BLASTX nr result

ID: Glycyrrhiza28_contig00027120 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00027120
         (236 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAN91743.1 hypothetical protein [Daphnia magna]                        60   6e-18
EFL06024.1 conserved hypothetical protein [Streptomyces sp. AA4]       81   2e-17
EFE68559.1 LOW QUALITY PROTEIN: conserved hypothetical protein, ...    52   6e-07
EFE81974.1 LOW QUALITY PROTEIN: conserved hypothetical protein, ...    51   1e-06

>JAN91743.1 hypothetical protein [Daphnia magna]
          Length = 134

 Score = 60.1 bits (144), Expect(2) = 6e-18
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -1

Query: 113 LAELPSCVTPSLVYYQVGSHAPPTNQPEG 27
           LAELPSCVTPSL YY++GSHAPPTN PEG
Sbjct: 105 LAELPSCVTPSLAYYRIGSHAPPTNNPEG 133



 Score = 57.8 bits (138), Expect(2) = 6e-18
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 220 GITLFASIGYASPLTLHENRIYLDLGLQACTRTT 119
           G   FASIGYASPLTLH+NRIYL +GLQACT TT
Sbjct: 52  GSLYFASIGYASPLTLHDNRIYLVIGLQACTSTT 85


>EFL06024.1 conserved hypothetical protein [Streptomyces sp. AA4]
          Length = 195

 Score = 81.3 bits (199), Expect = 2e-17
 Identities = 45/69 (65%), Positives = 48/69 (69%)
 Frame = -2

Query: 235 FSRQHGITLFASIGYASPLTLHENRIYLDLGLQACTRTTNAWRSYPPASPHRLSTTRSGP 56
           FSRQH IT FAS GYAS L + E RI L   L A TRTT AWRSY PASPHRL+TT SGP
Sbjct: 16  FSRQHRITHFASHGYASRLRVCEQRICLLFLLHAYTRTTIAWRSYLPASPHRLTTTESGP 75

Query: 55  TLPQQTNPK 29
           TL     P+
Sbjct: 76  TLHTPDPPE 84


>EFE68559.1 LOW QUALITY PROTEIN: conserved hypothetical protein, partial
           [Streptomyces ghanaensis ATCC 14672]
          Length = 91

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -3

Query: 234 FLDSMGSLSSPQSATHHLSPFTRTGFTWISGYRLAPGQPTPGGATLLRHPIACLLPGRVP 55
           FLDS+GS +SPQSA H +S     GF +++ Y L PGQP PG        + CL     P
Sbjct: 15  FLDSIGSSTSPQSARHRVSDDVPGGFAYLTSYTLTPGQPPPG--------LDCL-----P 61

Query: 54  RSP-NKPTRR 28
            SP + PT R
Sbjct: 62  ASPHHSPTNR 71


>EFE81974.1 LOW QUALITY PROTEIN: conserved hypothetical protein, partial
           [Streptomyces albus J1074]
          Length = 89

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
 Frame = -3

Query: 234 FLDSMGSLSSPQSATHHLSPFTRTGFTWISGYRLAPGQPTPGGATLLRHPIACLLPGRV- 58
           FLDS+GS +SPQSA H +S    T         L      PG  T LRHPI  LLP R  
Sbjct: 6   FLDSIGSSTSPQSARHQVSATCTTDLPIARPTPLPRDNHRPGWTTFLRHPITHLLPARAT 65

Query: 57  -------PRSPNKPTRRSVSGF 13
                  P+ P +    S++GF
Sbjct: 66  GSTTFHSPKGPERLHGLSITGF 87


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