BLASTX nr result
ID: Glycyrrhiza28_contig00029353
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00029353
(430 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ... 66 3e-10
ABE80156.1 Ribonuclease H [Medicago truncatula] 61 4e-08
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum] 50 1e-07
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ... 54 4e-07
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran... 49 1e-06
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran... 50 2e-06
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum] 50 5e-06
ABN08572.1 RNA-directed DNA polymerase; Ribonuclease H, related ... 49 6e-06
GAU35447.1 hypothetical protein TSUD_364030 [Trifolium subterran... 52 9e-06
>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
Length = 284
Score = 66.2 bits (160), Expect = 3e-10
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Frame = -1
Query: 403 ISQSGACSRCGYGRN---------PSSMQLMTTQW*FCFGKH*DLLTTTGSSRNWL*DGL 251
+S S C+RC G P S ++ + G + WL +
Sbjct: 1 LSSSDICTRCSSGEETILHCLRDCPISRRIWNS-----LGFQNSSFFSCSDLELWLRNNS 55
Query: 250 SSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRERKEKHKPDR 71
F AGLW +W+ RN C+ + F +V E L A+ + CF R P R
Sbjct: 56 IGLNAPTFLAGLWWNWRARNIFCVGNASIHSFKVVAEVSKLVALIVFCFPARVHTDTPRR 115
Query: 70 WVTWH*SKEEITVLNVD 20
W++WH K + VLNVD
Sbjct: 116 WISWHPCKTDCVVLNVD 132
>ABE80156.1 Ribonuclease H [Medicago truncatula]
Length = 438
Score = 60.8 bits (146), Expect = 4e-08
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Frame = -1
Query: 415 HKRGISQSGACSRCG-----YGRNPSSMQLMTTQW*FCFGKH*DLLTTTGSSRNWL*DGL 251
H+R I+ S C+RCG + + W D T T S+ +W G+
Sbjct: 151 HRRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIWQKIGFTGNDFFTAT-SAHDWFKIGM 209
Query: 250 SSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRERKEKHKPDR 71
SSS +F GLW +W+ RN MC+ E ++F L + A F + + DR
Sbjct: 210 SSSLPDIFFGGLWWAWRHRNLMCLNNETMSLFRLCNNIVSAATYIKSAFDSEENVNHSDR 269
Query: 70 WVTWH*SKEEITVLNVD 20
+V W+ +LNVD
Sbjct: 270 FVKWNNRNHHDHILNVD 286
>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
Length = 386
Score = 50.1 bits (118), Expect(2) = 1e-07
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = -1
Query: 277 SRNWL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRE 98
S +WL +GLS S LF A +W W+TRN +C+ E FSL + + A + C
Sbjct: 205 SSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELVPQFSLKMRIVDYALLLKNCHFN 264
Query: 97 RKEKHKPDRWVTWH*SKEEITVLNVD 20
+ P + V W+ +LNVD
Sbjct: 265 YQVTTLP-KIVRWNALGGTSMILNVD 289
Score = 32.7 bits (73), Expect(2) = 1e-07
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 362 ESFLHAAHDYPMVILFWQALGFTDHYRFFSEL 267
E+ LH D V W++LGFTDH FF E+
Sbjct: 173 ETDLHCLRDCDFVYTIWKSLGFTDH-NFFQEV 203
>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 53.9 bits (128), Expect(2) = 4e-07
Identities = 29/83 (34%), Positives = 39/83 (46%)
Frame = -1
Query: 268 WL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRERKE 89
W GL SK LF AGLW W++RN C+++E + L CF +
Sbjct: 635 WCKSGLIGSKAILFAAGLWWIWRSRNARCMSEESMLLQRLAANITYFVDDINSCFFQPLP 694
Query: 88 KHKPDRWVTWH*SKEEITVLNVD 20
DR+V W+ S T+LNVD
Sbjct: 695 VMVSDRYVKWNNSNFNCTILNVD 717
Score = 27.3 bits (59), Expect(2) = 4e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 365 EESFLHAAHDYPMVILFWQALGFTDHYRF 279
+ES H D P + W +GF++ Y F
Sbjct: 599 DESVFHCIRDCPFSKIIWHHIGFSEPYFF 627
>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
Length = 440
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = -1
Query: 268 WL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRERKE 89
WL G S +F A LW W+ RN +C+A E + F++ + A + KC+ ++K
Sbjct: 208 WLRKGCDSPSMFMFLAALWWIWRARNKLCLANELVSPFTISRCIEDYALLVKKCYSQQKS 267
Query: 88 KHKPDRWVTWH*SKEEITVLNVD 20
+R V W+ +LNVD
Sbjct: 268 T-LANRLVRWNAHDGTDMILNVD 289
Score = 30.0 bits (66), Expect(2) = 1e-06
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 365 EESFLHAAHDYPMVILFWQALGFTDHYRFFSELAVGW 255
EE+ +H D V W+ +GFTD F + W
Sbjct: 172 EETIMHCLRDCEFVKHLWKTIGFTDQTFFHGDNLYAW 208
>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
Length = 968
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = -1
Query: 271 NWL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRERK 92
+WL G + ++ +F+AG+W SW+ RN M + E + L R++ F C
Sbjct: 733 DWLKMGATGTQSLIFSAGVWWSWRHRNLMSLNNETWTLSRLSFNIRSMVETFKNCCTPVS 792
Query: 91 EKHKPDRWVTWH*SKEEITVLNVD 20
DR++ W + T+LNVD
Sbjct: 793 NVGSVDRFIKWKNNNFSCTILNVD 816
Score = 28.1 bits (61), Expect(2) = 2e-06
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 371 LWEESFLHAAHDYPMVILFWQALGFTDHYRFFSELAV 261
L +ESFLH D W +GFT+ FFS + V
Sbjct: 696 LQDESFLHCIRDCDFSRSLWHHIGFTNP-NFFSNMDV 731
>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
Length = 724
Score = 50.4 bits (119), Expect(2) = 5e-06
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = -1
Query: 277 SRNWL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRE 98
S +WL +GLS S LF A +W W+TRN +C+ E FSL + + A + C
Sbjct: 489 SSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELIPQFSLKMRIVDYALLLKNCHFN 548
Query: 97 RKEKHKPDRWVTWH*SKEEITVLNVD 20
+ P + V W+ +LNVD
Sbjct: 549 HQVTTLP-KIVRWNALGGTSMILNVD 573
Score = 26.9 bits (58), Expect(2) = 5e-06
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 341 HDYPMVILFWQALGFTDHYRFFSEL 267
HD V W++LGFTD FF E+
Sbjct: 464 HDCNFVYTIWKSLGFTDR-NFFQEV 487
>ABN08572.1 RNA-directed DNA polymerase; Ribonuclease H, related [Medicago
truncatula]
Length = 121
Score = 49.3 bits (116), Expect(2) = 6e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = -1
Query: 271 NWL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRERK 92
+W+ + S +F AG W +WK RN +C+ + +FS+V EAR L+++ CF
Sbjct: 49 DWIKSHSNGSAANIFLAGFWWNWKARNIVCVGNDSIELFSVVSEARRLSSLLSVCF---P 105
Query: 91 EKHKPDRW 68
+H P+ +
Sbjct: 106 PQHAPESY 113
Score = 28.1 bits (61), Expect(2) = 6e-06
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 365 EESFLHAAHDYPMVILFWQALGFTDHYRFFSEL 267
EE LH D P + W+ LGF + FFS +
Sbjct: 14 EEFILHCIRDCPFAMNLWKTLGFI-NVNFFSNM 45
>GAU35447.1 hypothetical protein TSUD_364030 [Trifolium subterraneum]
Length = 526
Score = 52.4 bits (124), Expect(2) = 9e-06
Identities = 29/86 (33%), Positives = 43/86 (50%)
Frame = -1
Query: 277 SRNWL*DGLSSSKQALFTAGLWCSWKTRNGMCIAQE*ANVFSLVLEARNLAAIFLKCFRE 98
S +WL +GLS S LF A +W W+TRN +C+ E FSL + + A + C
Sbjct: 319 SSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELVPQFSLKMRIVDYALLLKNCHFN 378
Query: 97 RKEKHKPDRWVTWH*SKEEITVLNVD 20
+ P + V W+ + +LNVD
Sbjct: 379 HQVTTLP-KIVRWNALRGTSMILNVD 403
Score = 24.3 bits (51), Expect(2) = 9e-06
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 338 DYPMVILFWQALGFTDHYRFFSEL 267
D V W++LGFTD FF E+
Sbjct: 295 DCDFVYTIWKSLGFTDQ-NFFQEV 317