BLASTX nr result
ID: Glycyrrhiza28_contig00027549
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00027549
(337 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013449281.1 mediator of RNA polymerase II transcription subun... 160 1e-43
XP_003623670.1 mediator of RNA polymerase II transcription subun... 160 1e-43
GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterran... 156 4e-42
XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcri... 154 3e-41
KRH00533.1 hypothetical protein GLYMA_18G218900 [Glycine max] 143 2e-37
KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja] 143 2e-37
XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcri... 143 2e-37
XP_007140028.1 hypothetical protein PHAVU_008G078200g [Phaseolus... 142 4e-37
XP_014497735.1 PREDICTED: mediator of RNA polymerase II transcri... 140 1e-36
XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcri... 140 1e-36
KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan] 140 3e-36
XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcri... 139 5e-36
BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis ... 139 5e-36
XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcri... 130 6e-33
KHN29465.1 hypothetical protein glysoja_005189 [Glycine soja] 121 1e-30
XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcri... 121 8e-30
XP_002323105.2 hypothetical protein POPTR_0016s14910g [Populus t... 101 8e-23
XP_011006238.1 PREDICTED: mediator of RNA polymerase II transcri... 99 5e-22
XP_018818303.1 PREDICTED: mediator of RNA polymerase II transcri... 96 9e-21
XP_018818235.1 PREDICTED: mediator of RNA polymerase II transcri... 96 9e-21
>XP_013449281.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] KEH23308.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 992
Score = 160 bits (406), Expect = 1e-43
Identities = 84/111 (75%), Positives = 88/111 (79%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
EG IAVGGLEYLLSLHNN VMSSQDK K NQ A FKPVYIDSFPKLRALYCQYKSC
Sbjct: 396 EGGIAVGGLEYLLSLHNNCVMSSQDKQKSNQNLFDSASFKPVYIDSFPKLRALYCQYKSC 455
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQTA++ILSMIYQKMSKGGI AC++L
Sbjct: 456 VASTLSGISTGNSIHQTASVILSMIYQKMSKGGISSSNSSSPNSSNACSAL 506
>XP_003623670.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] AES79888.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 1320
Score = 160 bits (406), Expect = 1e-43
Identities = 84/111 (75%), Positives = 88/111 (79%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
EG IAVGGLEYLLSLHNN VMSSQDK K NQ A FKPVYIDSFPKLRALYCQYKSC
Sbjct: 724 EGGIAVGGLEYLLSLHNNCVMSSQDKQKSNQNLFDSASFKPVYIDSFPKLRALYCQYKSC 783
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQTA++ILSMIYQKMSKGGI AC++L
Sbjct: 784 VASTLSGISTGNSIHQTASVILSMIYQKMSKGGISSSNSSSPNSSNACSAL 834
>GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterraneum]
Length = 1247
Score = 156 bits (395), Expect = 4e-42
Identities = 83/111 (74%), Positives = 90/111 (81%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
EG IAVGGLEYLLSLHNN VMSSQDKLK + K +L + FKPV+IDSFPKLRALYCQYKSC
Sbjct: 652 EGGIAVGGLEYLLSLHNNRVMSSQDKLK-STKNLLDSAFKPVHIDSFPKLRALYCQYKSC 710
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSI QTA++ILSMIYQKMSKGGI AC+SL
Sbjct: 711 VASTLSGISTGNSIPQTASVILSMIYQKMSKGGISSSNCSSPNSSNACSSL 761
>XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cicer arietinum]
Length = 1318
Score = 154 bits (389), Expect = 3e-41
Identities = 81/95 (85%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
EG IAVGGLEYLLSLHNN VMSSQDKLK NQ A FKPVYIDSFPKLRALYCQYKSC
Sbjct: 722 EGGIAVGGLEYLLSLHNNWVMSSQDKLKNNQNLFDSASFKPVYIDSFPKLRALYCQYKSC 781
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQK-MSKGGI 283
VAS LSGISTGNSIHQTA++ILSMIYQK M+KGGI
Sbjct: 782 VASTLSGISTGNSIHQTASVILSMIYQKMMTKGGI 816
>KRH00533.1 hypothetical protein GLYMA_18G218900 [Glycine max]
Length = 966
Score = 143 bits (360), Expect = 2e-37
Identities = 73/94 (77%), Positives = 78/94 (82%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHNN M SQDKLK N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 734 ELGVAVGGLEYILSLHNNRAMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQYKSC 793
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGI 283
VAS LSGISTGNSIHQTA +ILSMIYQK++KGGI
Sbjct: 794 VASALSGISTGNSIHQTANMILSMIYQKITKGGI 827
>KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja]
Length = 1332
Score = 143 bits (360), Expect = 2e-37
Identities = 73/94 (77%), Positives = 78/94 (82%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHNN M SQDKLK N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 734 ELGVAVGGLEYILSLHNNRAMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQYKSC 793
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGI 283
VAS LSGISTGNSIHQTA +ILSMIYQK++KGGI
Sbjct: 794 VASALSGISTGNSIHQTANMILSMIYQKITKGGI 827
>XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Glycine max] KRH00532.1 hypothetical protein
GLYMA_18G218900 [Glycine max]
Length = 1332
Score = 143 bits (360), Expect = 2e-37
Identities = 73/94 (77%), Positives = 78/94 (82%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHNN M SQDKLK N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 734 ELGVAVGGLEYILSLHNNRAMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQYKSC 793
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGI 283
VAS LSGISTGNSIHQTA +ILSMIYQK++KGGI
Sbjct: 794 VASALSGISTGNSIHQTANMILSMIYQKITKGGI 827
>XP_007140028.1 hypothetical protein PHAVU_008G078200g [Phaseolus vulgaris]
ESW12022.1 hypothetical protein PHAVU_008G078200g
[Phaseolus vulgaris]
Length = 960
Score = 142 bits (358), Expect = 4e-37
Identities = 76/111 (68%), Positives = 83/111 (74%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY++SLHNN VM SQDK K N E A KPVYIDSFPKLRALYCQYKSC
Sbjct: 732 ELGVAVGGLEYIISLHNNRVMYSQDKRKSNPNES--ASVKPVYIDSFPKLRALYCQYKSC 789
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQTA +ILSMIYQK++K GI AC+SL
Sbjct: 790 VASALSGISTGNSIHQTANMILSMIYQKITKVGISSSNSSSPTSSNACSSL 840
>XP_014497735.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Vigna radiata var. radiata]
Length = 1043
Score = 140 bits (354), Expect = 1e-36
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHN+ VM SQDK K N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 730 ELGVAVGGLEYILSLHNHRVMYSQDKRKSNPNLPESASVKPVYIDSFPKLRALYCQYKSC 789
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQTA +ILSMIYQK++K GI AC+SL
Sbjct: 790 VASALSGISTGNSIHQTANMILSMIYQKITKVGISSSNSSSPTSSNACSSL 840
>XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Vigna radiata var. radiata]
Length = 1326
Score = 140 bits (354), Expect = 1e-36
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHN+ VM SQDK K N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 730 ELGVAVGGLEYILSLHNHRVMYSQDKRKSNPNLPESASVKPVYIDSFPKLRALYCQYKSC 789
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQTA +ILSMIYQK++K GI AC+SL
Sbjct: 790 VASALSGISTGNSIHQTANMILSMIYQKITKVGISSSNSSSPTSSNACSSL 840
>KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan]
Length = 1233
Score = 140 bits (352), Expect = 3e-36
Identities = 74/111 (66%), Positives = 83/111 (74%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E ++VGGLEY+LSL+NN VM SQDK+K N A KPVYIDSFPKLRALYCQYKS
Sbjct: 711 ELGVSVGGLEYILSLYNNRVMFSQDKMKSNPSLSESASVKPVYIDSFPKLRALYCQYKSG 770
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQTA +ILSMIYQK++KGGI AC+SL
Sbjct: 771 VASALSGISTGNSIHQTANMILSMIYQKITKGGISSSNSSSPTSSNACSSL 821
>XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Vigna angularis]
Length = 1331
Score = 139 bits (350), Expect = 5e-36
Identities = 74/111 (66%), Positives = 81/111 (72%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHN+ VM SQDK K N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 730 ELGVAVGGLEYILSLHNHRVMYSQDKRKSNPNLPESASVKPVYIDSFPKLRALYCQYKSC 789
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQT +ILSMIYQK++K GI AC+SL
Sbjct: 790 VASALSGISTGNSIHQTGNMILSMIYQKITKVGISSSNSSSPTSSNACSSL 840
>BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis var. angularis]
Length = 1331
Score = 139 bits (350), Expect = 5e-36
Identities = 74/111 (66%), Positives = 81/111 (72%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
E +AVGGLEY+LSLHN+ VM SQDK K N A KPVYIDSFPKLRALYCQYKSC
Sbjct: 730 ELGVAVGGLEYILSLHNHRVMYSQDKRKSNPNLPESASVKPVYIDSFPKLRALYCQYKSC 789
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTSL 334
VAS LSGISTGNSIHQT +ILSMIYQK++K GI AC+SL
Sbjct: 790 VASALSGISTGNSIHQTGNMILSMIYQKITKVGISSSNSSSPTSSNACSSL 840
>XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis ipaensis]
Length = 1326
Score = 130 bits (327), Expect = 6e-33
Identities = 67/94 (71%), Positives = 77/94 (81%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
+G A+GGLEYLLSLHNN ++SSQ+KLK N + A KPVYIDSFPKLRA YCQ KSC
Sbjct: 735 DGRGAIGGLEYLLSLHNNCIISSQEKLKINTSDS--ASVKPVYIDSFPKLRAWYCQQKSC 792
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGI 283
VAS LSG+STGNSIHQ A +ILSMIYQ++SKG I
Sbjct: 793 VASSLSGLSTGNSIHQVANLILSMIYQRISKGVI 826
>KHN29465.1 hypothetical protein glysoja_005189 [Glycine soja]
Length = 423
Score = 121 bits (304), Expect = 1e-30
Identities = 64/87 (73%), Positives = 69/87 (79%)
Frame = +2
Query: 20 GGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSCVASPLS 199
GGLEY+LSLHN VM SQDKLK N A KPVYIDSFPKLRALYCQ+KSCVAS LS
Sbjct: 37 GGLEYILSLHNTRVMFSQDKLKSNPSLSDSASVKPVYIDSFPKLRALYCQHKSCVASALS 96
Query: 200 GISTGNSIHQTATIILSMIYQKMSKGG 280
GISTGNSIHQTA +MIYQK++K G
Sbjct: 97 GISTGNSIHQTA----NMIYQKITKAG 119
>XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis duranensis]
Length = 1324
Score = 121 bits (304), Expect = 8e-30
Identities = 64/94 (68%), Positives = 75/94 (79%)
Frame = +2
Query: 2 EGAIAVGGLEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQYKSC 181
+G A+GGLEYLLSLHNN ++SSQ+KLK N + + KPVYIDSFPKLRA YCQ KSC
Sbjct: 735 DGRGAIGGLEYLLSLHNNCIISSQEKLKSNTSDSVSV--KPVYIDSFPKLRAWYCQQKSC 792
Query: 182 VASPLSGISTGNSIHQTATIILSMIYQKMSKGGI 283
VAS LSG+STGN HQ A +ILSMIYQ++SKG I
Sbjct: 793 VASSLSGLSTGN--HQVANLILSMIYQRISKGVI 824
>XP_002323105.2 hypothetical protein POPTR_0016s14910g [Populus trichocarpa]
EEF04866.2 hypothetical protein POPTR_0016s14910g
[Populus trichocarpa]
Length = 1346
Score = 101 bits (252), Expect = 8e-23
Identities = 54/99 (54%), Positives = 69/99 (69%), Gaps = 7/99 (7%)
Frame = +2
Query: 5 GAIAVGG---LEYLLSLHN----NHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALY 163
G A+GG LEYLL L N +H S+QD++ NQ + + KP Y+D +PKLRA Y
Sbjct: 756 GGGAIGGELTLEYLLLLRNGRIASHNYSAQDEINSNQVQHEYSSDKPEYVDFYPKLRAWY 815
Query: 164 CQYKSCVASPLSGISTGNSIHQTATIILSMIYQKMSKGG 280
CQ KSC+ASPLSGISTGN +H+ A IL+MIY+KM+K G
Sbjct: 816 CQNKSCIASPLSGISTGNPVHEVANKILNMIYRKMTKSG 854
>XP_011006238.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Populus euphratica]
Length = 1348
Score = 99.4 bits (246), Expect = 5e-22
Identities = 53/99 (53%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
Frame = +2
Query: 5 GAIAVGG---LEYLLSLHN----NHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALY 163
G A+GG L+YLL L N +H S QD++ NQ + + KP Y+D +PKLRA Y
Sbjct: 754 GGGAIGGELTLQYLLLLRNGRIASHNYSVQDEINSNQVQHEYSSDKPEYVDFYPKLRAWY 813
Query: 164 CQYKSCVASPLSGISTGNSIHQTATIILSMIYQKMSKGG 280
CQ KSC+ASPLSGISTGN +H+ A IL+MIY+KM+K G
Sbjct: 814 CQNKSCIASPLSGISTGNPVHEVANKILNMIYRKMTKSG 852
>XP_018818303.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X5 [Juglans regia]
Length = 1085
Score = 95.9 bits (237), Expect = 9e-21
Identities = 54/113 (47%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 EGAIAVGG---LEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQY 172
E +AV G LEYLL L N + S Q + N + A KP+YIDS+PKLRA YCQ
Sbjct: 494 ERGVAVRGELTLEYLLLLRNRSIASCQVETYSNPNQSEPASGKPIYIDSYPKLRAWYCQN 553
Query: 173 KSCVASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTS 331
KSC+AS L+G+S+GN +HQ A ILSMIY KM+K AC S
Sbjct: 554 KSCIASTLAGLSSGNPVHQVANKILSMIYWKMTKSAASSGNSSTPTSGSACES 606
>XP_018818235.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X4 [Juglans regia]
Length = 1089
Score = 95.9 bits (237), Expect = 9e-21
Identities = 54/113 (47%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 EGAIAVGG---LEYLLSLHNNHVMSSQDKLKCNQKEILIAFFKPVYIDSFPKLRALYCQY 172
E +AV G LEYLL L N + S Q + N + A KP+YIDS+PKLRA YCQ
Sbjct: 498 ERGVAVRGELTLEYLLLLRNRSIASCQVETYSNPNQSEPASGKPIYIDSYPKLRAWYCQN 557
Query: 173 KSCVASPLSGISTGNSIHQTATIILSMIYQKMSKGGIXXXXXXXXXXXXACTS 331
KSC+AS L+G+S+GN +HQ A ILSMIY KM+K AC S
Sbjct: 558 KSCIASTLAGLSSGNPVHQVANKILSMIYWKMTKSAASSGNSSTPTSGSACES 610