BLASTX nr result
ID: Glycyrrhiza28_contig00027187
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00027187
(320 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP50278.1 Retrovirus-related Pol polyprotein from transposon TN... 171 3e-52
KYP62895.1 Retrovirus-related Pol polyprotein from transposon TN... 169 2e-50
KYP72045.1 Retrovirus-related Pol polyprotein from transposon TN... 164 1e-49
CAN81839.1 hypothetical protein VITISV_033739 [Vitis vinifera] 176 3e-49
KYP43087.1 Retrovirus-related Pol polyprotein from transposon TN... 172 3e-49
JAU39535.1 Retrovirus-related Pol polyprotein from transposon TN... 170 4e-49
JAU33129.1 Retrovirus-related Pol polyprotein from transposon TN... 174 2e-48
AFP55578.1 copia-type polyprotein [Rosa rugosa] 173 5e-48
JAU33683.1 Retrovirus-related Pol polyprotein from transposon TN... 172 9e-48
JAU10377.1 Retrovirus-related Pol polyprotein from transposon TN... 161 3e-47
JAU09122.1 Retrovirus-related Pol polyprotein from transposon TN... 163 4e-47
GAU30145.1 hypothetical protein TSUD_310960 [Trifolium subterran... 165 4e-47
KYP35468.1 Retrovirus-related Pol polyprotein from transposon TN... 165 1e-46
KYP74877.1 Retrovirus-related Pol polyprotein from transposon TN... 169 1e-46
CAN65188.1 hypothetical protein VITISV_004365 [Vitis vinifera] 169 1e-46
CBI37296.3 unnamed protein product, partial [Vitis vinifera] 169 1e-46
CAN74442.1 hypothetical protein VITISV_031467 [Vitis vinifera] 167 2e-46
KYP51066.1 Retrovirus-related Pol polyprotein from transposon TN... 162 2e-46
KOM33859.1 hypothetical protein LR48_Vigan02g000900 [Vigna angul... 168 2e-46
KYP44457.1 Retrovirus-related Pol polyprotein from transposon TN... 167 2e-46
>KYP50278.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 180
Score = 171 bits (432), Expect = 3e-52
Identities = 76/106 (71%), Positives = 90/106 (84%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS+EFNEFC+ GI RQLTT+YTPQQNGVAERKN TIMN+VR +L +KK+PK+FWPE
Sbjct: 11 GEFTSSEFNEFCQKTGIKRQLTTAYTPQQNGVAERKNRTIMNLVRTLLSEKKLPKSFWPE 70
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A W VLNRSPTL VK++ PEE WSG+KP V++FRVFGC+ HVH
Sbjct: 71 AVNWVAYVLNRSPTLAVKNQMPEEAWSGVKPSVEHFRVFGCVTHVH 116
>KYP62895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 281
Score = 169 bits (429), Expect = 2e-50
Identities = 76/106 (71%), Positives = 87/106 (82%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEF S EFN+FCK GI RQLTT+Y PQQNGV +RKN T+MNMVRCML +KKVPK FWP+
Sbjct: 154 GEFVSLEFNDFCKEQGIKRQLTTAYMPQQNGVVKRKNRTVMNMVRCMLSEKKVPKIFWPK 213
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A WT VLNRSPTL VK+ TPEE WSG KP V++FR+FGC+AHVH
Sbjct: 214 AVNWTTYVLNRSPTLAVKNVTPEEAWSGSKPSVEHFRIFGCMAHVH 259
>KYP72045.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 199
Score = 164 bits (416), Expect = 1e-49
Identities = 74/106 (69%), Positives = 86/106 (81%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EF +FCK GISRQLTT+YTPQQNGV ER+N T+MN VR L D++VPKAFWPE
Sbjct: 71 GEFTSTEFEDFCKDQGISRQLTTAYTPQQNGVPERRNKTLMNAVRATLNDRQVPKAFWPE 130
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A +W V V NRSPT ++ KTPEE WSG KP+VD+FRVFGC+AH H
Sbjct: 131 AVRWCVHVQNRSPTSAIEQKTPEEAWSGDKPRVDHFRVFGCIAHAH 176
>CAN81839.1 hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 176 bits (447), Expect = 3e-49
Identities = 80/106 (75%), Positives = 89/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTSNEF FC NGI RQLT +YTPQQNGVAERKN TIMNMVR ML +K++PK FWPE
Sbjct: 319 GEFTSNEFTSFCNENGILRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQIPKTFWPE 378
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A WTV VLNRSPTL VK+KTPEE WSG KP VD+FR+FGC++HVH
Sbjct: 379 AVNWTVHVLNRSPTLAVKNKTPEEAWSGRKPSVDHFRIFGCISHVH 424
>KYP43087.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 551
Score = 172 bits (437), Expect = 3e-49
Identities = 77/106 (72%), Positives = 91/106 (85%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS+EFNEFC+ GI RQLTT+YTPQQNGVAERKN TIMN+VR +L +KK+PK+FWPE
Sbjct: 257 GEFTSSEFNEFCQKTGIKRQLTTAYTPQQNGVAERKNRTIMNLVRTLLSEKKLPKSFWPE 316
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A W VLNRSPTL VK++TPEE WSG+KP V++FRVFGC+ HVH
Sbjct: 317 AVNWVAYVLNRSPTLVVKNQTPEEAWSGVKPSVEHFRVFGCVTHVH 362
>JAU39535.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Noccaea caerulescens]
Length = 426
Score = 170 bits (430), Expect = 4e-49
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS+ FN+FC+ +GI RQLT +YTPQQNGVAER+N TIMNMVRC+L +K +PK FWPE
Sbjct: 280 GEFTSSMFNQFCEEHGIKRQLTAAYTPQQNGVAERRNRTIMNMVRCLLTEKSMPKRFWPE 339
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
AAKWT +LNRS T V+DK PEE+WSG+KP + YFRVFGC+ HVH
Sbjct: 340 AAKWTCHILNRSMTSAVQDKVPEEVWSGVKPSIGYFRVFGCIGHVH 385
>JAU33129.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 1052
Score = 174 bits (441), Expect = 2e-48
Identities = 78/106 (73%), Positives = 89/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GE+ SNEF +C+ GI+RQLT ++TPQQNGVAERKN TIM MVRC+L DKKVPK FWP+
Sbjct: 293 GEYLSNEFKSYCEEKGITRQLTNAWTPQQNGVAERKNRTIMEMVRCILNDKKVPKRFWPD 352
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A W V VLNRSPT +K+KTPEEMWSG+KPKVDYFRVFGCL HVH
Sbjct: 353 ATMWAVHVLNRSPTSALKEKTPEEMWSGVKPKVDYFRVFGCLGHVH 398
>AFP55578.1 copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 173 bits (438), Expect = 5e-48
Identities = 78/106 (73%), Positives = 90/106 (84%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EFNEFCK +GI RQLT +Y+PQQNGVAER+N TIMN+VR +L +K+VPK++WPE
Sbjct: 434 GEFTSIEFNEFCKSSGIKRQLTAAYSPQQNGVAERRNRTIMNLVRSVLSEKRVPKSYWPE 493
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A KW VLNRSPTL V+D TPEE WSGIKP VDYFRVFGC+AH H
Sbjct: 494 AVKWITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRVFGCIAHAH 539
>JAU33683.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 936
Score = 172 bits (436), Expect = 9e-48
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTSN FN+FCK +GI RQLT +YTPQQNGVAER+N TIMNMVRC+L +K +P++FWPE
Sbjct: 168 GEFTSNAFNQFCKEHGIQRQLTAAYTPQQNGVAERRNRTIMNMVRCLLTEKNMPRSFWPE 227
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
AAKWT VLNRS T VKD PEE WSGIKP V YFRVFGC+ HVH
Sbjct: 228 AAKWTCHVLNRSITNAVKDMVPEECWSGIKPNVGYFRVFGCIGHVH 273
>JAU10377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 273
Score = 161 bits (407), Expect = 3e-47
Identities = 73/106 (68%), Positives = 86/106 (81%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEF SNEF+EFCK GISRQLT +YTPQQNGV+ERKN TIMN VR ML +++VPKAFW E
Sbjct: 152 GEFNSNEFSEFCKSQGISRQLTMAYTPQQNGVSERKNRTIMNAVRSMLNERRVPKAFWSE 211
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A +W V NRSPT +++KTPEE+WSG KP V YFR+FGC+AH H
Sbjct: 212 AVRWCVHTQNRSPTAVLENKTPEEVWSGQKPAVGYFRIFGCVAHAH 257
>JAU09122.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 357
Score = 163 bits (412), Expect = 4e-47
Identities = 73/106 (68%), Positives = 88/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GE+ SNEF FC+ +GI RQLTT++TPQQNGVAERKN TIMNMVR L +K+VPK+FWP+
Sbjct: 191 GEYNSNEFKGFCREHGIKRQLTTAFTPQQNGVAERKNRTIMNMVRAALLEKEVPKSFWPD 250
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A +W +LNRSPTL VKDKTPEE WSG KP V++FRVFGC+ +VH
Sbjct: 251 AVQWVNHILNRSPTLVVKDKTPEEAWSGKKPSVEHFRVFGCVGYVH 296
>GAU30145.1 hypothetical protein TSUD_310960 [Trifolium subterraneum]
Length = 461
Score = 165 bits (418), Expect = 4e-47
Identities = 75/106 (70%), Positives = 87/106 (82%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTSN+FNEFC + GI RQLTT+YTPQQNGV+ERKN T++N+VR ML K VPK FWPE
Sbjct: 245 GEFTSNDFNEFCNVKGIKRQLTTAYTPQQNGVSERKNRTLLNIVRSMLVCKNVPKNFWPE 304
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A KW V+NRSPT+ VK+ TPEE WSG+KP V +FRVFGCLA VH
Sbjct: 305 ALKWATYVMNRSPTISVKNITPEEAWSGVKPSVMHFRVFGCLAFVH 350
>KYP35468.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 508
Score = 165 bits (418), Expect = 1e-46
Identities = 74/106 (69%), Positives = 88/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEF SN+FNEFC +NGI RQLT +YTPQQNGVAERKN TIM+MVR MLC+ K+ K+FWPE
Sbjct: 227 GEFNSNDFNEFCTMNGIRRQLTAAYTPQQNGVAERKNRTIMDMVRTMLCEAKIHKSFWPE 286
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A +WTV +LNR PT+ VKD TPEE WS IKP V + +VFGC+A+VH
Sbjct: 287 AVRWTVYLLNRCPTVAVKDLTPEEAWSSIKPSVRHLKVFGCIAYVH 332
>KYP74877.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1232
Score = 169 bits (428), Expect = 1e-46
Identities = 77/106 (72%), Positives = 86/106 (81%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEF+S F EFC+ GI RQLT +YTPQQNGVAERKN TIMNMVR ML ++VPK FWPE
Sbjct: 466 GEFSSKAFEEFCRSQGIKRQLTAAYTPQQNGVAERKNRTIMNMVRSMLIGRQVPKIFWPE 525
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A KW V +LNRSPT V+D+TPEE WSG+KP V YFRVFGCLAHVH
Sbjct: 526 ATKWCVHILNRSPTAVVQDQTPEEAWSGVKPSVGYFRVFGCLAHVH 571
>CAN65188.1 hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 169 bits (428), Expect = 1e-46
Identities = 75/106 (70%), Positives = 87/106 (82%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EF FC +NGI RQLT +YTPQQN V ERKN TIMNMVR M+ +KK+PK FWPE
Sbjct: 544 GEFTSXEFTNFCDVNGIRRQLTAAYTPQQNXVXERKNRTIMNMVRSMISEKKIPKPFWPE 603
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A WTV VLNRSPTL V++KTP E WSG+KP V++FRVFGC++HVH
Sbjct: 604 AVNWTVHVLNRSPTLAVQNKTPXEAWSGVKPSVEHFRVFGCISHVH 649
>CBI37296.3 unnamed protein product, partial [Vitis vinifera]
Length = 3048
Score = 169 bits (428), Expect = 1e-46
Identities = 78/106 (73%), Positives = 86/106 (81%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EF FC ++GI RQLT +YTPQQNGVAERKN TIMNMVR ML KK+PK FWPE
Sbjct: 585 GEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKLPKTFWPE 644
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A WTV VLNRSPT V++KTPEE W +KP VDYFRVFGCL+HVH
Sbjct: 645 AVNWTVHVLNRSPTFAVQNKTPEEAWGKLKPSVDYFRVFGCLSHVH 690
>CAN74442.1 hypothetical protein VITISV_031467 [Vitis vinifera]
Length = 713
Score = 167 bits (424), Expect = 2e-46
Identities = 76/106 (71%), Positives = 86/106 (81%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEF SNE N+FCK +GI RQ TT+ TPQQNGVAERKN T+MNMVR ML DK +PK FWPE
Sbjct: 405 GEFNSNELNDFCKQSGIKRQSTTAXTPQQNGVAERKNRTMMNMVRSMLSDKNIPKTFWPE 464
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A WT+ VLNR PTL VK+ TPEE WSG+KP VD+F VFGC+AHVH
Sbjct: 465 AVNWTIYVLNRCPTLAVKNVTPEEAWSGVKPSVDHFWVFGCIAHVH 510
>KYP51066.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 392
Score = 162 bits (410), Expect = 2e-46
Identities = 73/106 (68%), Positives = 85/106 (80%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EF FC GI+R+LT +YTPQQNGVAERKN TIMN+VR ML DK+VPK FWPE
Sbjct: 278 GEFTSKEFENFCTQQGITRKLTAAYTPQQNGVAERKNRTIMNVVRAMLHDKQVPKPFWPE 337
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A +W + V NRSPT + +TPEE+WSGIKP+VDYFR FG +AHVH
Sbjct: 338 AVRWCIHVQNRSPTYAIDQRTPEEIWSGIKPRVDYFRTFGYIAHVH 383
>KOM33859.1 hypothetical protein LR48_Vigan02g000900 [Vigna angularis]
Length = 1349
Score = 168 bits (426), Expect = 2e-46
Identities = 79/106 (74%), Positives = 86/106 (81%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EF EFCK GISRQLT +YTPQQNGVAERKN TIMN VR L K+VPKAFWPE
Sbjct: 571 GEFTSMEFEEFCKTQGISRQLTAAYTPQQNGVAERKNKTIMNAVRATLNGKQVPKAFWPE 630
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
AA+W V V NRSPT V+ KTPEE+W G KP+VDYFRVFGC+AH H
Sbjct: 631 AARWCVHVQNRSPTSAVEQKTPEEVWCGKKPRVDYFRVFGCVAHAH 676
>KYP44457.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 167 bits (422), Expect = 2e-46
Identities = 75/106 (70%), Positives = 88/106 (83%)
Frame = +3
Query: 3 GEFTSNEFNEFCKINGISRQLTTSYTPQQNGVAERKNWTIMNMVRCMLCDKKVPKAFWPE 182
GEFTS EFNEFC+ GI RQLT +YTPQQNGVAERKN TIMN+V +L +KK+PK+FWPE
Sbjct: 565 GEFTSLEFNEFCQKTGIKRQLTIAYTPQQNGVAERKNRTIMNLVTTLLSEKKLPKSFWPE 624
Query: 183 AAKWTVRVLNRSPTLPVKDKTPEEMWSGIKPKVDYFRVFGCLAHVH 320
A W VLNRSPTL VK++TPEE WSG+KP V++FRVFGC+ HVH
Sbjct: 625 AVNWVAYVLNRSPTLAVKNQTPEEAWSGVKPSVEHFRVFGCVTHVH 670