BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00027067
         (484 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP68633.1 Retrovirus-related Pol polyprotein from transposon TN...   107   1e-31
GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterran...   108   4e-30
GAU24468.1 hypothetical protein TSUD_319450 [Trifolium subterran...   109   4e-30
KYP65734.1 Retrovirus-related Pol polyprotein from transposon TN...   103   8e-30
GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterran...   109   3e-29
GAU15685.1 hypothetical protein TSUD_109430 [Trifolium subterran...   108   3e-29
GAU50539.1 hypothetical protein TSUD_409840 [Trifolium subterran...   107   4e-28
GAU42691.1 hypothetical protein TSUD_302010 [Trifolium subterran...   100   2e-27
GAU40997.1 hypothetical protein TSUD_92220 [Trifolium subterraneum]   104   3e-27
GAU37630.1 hypothetical protein TSUD_60090 [Trifolium subterraneum]    98   6e-27
GAU22921.1 hypothetical protein TSUD_326940 [Trifolium subterran...    97   7e-27
GAU29576.1 hypothetical protein TSUD_153260 [Trifolium subterran...   100   2e-26
KYP37906.1 Retrovirus-related Pol polyprotein from transposon TN...    90   4e-26
KYP34298.1 Retrovirus-related Pol polyprotein from transposon TN...    92   1e-25
KYP49137.1 Retrovirus-related Pol polyprotein from transposon TN...    89   1e-25
KYP42564.1 Retrovirus-related Pol polyprotein from transposon TN...    94   3e-25
KYP61041.1 Retrovirus-related Pol polyprotein from transposon TN...    94   4e-25
KYP40999.1 Retrovirus-related Pol polyprotein from transposon TN...    95   6e-25
GAU41679.1 hypothetical protein TSUD_272630 [Trifolium subterran...    87   1e-24
GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterran...    89   1e-24

>KYP68633.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1108

 Score =  107 bits (268), Expect(2) = 1e-31
 Identities = 59/139 (42%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
 Frame = -3

Query: 482  TTLPPTS*VARLYPPPIARKSTRTTQPPKYLLDY-------HYNXXXXXXXXXXXXXXXX 324
            T + P    A+    P  RKS+R   PP +L DY         N                
Sbjct: 722  TNISPNKPAAQTNYEP--RKSSRIRHPPSHLADYVCETPTCAANQSSSGTPHSLSKFTSL 779

Query: 323  XXXXPAQQAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTH 144
                P+  +F  SLL+ETEP +Y +A+K+ CW+DAMQ E++AL+DN TWV+ DLP GV  
Sbjct: 780  SHLSPSHYSFTFSLLSETEPRTYEEAFKFPCWIDAMQVEIRALEDNKTWVLTDLPAGVIP 839

Query: 143  IANKWVYKIKHKSDGTIER 87
            I NKWV+KIK + DGTIER
Sbjct: 840  IGNKWVFKIKRRDDGTIER 858



 Score = 55.8 bits (133), Expect(2) = 1e-31
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGYTQ EGLDY+DTFSPVAKIT
Sbjct: 860 KARLVAKGYTQIEGLDYLDTFSPVAKIT 887


>GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score =  108 bits (270), Expect(2) = 4e-30
 Identities = 56/119 (47%), Positives = 72/119 (60%)
 Frame = -3

Query: 443  PPPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCASLLTETEP 264
            PPP+ RKSTR T+ P +LLDY  N                      Q ++  SLLTETEP
Sbjct: 856  PPPL-RKSTRITKLPPHLLDYECNNIVHSTKYPISKYTSHNHLSSKQLSYTLSLLTETEP 914

Query: 263  YSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIER 87
             SY++A K+  W+ AM AEL+AL+ N TW I+ LP G   I +KWVYK+K K+DG+IER
Sbjct: 915  SSYSEACKHDHWVKAMNAELQALEQNKTWSIVSLPVGAKPIGSKWVYKVKRKADGSIER 973



 Score = 50.1 bits (118), Expect(2) = 4e-30
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 84   KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
            KARLVAKGY Q EG+DY +TFSPVAK+T
Sbjct: 975  KARLVAKGYNQVEGIDYFETFSPVAKMT 1002


>GAU24468.1 hypothetical protein TSUD_319450 [Trifolium subterraneum]
          Length = 1245

 Score =  109 bits (273), Expect(2) = 4e-30
 Identities = 54/132 (40%), Positives = 77/132 (58%)
 Frame = -3

Query: 482  TTLPPTS*VARLYPPPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQ 303
            T   PTS  + + P    R +TRT +PP +L+DYH +                     + 
Sbjct: 727  TDSSPTSTHSSIIP---TRHTTRTRKPPSHLVDYHCSSITAKTPYPISKFVSHANLSDSY 783

Query: 302  QAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVY 123
              FC SLL + EP +Y  A +++CW+ AM+ EL AL +NHTWVI+DLP+ V  I +KWVY
Sbjct: 784  STFCLSLLADQEPNNYAQASQHECWVKAMKDELTALANNHTWVIVDLPKNVKPIGSKWVY 843

Query: 122  KIKHKSDGTIER 87
            K+K K+DG+I+R
Sbjct: 844  KLKRKTDGSIDR 855



 Score = 48.9 bits (115), Expect(2) = 4e-30
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EG+DY  TFSPVAK+T
Sbjct: 857 KARLVAKGYNQIEGVDYFQTFSPVAKLT 884


>KYP65734.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1013

 Score =  103 bits (256), Expect(2) = 8e-30
 Identities = 59/143 (41%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
 Frame = -3

Query: 482 TTLPPTS*VARLYPPPI-ARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPA 306
           T++PP      L P P  +R STR  QPP YL DYH +                     +
Sbjct: 411 TSIPPEQPHQPLSPAPAPSRHSTRMRQPPSYLKDYHCSLLAPTGRINSFSGISTPHSISS 470

Query: 305 Q----------QAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQ 156
                      + FC S+ T  EP++YT A KY CW+ AM+ EL AL  N TW I+DLP 
Sbjct: 471 TLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAMKTELAALDMNQTWSIVDLPS 530

Query: 155 GVTHIANKWVYKIKHKSDGTIER 87
           G   I  KWVYKIK+ SDG+IER
Sbjct: 531 GKRPIGCKWVYKIKYLSDGSIER 553



 Score = 54.7 bits (130), Expect(2) = 8e-30
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY+QTEGLDY+DT+SPVAK+T
Sbjct: 555 KARLVAKGYSQTEGLDYLDTYSPVAKLT 582


>GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterraneum]
          Length = 1494

 Score =  109 bits (272), Expect(2) = 3e-29
 Identities = 52/114 (45%), Positives = 69/114 (60%)
 Frame = -3

Query: 428  RKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCASLLTETEPYSYTD 249
            R+STR  Q P +L+DY  N                     +   FC SLL +TEP +Y +
Sbjct: 876  RRSTRIKQTPLHLMDYQCNAITHKTPYPISSFISHNNLSKSYSTFCLSLLADTEPTTYAE 935

Query: 248  AWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIER 87
            A K++CW+ AM+ EL AL +N TW+I DLP+GV  I +KWVYKIK K+DGTI+R
Sbjct: 936  ASKHECWVKAMKNELTALANNKTWIITDLPEGVKPIGSKWVYKIKRKADGTIDR 989



 Score = 46.6 bits (109), Expect(2) = 3e-29
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 84   KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
            KARLVAKGY Q EG+D+  TFSPVAK+T
Sbjct: 991  KARLVAKGYNQIEGVDFSQTFSPVAKMT 1018


>GAU15685.1 hypothetical protein TSUD_109430 [Trifolium subterraneum]
          Length = 1245

 Score =  108 bits (269), Expect(2) = 3e-29
 Identities = 52/114 (45%), Positives = 68/114 (59%)
 Frame = -3

Query: 428  RKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCASLLTETEPYSYTD 249
            RKSTR   PP +LLDY  N                    P+  ++C SLLT+ EP +Y +
Sbjct: 739  RKSTRLRNPPLHLLDYSCNNVSHTTPYPINKYISHQNLSPSYSSYCMSLLTDHEPTTYAE 798

Query: 248  AWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIER 87
            A  + CW+ AMQ EL AL  N+TW I+DLP G+  I +KWVYKIK K+DG+I+R
Sbjct: 799  ASTHDCWIKAMQTELNALASNNTWAIVDLPAGIKPIGSKWVYKIKRKADGSIDR 852



 Score = 47.8 bits (112), Expect(2) = 3e-29
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EG+DY +TFSPV K+T
Sbjct: 854 KARLVAKGYNQVEGVDYFETFSPVEKMT 881


>GAU50539.1 hypothetical protein TSUD_409840 [Trifolium subterraneum]
          Length = 1245

 Score =  107 bits (267), Expect(2) = 4e-28
 Identities = 51/114 (44%), Positives = 68/114 (59%)
 Frame = -3

Query: 428  RKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCASLLTETEPYSYTD 249
            R+STR  Q P +L+DY  N                     +   FC  LL +TEP +Y +
Sbjct: 790  RRSTRIKQTPLHLMDYQCNAITHKTPYPISSFISHNNLSKSYSTFCLPLLADTEPTTYAE 849

Query: 248  AWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIER 87
            A K++CW+ AM+ EL AL +N TW+I DLP+GV  I +KWVYKIK K+DGTI+R
Sbjct: 850  ASKHECWVKAMKNELTALANNKTWIITDLPEGVKPIGSKWVYKIKRKADGTIDR 903



 Score = 44.7 bits (104), Expect(2) = 4e-28
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -2

Query: 81  ARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           ARLVAKGY Q EG+D+  TFSPVAK+T
Sbjct: 906 ARLVAKGYNQIEGVDFSQTFSPVAKMT 932


>GAU42691.1 hypothetical protein TSUD_302010 [Trifolium subterraneum]
          Length = 1183

 Score = 99.8 bits (247), Expect(2) = 2e-27
 Identities = 54/132 (40%), Positives = 72/132 (54%)
 Frame = -3

Query: 482  TTLPPTS*VARLYPPPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQ 303
            TT  PT+       P   RKS R  + P +L DY  N                      Q
Sbjct: 637  TTNTPTN-----ISPSTTRKSARPKKAPTHLKDYACNNVTKSILYPITQYTCHDNLSTKQ 691

Query: 302  QAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVY 123
            +++  SLLTE EP +Y++A K++ W+ AM+ EL+ALQ N+TW I+ LP     I +KWVY
Sbjct: 692  KSYTMSLLTENEPTTYSEACKHEKWIKAMKTELQALQQNNTWTIVSLPPEAKPIGSKWVY 751

Query: 122  KIKHKSDGTIER 87
            KIK KSDG+IER
Sbjct: 752  KIKRKSDGSIER 763



 Score = 50.1 bits (118), Expect(2) = 2e-27
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EG+DY +TFSPVAK+T
Sbjct: 765 KARLVAKGYNQVEGIDYFETFSPVAKMT 792


>GAU40997.1 hypothetical protein TSUD_92220 [Trifolium subterraneum]
          Length = 1157

 Score =  104 bits (260), Expect(2) = 3e-27
 Identities = 59/132 (44%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
 Frame = -3

Query: 473  PPTS*VARLYP---PPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQ 303
            PP+S    + P   PP  R+STR    P +LLDY  N                      Q
Sbjct: 721  PPSSDFNSIPPLSSPPPKRQSTRLKTRPIHLLDYRCNNVTSKTPYPISNYTSHSNLSSHQ 780

Query: 302  QAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVY 123
              +  SLL ++EP SY +A K   W+ AMQ EL AL  NHTW I+ LP GVT I +KWVY
Sbjct: 781  LTYTLSLLNDSEPSSYNEACKSDNWIKAMQNELHALSQNHTWTIVGLPSGVTPIGSKWVY 840

Query: 122  KIKHKSDGTIER 87
            KIK  SDGTIER
Sbjct: 841  KIKRHSDGTIER 852



 Score = 44.3 bits (103), Expect(2) = 3e-27
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EG+D+ +TFS VAK+T
Sbjct: 854 KARLVAKGYNQREGIDFFETFSLVAKMT 881


>GAU37630.1 hypothetical protein TSUD_60090 [Trifolium subterraneum]
          Length = 2486

 Score = 98.2 bits (243), Expect(2) = 6e-27
 Identities = 50/118 (42%), Positives = 66/118 (55%)
 Frame = -3

Query: 440 PPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCASLLTETEPY 261
           P   RKSTR  + P +L DY  N                      Q+++  SLL E EP 
Sbjct: 620 PSTTRKSTRPKKAPTHLKDYACNNVTKSTLYPFTQYTCHDNLSTKQKSYTMSLLIENEPT 679

Query: 260 SYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIER 87
           +Y++A K++ W+  M+ EL+ALQ N+TW I+ LPQ    I +KWVYKIK KSDG IER
Sbjct: 680 TYSEACKHEQWIKDMKTELQALQQNNTWTIVSLPQEAKPIGSKWVYKIKRKSDGRIER 737



 Score = 50.1 bits (118), Expect(2) = 6e-27
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EG+DY +TFSPVAK+T
Sbjct: 739 KARLVAKGYNQVEGIDYFETFSPVAKMT 766


>GAU22921.1 hypothetical protein TSUD_326940 [Trifolium subterraneum]
          Length = 1122

 Score = 97.4 bits (241), Expect(2) = 7e-27
 Identities = 51/132 (38%), Positives = 70/132 (53%)
 Frame = -3

Query: 482 TTLPPTS*VARLYPPPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQ 303
           T++ P      + P P  RKSTR +  P +L DY  N                     + 
Sbjct: 593 TSITPADPSPTIQPTPPHRKSTRISTKPVHLSDYLCNQS-------------------SS 633

Query: 302 QAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVY 123
               +S   +TEP  Y +A K+QCW++AM AE+ AL  N TWV++D P  V  I +KWVY
Sbjct: 634 SLVSSSSDAQTEPKDYKEASKHQCWIEAMNAEIGALNQNRTWVLVDQPANVKPIGSKWVY 693

Query: 122 KIKHKSDGTIER 87
           K+KHK+DG+IER
Sbjct: 694 KVKHKADGSIER 705



 Score = 50.4 bits (119), Expect(2) = 7e-27
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EGLD+ DT+SPVAKIT
Sbjct: 707 KARLVAKGYNQIEGLDFFDTYSPVAKIT 734


>GAU29576.1 hypothetical protein TSUD_153260 [Trifolium subterraneum]
          Length = 1100

 Score = 99.8 bits (247), Expect(2) = 2e-26
 Identities = 51/118 (43%), Positives = 68/118 (57%)
 Frame = -3

Query: 440  PPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCASLLTETEPY 261
            P   RKSTR  + P +L DY  N                      Q+++  SLLTE EP 
Sbjct: 647  PSTTRKSTRPKKVPTHLKDYACNNVTKSILYPITQYTCHDNLSTKQKSYTMSLLTENEPT 706

Query: 260  SYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIER 87
            +Y++A K++ W+ AM+ EL+ALQ N+TW I+ LP     I +KWVYKIK KSDG+IER
Sbjct: 707  TYSEACKHEQWIKAMKTELQALQQNNTWTIVYLPPEAKPIGSKWVYKIKRKSDGSIER 764



 Score = 46.6 bits (109), Expect(2) = 2e-26
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGY Q EG+ Y +TFSPVAK+T
Sbjct: 766 KARLVAKGYNQVEGIYYFETFSPVAKMT 793


>KYP37906.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1097

 Score = 90.1 bits (222), Expect(2) = 4e-26
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
 Frame = -3

Query: 479 TLPPTS*VARLYPPPIARKSTRTTQPPKYLLDYHY-------NXXXXXXXXXXXXXXXXX 321
           T P +S V+ + PPP  +KSTR  + P YL DYH+       +                 
Sbjct: 564 TTPTSSPVSVVPPPPFVQKSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNHISYS 623

Query: 320 XXXPAQQAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHI 141
              P+Q+AF  S+ +  EP SY +A + + W  A+Q EL AL+ N+TW++  LP     +
Sbjct: 624 NLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVV 683

Query: 140 ANKWVYKIKHKSDGTIERSR 81
             KWV+K+K  SDGTIER +
Sbjct: 684 GCKWVFKLKFNSDGTIERHK 703



 Score = 55.5 bits (132), Expect(2) = 4e-26
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGYTQTEGLDY+DTFSPV K+T
Sbjct: 703 KARLVAKGYTQTEGLDYLDTFSPVVKMT 730


>KYP34298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1002

 Score = 91.7 bits (226), Expect(2) = 1e-25
 Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
 Frame = -3

Query: 479 TLPPTS*VARLYPPPIARKSTRTTQPPKYLLDYHY-------NXXXXXXXXXXXXXXXXX 321
           T P +S V+ + PPP  RKSTR  + P YL DYH+       +                 
Sbjct: 408 TTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNHISYS 467

Query: 320 XXXPAQQAFCASLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHI 141
              P+Q+AF  S+ +  EP SY +A + + W  A+Q EL AL+ N+TW++  LP     +
Sbjct: 468 NLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVV 527

Query: 140 ANKWVYKIKHKSDGTIERSR 81
             KWV+K+K  SDGTIER +
Sbjct: 528 GCKWVFKLKFNSDGTIERHK 547



 Score = 52.4 bits (124), Expect(2) = 1e-25
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGYTQTE LDY+DTFSPV K+T
Sbjct: 547 KARLVAKGYTQTETLDYLDTFSPVVKMT 574


>KYP49137.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 806

 Score = 88.6 bits (218), Expect(2) = 1e-25
 Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
 Frame = -3

Query: 443 PPPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXP----AQQAFCASLLT 276
           P P+ R+S R  Q P YL DY+ +                         A   + AS+  
Sbjct: 201 PVPL-RRSIRHKQRPAYLKDYNCHTTSQQANQGTSYPIHSFVSFAQLSPAHAVYSASISD 259

Query: 275 ETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGT 96
             EP S+++A K +CW  AM+AE+ AL++N TW ++ LP G+  I NKWVYKIK +SDGT
Sbjct: 260 CKEPNSFSEANKLECWKRAMEAEISALENNGTWTLVHLPPGIISIGNKWVYKIKTRSDGT 319

Query: 95  IER 87
           IER
Sbjct: 320 IER 322



 Score = 55.1 bits (131), Expect(2) = 1e-25
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGYTQ EGLDY+DTFSPVAK+T
Sbjct: 324 KARLVAKGYTQIEGLDYLDTFSPVAKLT 351


>KYP42564.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score = 93.6 bits (231), Expect(2) = 3e-25
 Identities = 52/125 (41%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
 Frame = -3

Query: 440  PPIARKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQAFCAS-------L 282
            P   RKSTR    P YL DYH N                     +  +  AS       +
Sbjct: 838  PSQLRKSTRHKCSPAYLKDYHCNLLIGVPPPEDKHIRYPLNTVLSYDSLSASYSRYVLSI 897

Query: 281  LTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSD 102
             T  EP+++  A K + W++AMQAEL AL+ N TW I+ LP G T I +KWVYKIK+KSD
Sbjct: 898  TTHVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSD 957

Query: 101  GTIER 87
            G+IER
Sbjct: 958  GSIER 962



 Score = 48.9 bits (115), Expect(2) = 3e-25
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -2

Query: 84   KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
            KARLV KGYTQ +GLDY DTF+PVAK++
Sbjct: 964  KARLVVKGYTQIQGLDYFDTFAPVAKLS 991


>KYP61041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 788

 Score = 93.6 bits (231), Expect(2) = 4e-25
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
 Frame = -3

Query: 449 LYPPPIA-RKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXPAQQA-----FCA 288
           +YPPP   R+S+RT  PP YL D+H N                      + +     F  
Sbjct: 518 IYPPPTQIRRSSRTHLPPSYLKDFHCNIASTIPTSSTVRYPLHSFLSYNRLSNSFHHFVC 577

Query: 287 SLLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHK 108
           S+    EP+SY++A K +CW+ AM+ EL AL+ N+TW + +LP     I  +WVYK+KH 
Sbjct: 578 SISVTIEPHSYSEASKLECWVKAMKDELAALKMNNTWTLTNLPPDKVPIGCRWVYKVKHN 637

Query: 107 SDGTIER 87
           +DGTIER
Sbjct: 638 ADGTIER 644



 Score = 48.5 bits (114), Expect(2) = 4e-25
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLV+KGY Q E LD++DTFSPVAKIT
Sbjct: 646 KARLVSKGYNQLEDLDFLDTFSPVAKIT 673


>KYP40999.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1029

 Score = 95.1 bits (235), Expect(2) = 6e-25
 Identities = 49/122 (40%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
 Frame = -3

Query: 428  RKSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXP--------AQQAFCASLLTE 273
            R STR   PP YL DYH N                             + ++F  SL + 
Sbjct: 825  RVSTRQRHPPNYLRDYHCNIVNHHAPLTHSTSVPHSLSAFLSYNRLSPSYKSFVLSLTSS 884

Query: 272  TEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTI 93
             EP SY  A ++ CW DAM  E+ AL+ N +W++ DLPQG   I  KW+YKIKHK+DG+I
Sbjct: 885  AEPQSYNQAIRHACWKDAMDKEIIALEQNQSWILTDLPQGKHPIGCKWIYKIKHKADGSI 944

Query: 92   ER 87
            ER
Sbjct: 945  ER 946



 Score = 46.2 bits (108), Expect(2) = 6e-25
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 84   KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
            KARLVAKGY Q EG+D+ DTFSPV K T
Sbjct: 948  KARLVAKGYNQQEGVDFFDTFSPVVKHT 975


>GAU41679.1 hypothetical protein TSUD_272630 [Trifolium subterraneum]
          Length = 1178

 Score = 86.7 bits (213), Expect(2) = 1e-24
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
 Frame = -3

Query: 443 PPPIARKSTRTTQPPKYLLDYH-------YNXXXXXXXXXXXXXXXXXXXXPAQQAFCAS 285
           P P+ RKS+R  Q P++L  +H       ++                    P   A C S
Sbjct: 603 PAPL-RKSSRVIQRPRHLEGFHCETLIGTHSAASSNTVYPLSSVLSYNNCAPNYHALCCS 661

Query: 284 LLTETEPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKS 105
           +    EP +YT A K++CW +AM AEL AL +N TW ++DLP G   +  KWVYK+K+ +
Sbjct: 662 ISAIVEPKTYTQASKFECWRNAMNAELLALDENKTWSVVDLPNGKVPVGCKWVYKVKYHA 721

Query: 104 DGTIER 87
           +G+IER
Sbjct: 722 NGSIER 727



 Score = 53.9 bits (128), Expect(2) = 1e-24
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 84  KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
           KARLVAKGYTQ EG+DY DTFSPVAKIT
Sbjct: 729 KARLVAKGYTQLEGVDYFDTFSPVAKIT 756


>GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterraneum]
          Length = 1469

 Score = 89.0 bits (219), Expect(2) = 1e-24
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
 Frame = -3

Query: 425  KSTRTTQPPKYLLDYHYNXXXXXXXXXXXXXXXXXXXXP--------AQQAFCASLLTET 270
            +STR    P YL DY  N                                AF  SL   T
Sbjct: 900  RSTRLKHAPSYLSDYVCNQSTTSPGTQSSSGSLYPISDYHSLKNLSSIHHAFTVSLTHNT 959

Query: 269  EPYSYTDAWKYQCWLDAMQAELKALQDNHTWVIIDLPQGVTHIANKWVYKIKHKSDGTIE 90
            EP SY +A K++CW  AM  EL+AL    TWVI+DLP  +  I +KWVYK+K+K+DGTIE
Sbjct: 960  EPKSYLEACKFECWQKAMDDELEALTKTGTWVIVDLPSHIKPIGSKWVYKVKYKADGTIE 1019

Query: 89   R 87
            R
Sbjct: 1020 R 1020



 Score = 51.2 bits (121), Expect(2) = 1e-24
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -2

Query: 84   KARLVAKGYTQTEGLDYMDTFSPVAKIT 1
            KARLVAKGY Q EGLD+ DTFSPVAK+T
Sbjct: 1022 KARLVAKGYNQVEGLDFFDTFSPVAKLT 1049