BLASTX nr result

ID: Glycyrrhiza28_contig00027548 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00027548
         (258 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003548483.1 PREDICTED: pentatricopeptide repeat-containing pr...    66   8e-11
KHN46372.1 Pentatricopeptide repeat-containing protein, chloropl...    63   1e-09
XP_003553320.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   1e-09
BAT84879.1 hypothetical protein VIGAN_04234600 [Vigna angularis ...    57   1e-07
XP_017417325.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
XP_014491031.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
KYP34852.1 hypothetical protein KK1_044145 [Cajanus cajan]             55   7e-07
XP_007161786.1 hypothetical protein PHAVU_001G097900g [Phaseolus...    55   9e-07
XP_016162112.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   2e-06
XP_015971100.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   6e-06

>XP_003548483.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic [Glycine max] KHN46817.1 Pentatricopeptide
           repeat-containing protein, chloroplastic [Glycine soja]
           KRH06772.1 hypothetical protein GLYMA_16G044700 [Glycine
           max]
          Length = 483

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACC+PDIIN   P   T +TRF SE ALV LQKCSNF  LKQVH
Sbjct: 1   MKVACCSPDIIN--APYLGTPRTRFGSEEALVLLQKCSNFKQLKQVH 45


>KHN46372.1 Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 474

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACCTPDI     P  +T +TRF SE ALV L+KCSNF  LKQVH
Sbjct: 1   MKVACCTPDI---NVPYLETPRTRFGSEEALVLLKKCSNFKQLKQVH 44


>XP_003553320.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max] KRG94753.1 hypothetical
           protein GLYMA_19G107000 [Glycine max]
          Length = 474

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACCTPDI     P  +T +TRF SE ALV L+KCSNF  LKQVH
Sbjct: 1   MKVACCTPDI---NVPYLETPRTRFGSEEALVLLKKCSNFKQLKQVH 44


>BAT84879.1 hypothetical protein VIGAN_04234600 [Vigna angularis var.
           angularis]
          Length = 439

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACC+P+I     P   T +TRF SE A V LQKCSNF  LKQVH
Sbjct: 1   MKVACCSPEI---NVPYLGTPRTRFGSEEAHVILQKCSNFKQLKQVH 44


>XP_017417325.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Vigna angularis] KOM38492.1
           hypothetical protein LR48_Vigan03g187400 [Vigna
           angularis]
          Length = 467

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACC+P+I     P   T +TRF SE A V LQKCSNF  LKQVH
Sbjct: 1   MKVACCSPEI---NVPYLGTPRTRFGSEEAHVILQKCSNFKQLKQVH 44


>XP_014491031.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic [Vigna radiata var. radiata]
          Length = 467

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACC+P+I     P   T +TRF SE A V LQKCSNF  LKQVH
Sbjct: 1   MKVACCSPEI---KVPYLGTPRTRFGSEEAHVILQKCSNFKQLKQVH 44


>KYP34852.1 hypothetical protein KK1_044145 [Cajanus cajan]
          Length = 450

 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 27/47 (57%), Positives = 31/47 (65%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           M+V CC+PDI     P   T  TRF S+ AL FLQKC+NF  LKQVH
Sbjct: 1   MRVTCCSPDI---NVPYLGTPGTRFGSQEALFFLQKCNNFKKLKQVH 44


>XP_007161786.1 hypothetical protein PHAVU_001G097900g [Phaseolus vulgaris]
           ESW33780.1 hypothetical protein PHAVU_001G097900g
           [Phaseolus vulgaris]
          Length = 482

 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 MKVACCTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVACC+P++     P   T +TRF SE A + LQKCSNF  LKQVH
Sbjct: 1   MKVACCSPEL---NVPCLGTPRTRFGSEEAHLILQKCSNFKQLKQVH 44


>XP_016162112.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Arachis ipaensis]
          Length = 472

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 MKVAC-CTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVAC CTPDI       F T + +F S+ AL +LQ+CSNF HLKQVH
Sbjct: 1   MKVACFCTPDI---NYVYFGTQRPKFGSKEALFYLQRCSNFKHLKQVH 45


>XP_015971100.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Arachis duranensis]
          Length = 472

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 MKVAC-CTPDIINNTPPQFKTSKTRFNSEVALVFLQKCSNFNHLKQVH 256
           MKVAC CTPDI       F T + +F S+ AL +LQ+CSNF HL+QVH
Sbjct: 1   MKVACFCTPDI---NYVYFGTQRPKFGSKEALFYLQRCSNFKHLRQVH 45


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