BLASTX nr result
ID: Glycyrrhiza28_contig00028224
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00028224
(320 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium] 109 2e-26
SCB50338.1 replication initiation protein RepC [Rhizobium multih... 100 1e-22
WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobia... 99 2e-22
WP_048758169.1 replication protein C [Afipia felis] 82 4e-16
CEG10456.1 replication initiation protein RepC [Afipia felis] 82 4e-16
KTT92375.1 replication protein C, partial [Staphylococcus sciuri] 77 3e-15
WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ... 78 1e-14
WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobi... 76 4e-14
WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III] 76 4e-14
EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis A... 76 4e-14
WP_013913430.1 replication protein C [Oligotropha carboxidovoran... 76 6e-14
ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5] 76 7e-14
WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR7945... 75 8e-14
WP_041358589.1 replication protein C [Methylobacterium extorquens] 74 2e-13
CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4] 74 2e-13
WP_054207043.1 replication initiation protein RepC [Bosea vavilo... 74 3e-13
SFJ74913.1 replication initiation protein RepC [Bosea sp. OK403] 74 4e-13
WP_068184787.1 hypothetical protein [Rhizobiales bacterium CCH3-A5] 69 7e-13
WP_069883214.1 replication initiation protein RepC [Bosea sp. BI... 73 8e-13
WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32... 72 1e-12
>WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium]
Length = 399
Score = 109 bits (273), Expect = 2e-26
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKKAT 169
GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKKAT
Sbjct: 344 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKKAT 399
>SCB50338.1 replication initiation protein RepC [Rhizobium multihospitium]
Length = 394
Score = 99.8 bits (247), Expect = 1e-22
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKKAT 169
GE QA+I+VAAILQRGVAIKNPGGYLRNLTRRA AG+FS+WPML+ALSA RLKKAT
Sbjct: 339 GEPQAAIIVAAILQRGVAIKNPGGYLRNLTRRAGAGQFSVWPMLMALSAARLKKAT 394
>WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae]
Length = 396
Score = 99.4 bits (246), Expect = 2e-22
Identities = 49/56 (87%), Positives = 54/56 (96%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKKAT 169
GE QA+IVV+AILQRGVAIKNPGGYLRNLTRRAAAG+FS+WPML+ALSA RLKKAT
Sbjct: 340 GETQAAIVVSAILQRGVAIKNPGGYLRNLTRRAAAGQFSMWPMLMALSAGRLKKAT 395
>WP_048758169.1 replication protein C [Afipia felis]
Length = 410
Score = 82.0 bits (201), Expect = 4e-16
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V+AAILQRG AIKNPGGYLRNL RRAAAG+FS+WPML+AL
Sbjct: 342 GDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGKFSVWPMLMAL 388
>CEG10456.1 replication initiation protein RepC [Afipia felis]
Length = 412
Score = 82.0 bits (201), Expect = 4e-16
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V+AAILQRG AIKNPGGYLRNL RRAAAG+FS+WPML+AL
Sbjct: 344 GDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGKFSVWPMLMAL 390
>KTT92375.1 replication protein C, partial [Staphylococcus sciuri]
Length = 226
Score = 77.4 bits (189), Expect = 3e-15
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALS 145
GE QAS +AAILQ+G AIKNPGGYLR LTRRA+AG+FSIWPML+AL+
Sbjct: 178 GEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALA 225
>WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ABE65103.1
replication protein C (plasmid) [Nitrobacter
hamburgensis X14]
Length = 541
Score = 78.2 bits (191), Expect = 1e-14
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V+AAILQRG AIK+PGGYLR L RRAAAGEFS+WPML+AL
Sbjct: 471 GDGQASVVLAAILQRGAAIKSPGGYLRVLARRAAAGEFSVWPMLMAL 517
>WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobiaceae] KIZ48201.1
replication protein C [Rhodopseudomonas palustris]
KQW18215.1 replication protein C [Afipia sp. Root123D2]
Length = 410
Score = 76.3 bits (186), Expect = 4e-14
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V++AILQRG AIKNPGGYLR L RRAAAG+FS+WPML+AL
Sbjct: 342 GDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWPMLMAL 388
>WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III]
Length = 412
Score = 76.3 bits (186), Expect = 4e-14
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V++AILQRG AIKNPGGYLR L RRAAAG+FS+WPML+AL
Sbjct: 344 GDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWPMLMAL 390
>EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis ATCC 53690]
Length = 412
Score = 76.3 bits (186), Expect = 4e-14
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V++AILQRG AIKNPGGYLR L RRAAAG+FS+WPML+AL
Sbjct: 344 GDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWPMLMAL 390
>WP_013913430.1 replication protein C [Oligotropha carboxidovorans] AEI04578.1
replication protein C (plasmid) [Oligotropha
carboxidovorans OM4] AEI08207.1 replication protein C
(plasmid) [Oligotropha carboxidovorans OM5]
Length = 410
Score = 75.9 bits (185), Expect = 6e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V+AAILQRG AIK+PGGYLR L RRA GEFS+WPMLLAL
Sbjct: 342 GDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGEFSVWPMLLAL 388
>ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5]
Length = 484
Score = 75.9 bits (185), Expect = 7e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V+AAILQRG AIK+PGGYLR L RRA GEFS+WPMLLAL
Sbjct: 416 GDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGEFSVWPMLLAL 462
>WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR79455.1 replication
protein C [Afipia sp. P52-10]
Length = 403
Score = 75.5 bits (184), Expect = 8e-14
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = +2
Query: 14 ASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKKA 166
AS+ +A ILQRG AI+NPGGYLR L RRA+AG+FS+WPML+AL AT+ +K+
Sbjct: 337 ASVTLALILQRGSAIRNPGGYLRTLARRASAGQFSVWPMLMALGATQRQKS 387
>WP_041358589.1 replication protein C [Methylobacterium extorquens]
Length = 412
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V++AILQRG AIK+PGGYLR L RRAAAG+FS+WPML+AL
Sbjct: 342 GDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGKFSVWPMLMAL 388
>CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4]
Length = 414
Score = 74.3 bits (181), Expect = 2e-13
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLAL 142
G+ QAS+V++AILQRG AIK+PGGYLR L RRAAAG+FS+WPML+AL
Sbjct: 344 GDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGKFSVWPMLMAL 390
>WP_054207043.1 replication initiation protein RepC [Bosea vaviloviae] KPH83185.1
replication initiation protein RepC [Bosea vaviloviae]
Length = 409
Score = 73.9 bits (180), Expect = 3e-13
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATR 154
GE+QASIVVAAILQRG AI + GGYLR LTRRA AGEFS+ PML+AL +R
Sbjct: 352 GEVQASIVVAAILQRGEAISSAGGYLRGLTRRAEAGEFSLGPMLMALIGSR 402
>SFJ74913.1 replication initiation protein RepC [Bosea sp. OK403]
Length = 409
Score = 73.6 bits (179), Expect = 4e-13
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKK 163
GE++ASIVVAAILQRG AI + GGYLR+LTRRA AGEFS+ PML+AL +R ++
Sbjct: 352 GEIEASIVVAAILQRGEAISSAGGYLRSLTRRAEAGEFSLGPMLMALIGSRKRE 405
>WP_068184787.1 hypothetical protein [Rhizobiales bacterium CCH3-A5]
Length = 106
Score = 68.6 bits (166), Expect = 7e-13
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2
Query: 5 EMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKK 163
E+QASIVVAAILQRG AI + GGYLR LTR+A A EFS+ PML+AL +R ++
Sbjct: 50 EVQASIVVAAILQRGEAISSAGGYLRELTRKAQAAEFSLGPMLMALIGSRRRE 102
>WP_069883214.1 replication initiation protein RepC [Bosea sp. BIWAKO-01]
GAU86913.1 plasmid replication protein RepC [Bosea sp.
BIWAKO-01]
Length = 409
Score = 72.8 bits (177), Expect = 8e-13
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLK 160
GE++ASIVVAAILQR AI + GGYLRNLTRRA AGEFS+ PML+AL +R +
Sbjct: 352 GEIEASIVVAAILQRAEAITSAGGYLRNLTRRAEAGEFSLGPMLMALIGSRTR 404
>WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32924.1 hypothetical
protein HMPREF9695_04939 [Afipia broomeae ATCC 49717]
Length = 410
Score = 72.4 bits (176), Expect = 1e-12
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +2
Query: 2 GEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSATRLKK 163
G+ AS+ +A ILQRG IKNPGGYLR L RRAAAG+FSIWPML+AL + K
Sbjct: 339 GQGPASVTLALILQRGNGIKNPGGYLRTLARRAAAGQFSIWPMLMALRGAQRGK 392