BLASTX nr result
ID: Glycyrrhiza28_contig00027343
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00027343
(295 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_051396544.1 integrase [Bradyrhizobium elkanii] 62 4e-09
WP_054308957.1 integrase [Mesorhizobium sp. 1M-11] 60 2e-08
WP_059189016.1 integrase [Mesorhizobium loti] KUM24139.1 integra... 60 2e-08
WP_052459364.1 integrase [Mesorhizobium sp. ORS3324] CDX22486.1 ... 60 2e-08
WP_037241696.1 integrase [Rhodomicrobium udaipurense] 59 3e-08
KAI93429.1 integrase [Rhodomicrobium udaipurense JA643] 59 4e-08
WP_036586000.1 integrase [Ochrobactrum anthropi] EXL07394.1 inte... 59 6e-08
WP_023808491.1 integrase [Mesorhizobium sp. L2C084A000] ESZ29727... 59 6e-08
WP_051333820.1 integrase [Mesorhizobium sp. WSM3224] 58 1e-07
WP_027164793.1 integrase [Mesorhizobium sp. WSM3224] 57 2e-07
AHY49215.1 putative phage integrase [Bradyrhizobium japonicum SE... 57 2e-07
WP_063985008.1 hypothetical protein [Bradyrhizobium sp. G22] 54 2e-07
WP_071910687.1 hypothetical protein [Bradyrhizobium japonicum] A... 54 2e-07
WP_048463710.1 integrase [Methylobacterium aquaticum] KMO36208.1... 57 2e-07
BAR59601.1 site-specific integrase/recombinase [Bradyrhizobium d... 57 2e-07
WP_025089730.1 integrase [Ochrobactrum intermedium] 57 2e-07
WP_006470824.1 MULTISPECIES: integrase [Ochrobactrum] ELT50234.1... 57 2e-07
WP_008839435.1 integrase [Mesorhizobium alhagi] EHK53624.1 Phage... 57 2e-07
WP_063898252.1 integrase [Mesorhizobium loti] 57 2e-07
WP_049832706.1 hypothetical protein [Methylobacterium extorquens] 54 2e-07
>WP_051396544.1 integrase [Bradyrhizobium elkanii]
Length = 406
Score = 62.0 bits (149), Expect = 4e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRNPVNKAGQDRSKSTK 170
W AG+LGMSVE L +VYGHHHPD+ D K++ + + R+ + Q RS+ TK
Sbjct: 343 WQGAGYLGMSVETLLKVYGHHHPDYLSDAVEKMTAKPKRRSTATASPQKRSEQTK 397
>WP_054308957.1 integrase [Mesorhizobium sp. 1M-11]
Length = 415
Score = 60.1 bits (144), Expect = 2e-08
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDR 125
+WAAAGFLGM+V+VL YGHHHPDFQ D A ++ + R R
Sbjct: 362 VWAAAGFLGMTVDVLIETYGHHHPDFQADAADAITSKARTR 402
>WP_059189016.1 integrase [Mesorhizobium loti] KUM24139.1 integrase [Mesorhizobium
loti]
Length = 436
Score = 60.1 bits (144), Expect = 2e-08
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRN----PVNKAG---QDRSKS 164
WAAAGFLGM+VE+L + YGHHHPDFQ D A + + R R+ V AG DRS+
Sbjct: 367 WAAAGFLGMTVEMLIQTYGHHHPDFQADAAEAIVSKARARSLPKYVVRMAGGTEGDRSRH 426
Query: 165 TKIVDFTRRA 194
+ ++ +R+A
Sbjct: 427 SPQLNRSRQA 436
>WP_052459364.1 integrase [Mesorhizobium sp. ORS3324] CDX22486.1 Phage integrase
[Mesorhizobium sp. ORS3324]
Length = 433
Score = 59.7 bits (143), Expect = 2e-08
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRNPVNKAGQ 149
WAAAGFLGM++E+L + YG+HHPDFQ D A + + R RN + G+
Sbjct: 367 WAAAGFLGMTIEMLIQTYGYHHPDFQADAAEAIVSKARPRNHLKIVGR 414
>WP_037241696.1 integrase [Rhodomicrobium udaipurense]
Length = 284
Score = 58.9 bits (141), Expect = 3e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVA 95
W AAG+LGM+VE LERVYGHHHPDFQQ+ A
Sbjct: 248 WEAAGYLGMTVETLERVYGHHHPDFQQNAA 277
>KAI93429.1 integrase [Rhodomicrobium udaipurense JA643]
Length = 355
Score = 58.9 bits (141), Expect = 4e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVA 95
W AAG+LGM+VE LERVYGHHHPDFQQ+ A
Sbjct: 319 WEAAGYLGMTVETLERVYGHHHPDFQQNAA 348
>WP_036586000.1 integrase [Ochrobactrum anthropi] EXL07394.1 integrase
[Ochrobactrum anthropi]
Length = 427
Score = 58.5 bits (140), Expect = 6e-08
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 12/67 (17%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQD----RDRNPV--------NKAG 146
+W +AGFLGM+VE L + YGHHHPDFQ D A K++ + R +N V NKAG
Sbjct: 350 VWQSAGFLGMTVETLVQTYGHHHPDFQIDAAEKITAKHGAARRPKNVVSINDAQTGNKAG 409
Query: 147 QDRSKST 167
S T
Sbjct: 410 SPHSFPT 416
>WP_023808491.1 integrase [Mesorhizobium sp. L2C084A000] ESZ29727.1 integrase
[Mesorhizobium sp. L2C084A000]
Length = 445
Score = 58.5 bits (140), Expect = 6e-08
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRN-PVNKAGQDRSKST 167
WAAAGFLGM+VE+L + YGHHHPDFQ + A + + R R+ P N +++T
Sbjct: 367 WAAAGFLGMTVEMLIQTYGHHHPDFQAEAAEAIVSKSRYRSLPKNVVRMPEAQTT 421
>WP_051333820.1 integrase [Mesorhizobium sp. WSM3224]
Length = 437
Score = 57.8 bits (138), Expect = 1e-07
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRN 128
WAAAGFLGM+VE+L YGHHHPDFQ + R + + R N
Sbjct: 368 WAAAGFLGMTVEMLIETYGHHHPDFQTEAIRAIVSKSRSPN 408
>WP_027164793.1 integrase [Mesorhizobium sp. WSM3224]
Length = 440
Score = 57.4 bits (137), Expect = 2e-07
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDR 119
WAAAGFLGM+VE+L + YGHHHPDFQ D A + + R
Sbjct: 367 WAAAGFLGMTVEMLIQTYGHHHPDFQADAAEAIVSKAR 404
>AHY49215.1 putative phage integrase [Bradyrhizobium japonicum SEMIA 5079]
Length = 509
Score = 57.4 bits (137), Expect = 2e-07
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDR---DRNPVNKAGQDRSKSTKI 173
IW AAGFLGMS EVL+ YGHHHPDF Q A + + R V +DR++ K
Sbjct: 426 IWEAAGFLGMSPEVLQDTYGHHHPDFLQGAAAAIGQKSRYVSVAETVVNLTEDRNQKKKP 485
Query: 174 VDFTRRAQ*NGAFGTQGSQVRILPLRPD 257
DF Q S +R PLRP+
Sbjct: 486 NDFWSE--------WQDSNLR--PLRPE 503
>WP_063985008.1 hypothetical protein [Bradyrhizobium sp. G22]
Length = 89
Score = 53.9 bits (128), Expect = 2e-07
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDR 119
W AAG+LGMS+EVL YGHHHPD+ D K++ ++R
Sbjct: 32 WQAAGYLGMSLEVLLNTYGHHHPDYLADAVEKIAKRER 69
>WP_071910687.1 hypothetical protein [Bradyrhizobium japonicum] APG09530.1
integrase [Bradyrhizobium japonicum]
Length = 75
Score = 53.5 bits (127), Expect = 2e-07
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDR 119
W AAG+LGMS++VL YGHHHPD+ D +K++ ++R
Sbjct: 31 WQAAGYLGMSLDVLLNTYGHHHPDYLADAVKKIAKRER 68
>WP_048463710.1 integrase [Methylobacterium aquaticum] KMO36208.1 integrase
[Methylobacterium aquaticum]
Length = 425
Score = 57.0 bits (136), Expect = 2e-07
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRNPVNKAGQDRSKSTKIVD- 179
+W AA +LGM+V++LERVYGHH PDFQ+ A ++KAG+ +++ I D
Sbjct: 370 LWQAAAYLGMTVQMLERVYGHHRPDFQEAAA----------GALDKAGRRATETLDIEDA 419
Query: 180 FTRRA 194
FTRRA
Sbjct: 420 FTRRA 424
>BAR59601.1 site-specific integrase/recombinase [Bradyrhizobium diazoefficiens]
Length = 426
Score = 57.0 bits (136), Expect = 2e-07
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDR---DRNPVNKAGQDRSKSTKI 173
IW AAGFLGMS EVL+ YGHHHPDF Q A + + R V +DR++ K
Sbjct: 343 IWEAAGFLGMSPEVLQDTYGHHHPDFLQGAATAIGQKGRYVSVAETVVNLTEDRNQKKKP 402
Query: 174 VDFTRRAQ*NGAFGTQGSQVRILPLRPD 257
DF Q S +R PLRP+
Sbjct: 403 NDFWSE--------WQDSNLR--PLRPE 420
>WP_025089730.1 integrase [Ochrobactrum intermedium]
Length = 427
Score = 57.0 bits (136), Expect = 2e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQ 113
+W +AGFLGM+VE L + YGHHHPDFQ D A K++ +
Sbjct: 350 VWQSAGFLGMTVETLVQTYGHHHPDFQIDAAEKITAK 386
>WP_006470824.1 MULTISPECIES: integrase [Ochrobactrum] ELT50234.1 Phage integrase
[Ochrobactrum intermedium M86] KIU68396.1 integrase
[Ochrobactrum anthropi]
Length = 427
Score = 57.0 bits (136), Expect = 2e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQ 113
+W +AGFLGM+VE L + YGHHHPDFQ D A K++ +
Sbjct: 350 VWQSAGFLGMTVETLVQTYGHHHPDFQIDAAEKITAK 386
>WP_008839435.1 integrase [Mesorhizobium alhagi] EHK53624.1 Phage integrase
[Mesorhizobium alhagi CCNWXJ12-2]
Length = 427
Score = 57.0 bits (136), Expect = 2e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQ 113
+W AAGFLGM+ E L YGHHHPDFQ D A K++ +
Sbjct: 349 VWEAAGFLGMTTETLIETYGHHHPDFQSDAAEKITSK 385
>WP_063898252.1 integrase [Mesorhizobium loti]
Length = 435
Score = 57.0 bits (136), Expect = 2e-07
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 6 WAAAGFLGMSVEVLERVYGHHHPDFQQDVARKVSGQDRDRN 128
W AAGFLGM+VE+L YGHHHPDFQ + R + + R RN
Sbjct: 366 WEAAGFLGMTVEMLIETYGHHHPDFQAEATRAIVSKPRLRN 406
>WP_049832706.1 hypothetical protein [Methylobacterium extorquens]
Length = 98
Score = 53.9 bits (128), Expect = 2e-07
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +3
Query: 3 IWAAAGFLGMSVEVLERVYGHHHPDFQQDVA 95
+W AAG+LGM+ E+L++VYGHHHPDFQ + A
Sbjct: 41 LWEAAGYLGMTPEMLQKVYGHHHPDFQNEAA 71