BLASTX nr result

ID: Glycyrrhiza28_contig00029533 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00029533
         (444 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN07014.1 Pentatricopeptide repeat-containing protein, chloropl...    57   8e-07
XP_003527773.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   4e-06
KOM42073.1 hypothetical protein LR48_Vigan04g227100 [Vigna angul...    55   7e-06
XP_017422433.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   7e-06

>KHN07014.1 Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 1113

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/63 (50%), Positives = 35/63 (55%)
 Frame = -2

Query: 191 MAVLVLXXXXXXXXXXXXXCALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGK 12
           MAVLVL             CA +G N YV+S NGF GET FVKMK+   GS   WKK GK
Sbjct: 1   MAVLVLCSSTICSSSLSSCCAFSGTNVYVMSNNGFFGETPFVKMKSFPNGSSVIWKKHGK 60

Query: 11  SHL 3
             L
Sbjct: 61  RQL 63


>XP_003527773.1 PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Glycine max] KRH52317.1 hypothetical
           protein GLYMA_06G061000 [Glycine max]
          Length = 1113

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/63 (49%), Positives = 34/63 (53%)
 Frame = -2

Query: 191 MAVLVLXXXXXXXXXXXXXCALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGK 12
           MAVLVL             CA +G N YV+S NGF GET F KMK+   GS   WKK GK
Sbjct: 1   MAVLVLCSSTICSSSLSSCCAFSGTNVYVMSNNGFFGETPFFKMKSFPNGSSVIWKKHGK 60

Query: 11  SHL 3
             L
Sbjct: 61  RQL 63


>KOM42073.1 hypothetical protein LR48_Vigan04g227100 [Vigna angularis]
          Length = 1102

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 27/43 (62%), Positives = 28/43 (65%)
 Frame = -2

Query: 131 ALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGKSHL 3
           AL   N Y LS NGF G T FVKMK+L  GSL NWKK GK  L
Sbjct: 14  ALGDTNVYALSNNGFFGGTPFVKMKSLPNGSLVNWKKHGKRQL 56


>XP_017422433.1 PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vigna angularis] BAT78072.1 hypothetical
           protein VIGAN_02070900 [Vigna angularis var. angularis]
          Length = 1106

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 27/43 (62%), Positives = 28/43 (65%)
 Frame = -2

Query: 131 ALTGINFYVLSKNGFLGETNFVKMKTLSKGSLGNWKKRGKSHL 3
           AL   N Y LS NGF G T FVKMK+L  GSL NWKK GK  L
Sbjct: 14  ALGDTNVYALSNNGFFGGTPFVKMKSLPNGSLVNWKKHGKRQL 56


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