BLASTX nr result

ID: Glycyrrhiza28_contig00028988 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00028988
         (255 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU42562.1 hypothetical protein TSUD_240380 [Trifolium subterran...    55   9e-07
GAU46632.1 hypothetical protein TSUD_284800 [Trifolium subterran...    54   1e-06
XP_019163505.1 PREDICTED: uncharacterized protein LOC109159849 [...    54   1e-06
KYP67585.1 Putative ribonuclease H protein At1g65750 family [Caj...    54   2e-06
KYP37594.1 Putative ribonuclease H protein At1g65750 family, par...    53   3e-06
KYP45881.1 Putative ribonuclease H protein At1g65750 family [Caj...    52   6e-06

>GAU42562.1 hypothetical protein TSUD_240380 [Trifolium subterraneum]
          Length = 973

 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = -2

Query: 131  PEPSTQIRD--YIQWSPPPNGWVKLNCDGAVCNFGDSASVGGVFR 3
            P    QI+D  YI W  PP GW+KLNCDGA    G+S+  GG+FR
Sbjct: 902  PHVDLQIKDTIYIGWKKPPEGWIKLNCDGACKGGGESSGCGGLFR 946


>GAU46632.1 hypothetical protein TSUD_284800 [Trifolium subterraneum]
          Length = 925

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = -2

Query: 131 PEPSTQIRD--YIQWSPPPNGWVKLNCDGAVCNFGDSASVGGVFR 3
           P    QI+D  YI W  PP GW+KLNCDGA    G+S+  GG+FR
Sbjct: 740 PHIDLQIKDTIYIGWKKPPEGWIKLNCDGACKGGGESSGCGGLFR 784


>XP_019163505.1 PREDICTED: uncharacterized protein LOC109159849 [Ipomoea nil]
          Length = 1316

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 32/84 (38%), Positives = 46/84 (54%)
 Frame = -2

Query: 254  RAGNDLVFNQQRRNSHVLVCIIKNTVASIMKARELAYKTKTPEPSTQIRDYIQWSPPPNG 75
            +A N++ FN Q   S V   IIK   +   +A +     K P P++QI  ++ WSPP +G
Sbjct: 1102 KARNNVTFNNQITPSPV---IIKRACSEASEASQSLASRKGPLPASQI--WVHWSPPQSG 1156

Query: 74   WVKLNCDGAVCNFGDSASVGGVFR 3
            ++KLN DGA       AS GG+ R
Sbjct: 1157 FIKLNSDGARKALSGLASAGGILR 1180


>KYP67585.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 363

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = -2

Query: 254 RAGNDLVFNQQRRNSHVLVCIIKNTVASIMKARE--LAYKTK---TPEPSTQIRDYIQWS 90
           +A N L+F+Q   N + LV  IK     I +A +    + +K    P  S+ IR    W 
Sbjct: 96  KARNALIFDQHHVNPYCLVVSIKRRCLEISRASKECSTFSSKFLGDPYGSSPIR----WQ 151

Query: 89  PPPNGWVKLNCDGAVCNFGDSASVGGVFR 3
           PPP G +KLNCDGAV   G     GG+ R
Sbjct: 152 PPPLGSIKLNCDGAVRGVGRKVGCGGIIR 180


>KYP37594.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 522

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 34/84 (40%), Positives = 41/84 (48%)
 Frame = -2

Query: 254 RAGNDLVFNQQRRNSHVLVCIIKNTVASIMKARELAYKTKTPEPSTQIRDYIQWSPPPNG 75
           +A N  VFNQ   N + +VC IK     + K   +  K       T +   I WS PP G
Sbjct: 306 KARNMTVFNQLPFNPNQIVCEIKGRTGELTKVNSIGPKPTHYNIDTNL---ISWSRPPPG 362

Query: 74  WVKLNCDGAVCNFGDSASVGGVFR 3
            +KLNCDGAV      AS GGV R
Sbjct: 363 VLKLNCDGAVA-ASSIASCGGVIR 385


>KYP45881.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 194

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 32/78 (41%), Positives = 39/78 (50%)
 Frame = -2

Query: 236 VFNQQRRNSHVLVCIIKNTVASIMKARELAYKTKTPEPSTQIRDYIQWSPPPNGWVKLNC 57
           VFNQ   N + +VC IK     ++K   +  K       T +   I WS PP G +KLNC
Sbjct: 3   VFNQLPFNPNQIVCEIKGRTGELIKVNSIGPKPTHHNIDTNL---ISWSRPPPGVLKLNC 59

Query: 56  DGAVCNFGDSASVGGVFR 3
           DGAV      AS GGV R
Sbjct: 60  DGAVV-ASSIASCGGVIR 76


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