BLASTX nr result

ID: Glycyrrhiza28_contig00027066 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00027066
         (575 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU49814.1 hypothetical protein TSUD_194670 [Trifolium subterran...   100   4e-21
XP_003609294.1 DEAD-box ATP-dependent RNA helicase-like protein ...    95   3e-19
KYP51114.1 DEAD-box ATP-dependent RNA helicase 52B [Cajanus cajan]     75   1e-12
XP_003541505.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    72   3e-11
XP_012573465.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    70   1e-10
KHN47164.1 DEAD-box ATP-dependent RNA helicase 52B [Glycine soja]      69   2e-10
KHN15101.1 DEAD-box ATP-dependent RNA helicase 52 [Glycine soja]       66   3e-09
XP_003550826.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    66   3e-09
XP_015946381.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    64   2e-08
XP_016177780.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    64   2e-08
XP_007154991.1 hypothetical protein PHAVU_003G163700g [Phaseolus...    62   8e-08
XP_017428885.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    59   7e-07
XP_014506680.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52...    57   2e-06

>GAU49814.1 hypothetical protein TSUD_194670 [Trifolium subterraneum]
          Length = 670

 Score =  100 bits (248), Expect = 4e-21
 Identities = 53/118 (44%), Positives = 64/118 (54%), Gaps = 22/118 (18%)
 Frame = +3

Query: 3   RGNYGGRDFRNASGPPEFEXXXXXXXXXXXXADH----------------------HAVD 116
           RGNYGGRDFR A+ P   E             D+                      HA +
Sbjct: 553 RGNYGGRDFRTANEPGMVENYNNYNSSYNNYGDNGFHNVPEQVENYNNNGTYSNGDHAAN 612

Query: 117 SHTDTSFDIKNSINDSSFDAPNTVFAGSYTCADADLYEGVKGKDGPCGFASVVATGWD 290
           ++TDTS DI+NS N+ SFD+ NT FAG Y C DA L EG  G++GPCG+ASVV TGWD
Sbjct: 613 TYTDTSIDIQNSNNNCSFDSTNTGFAGGYNCTDAGLLEGSDGQNGPCGYASVVPTGWD 670


>XP_003609294.1 DEAD-box ATP-dependent RNA helicase-like protein [Medicago
           truncatula] AES91491.1 DEAD-box ATP-dependent RNA
           helicase-like protein [Medicago truncatula]
          Length = 671

 Score = 94.7 bits (234), Expect = 3e-19
 Identities = 52/118 (44%), Positives = 60/118 (50%), Gaps = 22/118 (18%)
 Frame = +3

Query: 3   RGNYGGRDFRNASGPPEFEXXXXXXXXXXXXADH----------------------HAVD 116
           RGNYGGRDFRNA+ P   E             D+                      HA +
Sbjct: 554 RGNYGGRDFRNATEPGMVENYNSYNSNYSNYGDNGYHNVPEQVQNYNYNGTYNNGDHAAN 613

Query: 117 SHTDTSFDIKNSINDSSFDAPNTVFAGSYTCADADLYEGVKGKDGPCGFASVVATGWD 290
           S+TD S D+ NS ND SFD  NTV AG +   DA L EG  G +GPCG+ASVV TGWD
Sbjct: 614 SYTDASLDVTNSNNDCSFDNTNTVVAGGFNYTDAGLLEGSDGTNGPCGYASVVPTGWD 671


>KYP51114.1 DEAD-box ATP-dependent RNA helicase 52B [Cajanus cajan]
          Length = 554

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 9/104 (8%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPPEFEXXXXXXXXXXXXADH----HAVDSHTDTSFDIKNSINDSSFD 173
           G+YGGRDFRNA+ P   E            A+H    ++  ++TDTS+DI+NS  DSSFD
Sbjct: 454 GSYGGRDFRNATEP---EVQNYNCYSTYGNANHAMEFYSDTTYTDTSYDIQNSHRDSSFD 510

Query: 174 APNTVFAG-----SYTCADADLYEGVKGKDGPCGFASVVATGWD 290
           + N   A      +   +  DLY  V  +DGPCG+ S+VATGWD
Sbjct: 511 SLNEASARRNYYQTGVNSGVDLYGVVVEEDGPCGYESIVATGWD 554


>XP_003541505.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine
           max] KRH20283.1 hypothetical protein GLYMA_13G168000
           [Glycine max]
          Length = 586

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 47/100 (47%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPPEFEXXXXXXXXXXXXADHHAVDSH---TDTSFDIKNSINDSSFDA 176
           G+YGGRDFRN     E E            ADH AV+S+    D S+DI+NS  DSSFD 
Sbjct: 491 GSYGGRDFRNVI---EAEVENNNCYSTNVNADH-AVESYYTADDASYDIQNSNIDSSFDT 546

Query: 177 PNTVFAGSYTCADADLYEGV--KGKDGPCGFASVVATGWD 290
            N   AGSY   D     G     +DGP G+AS+VATGWD
Sbjct: 547 LNIASAGSYNHTDFCELNGAGRVEEDGPLGYASIVATGWD 586


>XP_012573465.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like [Cicer
           arietinum]
          Length = 658

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 23/119 (19%)
 Frame = +3

Query: 3   RGNYGGRDFRNASGPP-------------------EFEXXXXXXXXXXXXADH----HAV 113
           R NYGGRDFRNA+ P                    +F             + +    H+ 
Sbjct: 541 RSNYGGRDFRNAAEPVADNYNYNRYNSTYNNYGDRDFNNVPQQVENYHYNSTYSNGDHSA 600

Query: 114 DSHTDTSFDIKNSINDSSFDAPNTVFAGSYTCADADLYEGVKGKDGPCGFASVVATGWD 290
            S+ DTS +I+NS N S     NTVFAGS+  + + L EG  G +GPCG+ SVV TGWD
Sbjct: 601 TSYIDTSLEIQNSNNYSYDTTNNTVFAGSHNYSGSGLLEGSDG-NGPCGYESVVPTGWD 658


>KHN47164.1 DEAD-box ATP-dependent RNA helicase 52B [Glycine soja]
          Length = 475

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 48/102 (47%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPPEFEXXXXXXXXXXXXADHHAVDSH---TDTSFDIKNSINDSSFDA 176
           G+YGGRDFRN     E E            ADH AV+S+    D S+DI+NS  DSSFD 
Sbjct: 379 GSYGGRDFRNVI---EAEVENNNCYSTNVNADH-AVESYYTADDASYDIQNSNIDSSFDT 434

Query: 177 PNTVFAGSYTCADADLYE----GVKGKDGPCGFASVVATGWD 290
            N   AGSY     D  E    G   +DGP G+AS+VATGWD
Sbjct: 435 LNIASAGSY-YNHTDFCELNGAGRVEEDGPLGYASIVATGWD 475


>KHN15101.1 DEAD-box ATP-dependent RNA helicase 52 [Glycine soja]
          Length = 529

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPP--EFEXXXXXXXXXXXXADHHAVD-SHTDTSFDIKNSINDSSFDA 176
           G+YGG DFRN + P    +               + A D S+ DTS+DI+NS  D SF+ 
Sbjct: 429 GSYGGHDFRNVTEPEVQNYNCYNTNGNAVQFVESYTADDASYVDTSYDIQNSNIDCSFEC 488

Query: 177 PNTVFAGSYTCADADLYEGVKGK---DGPCGFASVVATGWD 290
            +   +GSY   D+    G  G+   DGP G+AS+VATGWD
Sbjct: 489 LHIASSGSYNHTDSCELNGGGGRVEEDGPRGYASIVATGWD 529


>XP_003550826.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52B [Glycine max]
           KRH03709.1 hypothetical protein GLYMA_17G115700 [Glycine
           max]
          Length = 610

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPP--EFEXXXXXXXXXXXXADHHAVD-SHTDTSFDIKNSINDSSFDA 176
           G+YGG DFRN + P    +               + A D S+ DTS+DI+NS  D SF+ 
Sbjct: 510 GSYGGHDFRNVTEPEVQNYNCYNTNGNAVQFVESYTADDASYVDTSYDIQNSNIDCSFEC 569

Query: 177 PNTVFAGSYTCADADLYEGVKGK---DGPCGFASVVATGWD 290
            +   +GSY   D+    G  G+   DGP G+AS+VATGWD
Sbjct: 570 LHIASSGSYNHTDSCELNGGGGRVEEDGPRGYASIVATGWD 610


>XP_015946381.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Arachis
           duranensis]
          Length = 561

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
 Frame = +3

Query: 12  YGGRDFRNASGPPEFEXXXXXXXXXXXXADHHAV---DSHT-DTSFDIKNS---INDSSF 170
           YGGRDFRN +  PE E             D+H+    DS+  D +FDIK+S    + SS+
Sbjct: 471 YGGRDFRNVT-EPEVENY-----------DNHSTTFGDSYNADYTFDIKDSNEYADSSSY 518

Query: 171 DAPNTVFAGS---YTCADADLYEGVKGKDGPCGFASVVATGWD 290
           +  N+V   +   YT A+ DLY G   +DGP G+AS+VATGWD
Sbjct: 519 EMANSVPPATSCHYTYANTDLYGGGNVEDGPGGYASIVATGWD 561


>XP_016177780.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Arachis
           ipaensis]
          Length = 681

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
 Frame = +3

Query: 12  YGGRDFRNASGPPEFEXXXXXXXXXXXXADHHAV---DSHT-DTSFDIKNS---INDSSF 170
           YGGRDFRN +  PE E             D+H+    DS+  D +FDIK+S    + SS+
Sbjct: 591 YGGRDFRNVT-EPEVENY-----------DNHSTTFGDSYNADYTFDIKDSNEYADSSSY 638

Query: 171 DAPNTVFAGS---YTCADADLYEGVKGKDGPCGFASVVATGWD 290
           +  N+V   +   YT A+ DLY G   +DGP G+AS+VATGWD
Sbjct: 639 EMANSVPPATSCHYTYANTDLYGGGNVEDGPGGYASIVATGWD 681


>XP_007154991.1 hypothetical protein PHAVU_003G163700g [Phaseolus vulgaris]
           ESW26985.1 hypothetical protein PHAVU_003G163700g
           [Phaseolus vulgaris]
          Length = 642

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPPEFEXXXXXXXXXXXXADHHA----VDSHTDTSFDIKNSINDSSFD 173
           G+YGGRDFRN   P E E            ADH        S+ DTS+D++NS+ ++SFD
Sbjct: 545 GSYGGRDFRN---PTEPEVQSYNCYGSHGNADHGVESVGTTSYIDTSYDMQNSLIETSFD 601

Query: 174 APNTVFAGSYTCADADLY--EGVKGKDGPCGFASVVATGWD 290
           + +   +   T   +     +G  G+DGP G+ ++V TGWD
Sbjct: 602 SLSINCSNDQTDVKSGELCGDGKVGEDGPSGYEAIVPTGWD 642


>XP_017428885.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Vigna
           angularis] KOM33046.1 hypothetical protein
           LR48_Vigan01g260200 [Vigna angularis] BAT76366.1
           hypothetical protein VIGAN_01435400 [Vigna angularis
           var. angularis]
          Length = 617

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPPEFEXXXXXXXXXXXXADH----HAVDSHTDTSFDIKNSINDSSFD 173
           G+YGGRDFRN   P E E            AD+     +  S+ DTS+D++N   ++SFD
Sbjct: 520 GSYGGRDFRN---PTEPEVQSYNCYGSHGNADNAVESFSTTSYVDTSYDMQNYPVETSFD 576

Query: 174 APNTVFAGSYTCADADLYE---GVK-GKDGPCGFASVVATGWD 290
             N   + SY   D +  E   GV  G++GP G+AS+V TGWD
Sbjct: 577 --NLNISCSYEEGDVNSIELCGGVTVGEEGPSGYASIVPTGWD 617


>XP_014506680.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Vigna
           radiata var. radiata]
          Length = 611

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
 Frame = +3

Query: 6   GNYGGRDFRNASGPPEFEXXXXXXXXXXXXADH----HAVDSHTDTSFDIKNSINDSSFD 173
           G+YGGRDFRN   P E E            AD+     +  S+ DTS+D++N   ++SF+
Sbjct: 514 GSYGGRDFRN---PTEPEVQSYNCYGSHGNADNGVESFSTTSYVDTSYDMQNYPVETSFE 570

Query: 174 APNTVFAGSYTCADADLYE---GVK-GKDGPCGFASVVATGWD 290
             N   + SY   D +  E   GV  G++GP G+AS+V TGWD
Sbjct: 571 --NLNISCSYDEGDGNSVEPCGGVTVGEEGPSGYASIVPTGWD 611