 RDD family protein [Bradyrhizobium sp. WSM2254] 117 2e-30
WP_050044820.1 RDD family protein [Bradyrhizobium sp. LTSP849] 109 2e-27
WP_050031579.1 RDD family protein [Bradyrhizobium sp. LTSP857] 109 2e-27
WP_051383649.1 RDD family protein [Bradyrhizobium sp. WSM3983] 106 4e-26
WP_027520862.1 RDD family protein [Bradyrhizobium sp. Ec3.3] 101 2e-24
WP_068988840.1 RDD family protein [Candidatus Thiodiazotropha en... 62 3e-09
ODB99933.1 hypothetical protein A3197_05965 [Candidatus Thiodiaz... 62 3e-09
WP_069003402.1 hypothetical protein [Candidatus Thiodiazotropha ... 54 4e-07
WP_053971385.1 RDD family protein [Mangrovimonas sp. ST2L15] 53 1e-06
SCY40755.1 RDD family protein [Nonlabens sp. Hel1_33_55] 52 6e-06
WP_010516962.1 RDD family protein [Mesoflavibacter zeaxanthinifa... 51 7e-06
>WP_050626873.1 RDD family protein [Bradyrhizobium viridifuturi]
Length = 248
Score = 182 bits (462), Expect = 7e-56
Identities = 94/109 (86%), Positives = 95/109 (87%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRRFRGIFIDWIVTL+ IAGALL ASTVAIDSVSR LYEPVLVSFTGG
Sbjct: 21 RFSRRFRGIFIDWIVTLLTIAGALLVASTVAIDSVSRALGFAVIAALVLYEPVLVSFTGG 80
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
TVGHHLTNLRVVDDATGGNVGFLKACARLLIK FLGWYSFVIIAATRRN
Sbjct: 81 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKSFLGWYSFVIIAATRRN 129
>KJC57242.1 hypothetical protein UP10_29670 [Bradyrhizobium sp. LTSPM299]
Length = 244
Score = 167 bits (423), Expect = 5e-50
Identities = 83/109 (76%), Positives = 90/109 (82%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRRFRGIFIDW +TL+ I GALL ASTVA D++SR LYEP+LVSFTGG
Sbjct: 19 RFSRRFRGIFIDWAITLIVIFGALLVASTVATDTLSRALGIVVIAVLLLYEPILVSFTGG 78
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
TVGHHLTNLRVVDDATGGNVGF KACARLL+K LGWYSFVI+AATRRN
Sbjct: 79 TVGHHLTNLRVVDDATGGNVGFPKACARLLLKSLLGWYSFVILAATRRN 127
>WP_044541009.1 RDD family protein [Bradyrhizobium sp. LTSP885] KJC39189.1
hypothetical protein UP09_25310 [Bradyrhizobium sp.
LTSP885]
Length = 244
Score = 167 bits (423), Expect = 5e-50
Identities = 83/109 (76%), Positives = 90/109 (82%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRRFRGIFIDW +TL+ I GALL ASTVA D++SR LYEP+LVSFTGG
Sbjct: 19 RFSRRFRGIFIDWAITLIVIFGALLVASTVATDTLSRALGIVVIAVLLLYEPILVSFTGG 78
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
TVGHHLTNLRVVDDATGGNVGF KACARLL+K LGWYSFVI+AATRRN
Sbjct: 79 TVGHHLTNLRVVDDATGGNVGFPKACARLLLKSLLGWYSFVILAATRRN 127
>WP_044590729.1 RDD family protein [Bradyrhizobium sp. LTSPM299]
Length = 247
Score = 167 bits (423), Expect = 5e-50
Identities = 83/109 (76%), Positives = 90/109 (82%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRRFRGIFIDW +TL+ I GALL ASTVA D++SR LYEP+LVSFTGG
Sbjct: 22 RFSRRFRGIFIDWAITLIVIFGALLVASTVATDTLSRALGIVVIAVLLLYEPILVSFTGG 81
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
TVGHHLTNLRVVDDATGGNVGF KACARLL+K LGWYSFVI+AATRRN
Sbjct: 82 TVGHHLTNLRVVDDATGGNVGFPKACARLLLKSLLGWYSFVILAATRRN 130
>SHK45535.1 Uncharacterized membrane protein YckC, RDD family [Bradyrhizobium
lablabi]
Length = 239
Score = 148 bits (373), Expect = 2e-42
Identities = 71/109 (65%), Positives = 87/109 (79%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRR RGI +DWI+TLV I GA+L A+TVA D++SR LYEPVLVSFTGG
Sbjct: 17 RFSRRVRGIMLDWIITLVVIFGAVLVATTVANDNLSRALGTLVVIALVLYEPVLVSFTGG 76
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH+ +NLRVVD+ +GGNV FLKACAR++IKG LGWYSF+++ ATRRN
Sbjct: 77 TLGHYFSNLRVVDEHSGGNVSFLKACARMIIKGVLGWYSFIVMTATRRN 125
>SFL33519.1 RDD family protein [Bradyrhizobium sp. NFR13]
Length = 244
Score = 120 bits (300), Expect = 2e-31
Identities = 57/109 (52%), Positives = 73/109 (66%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RF RR +GIFIDW+V+LV I G + A ++ + SR LYEPVLVS TG
Sbjct: 17 RFGRRLKGIFIDWVVSLVLIFGTMFLAISIGDQTSSRVFGIVAVAIALLYEPVLVSLTGS 76
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH++TNLRVVD T GN+ F+KA R ++K LGWYSF+ + ATRRN
Sbjct: 77 TLGHYMTNLRVVDQGTSGNISFVKAVGRFVLKSLLGWYSFIAMMATRRN 125
>SCB44110.1 Uncharacterized membrane protein YckC, RDD family [Bradyrhizobium
sp. err11]
Length = 239
Score = 117 bits (294), Expect = 1e-30
Identities = 61/109 (55%), Positives = 74/109 (67%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRRF+ + +DW++ + + GAL AS VA D +SR LYEPVLV GG
Sbjct: 15 RFSRRFKAVLLDWMLAMALLFGALAIASNVASDGLSRILGVAVVVILLLYEPVLVWRAGG 74
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH TNLRV+DD GGN+ F KA AR +KG LGWYSFVI+AATRRN
Sbjct: 75 TLGHIWTNLRVIDD-RGGNLSFAKAFARSAVKGILGWYSFVILAATRRN 122
>WP_027547526.1 RDD family protein [Bradyrhizobium sp. WSM2254]
Length = 241
Score = 117 bits (293), Expect = 2e-30
Identities = 60/109 (55%), Positives = 75/109 (68%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRR + I +DW++ +V + GAL AS VA D+++R LYEPVLVS GG
Sbjct: 17 RFSRRLKAILLDWMLAMVLLFGALAVASNVASDALARTLGVAIVVILLLYEPVLVSRAGG 76
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH TNLRVVDD GGN+ F KA AR ++K LGWYSFV++ ATRRN
Sbjct: 77 TLGHIWTNLRVVDDG-GGNLSFAKALARFVVKSVLGWYSFVVMTATRRN 124
>WP_050044820.1 RDD family protein [Bradyrhizobium sp. LTSP849]
Length = 240
Score = 109 bits (273), Expect = 2e-27
Identities = 57/109 (52%), Positives = 72/109 (66%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRR + I +DW++ +V + GAL AS D+++R LYEP+LV TGG
Sbjct: 16 RFSRRLKAILLDWMLAMVLLFGALAVASNAQSDALARTLGVSVVVILLLYEPILVWRTGG 75
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH TNLRVVDD GG++ F KA AR IK LGWYSF+ +AATRRN
Sbjct: 76 TLGHAWTNLRVVDD-RGGHLSFAKALARFAIKSLLGWYSFLTMAATRRN 123
>WP_050031579.1 RDD family protein [Bradyrhizobium sp. LTSP857]
Length = 240
Score = 109 bits (273), Expect = 2e-27
Identities = 57/109 (52%), Positives = 72/109 (66%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRR + I +DW++ +V + GAL AS D+++R LYEP+LV TGG
Sbjct: 16 RFSRRLKAILLDWMLAMVLLFGALAVASNAQSDALARTLGVSVVVILLLYEPILVWRTGG 75
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH TNLRVVDD GG++ F KA AR IK LGWYSF+ +AATRRN
Sbjct: 76 TLGHAWTNLRVVDD-RGGHLSFAKALARFAIKSLLGWYSFLTMAATRRN 123
>WP_051383649.1 RDD family protein [Bradyrhizobium sp. WSM3983]
Length = 241
Score = 106 bits (264), Expect = 4e-26
Identities = 54/109 (49%), Positives = 71/109 (65%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRR R +F+DW ++L + GAL+ AS V D+++R LYEP+LVS G
Sbjct: 16 RFSRRLRAMFLDWTLSLALVFGALIVASNVESDTLARVLGAVVVLILVLYEPLLVSRVGS 75
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH+ TNLRVV D GGN+ F +A R +K LGWYSF+ + ATRRN
Sbjct: 76 TLGHYWTNLRVVAD-NGGNLSFPRALGRFALKSLLGWYSFLSMGATRRN 123
>WP_027520862.1 RDD family protein [Bradyrhizobium sp. Ec3.3]
Length = 240
Score = 101 bits (252), Expect = 2e-24
Identities = 52/109 (47%), Positives = 68/109 (62%)
Frame = -3
Query: 329 RFSRRFRGIFIDWIVTLVAIAGALLAASTVAIDSVSRXXXXXXXXXXXLYEPVLVSFTGG 150
RFSRR + I +DW++ + + GA+ AS D+++R LYEPVLV +TGG
Sbjct: 16 RFSRRLKAILLDWMLAMALLFGAVALASNAQSDTLARILGVSVVVILLLYEPVLVWWTGG 75
Query: 149 TVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
T+GH N RVVDD GGN+ KA AR +K LGWYSF+ + ATRRN
Sbjct: 76 TLGHFWANSRVVDD-HGGNLSLAKALARFAVKSVLGWYSFLTMTATRRN 123
>WP_068988840.1 RDD family protein [Candidatus Thiodiazotropha endoloripes]
Length = 233
Score = 62.0 bits (149), Expect = 3e-09
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = -3
Query: 179 EPVLVSFTGGTVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
+PVLVSFTGGT GHHL ++ V+ + +G L++ R L+K GW+SF+ + T+R+
Sbjct: 58 DPVLVSFTGGTPGHHLRHIMVLKHSGNAKLGILQSLIRSLLKAVTGWWSFIFVLMTKRH 116
>ODB99933.1 hypothetical protein A3197_05965 [Candidatus Thiodiazotropha
endoloripes]
Length = 243
Score = 62.0 bits (149), Expect = 3e-09
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = -3
Query: 179 EPVLVSFTGGTVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRRN 3
+PVLVSFTGGT GHHL ++ V+ + +G L++ R L+K GW+SF+ + T+R+
Sbjct: 68 DPVLVSFTGGTPGHHLRHIMVLKHSGNAKLGILQSLIRSLLKAVTGWWSFIFVLMTKRH 126
>WP_069003402.1 hypothetical protein [Candidatus Thiodiazotropha endoloripes]
ODB84181.1 hypothetical protein A3193_15270 [Candidatus
Thiodiazotropha endoloripes] ODB91451.1 hypothetical
protein A3195_08630 [Candidatus Thiodiazotropha
endoloripes] ODB95869.1 hypothetical protein A3196_03305
[Candidatus Thiodiazotropha endoloripes]
Length = 108
Score = 53.9 bits (128), Expect = 4e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = -3
Query: 179 EPVLVSFTGGTVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATR 9
+P+LVSF+GGT GHHL ++ VV + +G L++ + L+K W+SFV + T+
Sbjct: 5 DPLLVSFSGGTPGHHLRHIMVVKHSGHAKLGILQSLIQSLLKAITDWWSFVFVLMTK 61
>WP_053971385.1 RDD family protein [Mangrovimonas sp. ST2L15]
Length = 128
Score = 53.1 bits (126), Expect = 1e-06
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = -3
Query: 182 YEPVLVSFTGGTVGHHLTNLRVVDDATGGNVGFLKACARLLIKGFLGWYSFVI 24
YEP+ VSF G T+GH T L V D T + F KA R +K LGW SFVI
Sbjct: 54 YEPLFVSFYGATMGHGFTKLIVQDIETQKKINFPKALIRFALKVLLGWLSFVI 106
>SCY40755.1 RDD family protein [Nonlabens sp. Hel1_33_55]
Length = 139
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = -3
Query: 182 YEPVLVSFTGGTVGHHLTNLRV-VDDATGGNVGFLKACARLLIKGFLGWYSFVIIAATR 9
YEP++VS GGT+GH +++ V ++ N+ F KA R +IK LGW S V I+ T+
Sbjct: 64 YEPLMVSLFGGTIGHMFSDITVRQENQPHENINFFKALVRWIIKVLLGWLSLVTISMTK 122
>WP_010516962.1 RDD family protein [Mesoflavibacter zeaxanthinifaciens]
Length = 132
Score = 51.2 bits (121), Expect = 7e-06
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 182 YEPVLVSFTGGTVGHHLTNLRVV-DDATGGNVGFLKACARLLIKGFLGWYSFVIIAATRR 6
YEP+ VS GGT+GH + L V D+ GN+ F A R + K FLGW S + + + +
Sbjct: 55 YEPLFVSQFGGTIGHSYSGLMVKRDNLLCGNINFFMALIRFIFKAFLGWISLLTVTSNNK 114