BLASTX nr result
ID: Glycyrrhiza28_contig00026959
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00026959
(275 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP43701.1 Retrovirus-related Pol polyprotein from transposon TN... 99 1e-23
KYP58720.1 Retrovirus-related Pol polyprotein from transposon TN... 99 1e-22
KYP47392.1 Retrovirus-related Pol polyprotein from transposon TN... 99 2e-22
KYP55050.1 Retrovirus-related Pol polyprotein from transposon TN... 97 6e-22
KYP39682.1 Retrovirus-related Pol polyprotein from transposon TN... 96 7e-22
KYP72360.1 Copia protein [Cajanus cajan] 89 1e-20
KYP66820.1 Retrovirus-related Pol polyprotein from transposon TN... 88 4e-20
KYP60345.1 Retrovirus-related Pol polyprotein from transposon TN... 88 8e-20
KYP77194.1 Retrovirus-related Pol polyprotein from transposon TN... 87 2e-19
KYP76714.1 Retrovirus-related Pol polyprotein from transposon TN... 91 2e-19
KYP73413.1 Retrovirus-related Pol polyprotein from transposon TN... 86 3e-19
GAV87483.1 hypothetical protein CFOL_v3_30909 [Cephalotus follic... 84 1e-17
GAV82615.1 hypothetical protein CFOL_v3_26066, partial [Cephalot... 82 1e-17
GAV59369.1 hypothetical protein CFOL_v3_02900, partial [Cephalot... 82 2e-17
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [A... 83 4e-17
GAV58787.1 hypothetical protein CFOL_v3_02320, partial [Cephalot... 81 7e-17
GAV58988.1 hypothetical protein CFOL_v3_02521, partial [Cephalot... 80 3e-16
GAV76564.1 hypothetical protein CFOL_v3_20037, partial [Cephalot... 79 3e-16
GAV85204.1 hypothetical protein CFOL_v3_28642, partial [Cephalot... 77 6e-16
CAN61870.1 hypothetical protein VITISV_002413 [Vitis vinifera] 81 7e-16
>KYP43701.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 264
Score = 99.4 bits (246), Expect = 1e-23
Identities = 58/136 (42%), Positives = 70/136 (51%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSK---------------------LGLMLSK------- 179
NG+K + YL GTMDM L YSNVSK G + +
Sbjct: 67 NGVKQILRYLRGTMDMGLLYSNVSKPELNGYADAGYLSDPHNGKSQTGYLFTSGGTAISW 126
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+S IQ I+ETCGLS GKM +T++YEDN AC
Sbjct: 127 RSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTVIYEDNAAC 186
Query: 49 IAQVKEWYIKRDTTKY 2
IAQ+K+ YIK D TK+
Sbjct: 187 IAQLKDGYIKGDRTKH 202
>KYP58720.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 428
Score = 99.4 bits (246), Expect = 1e-22
Identities = 58/136 (42%), Positives = 70/136 (51%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSK---------------------LGLMLSK------- 179
NG+K + YL GTMDM L YSNVSK G + +
Sbjct: 231 NGVKQILRYLRGTMDMGLLYSNVSKPELNGYADAGYLSDPHNGKSQTGYLFTSGGTAISW 290
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+S IQ I+ETCGLS GKM +T++YEDN AC
Sbjct: 291 RSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTVIYEDNVAC 350
Query: 49 IAQVKEWYIKRDTTKY 2
IAQ+K+ YIK D TK+
Sbjct: 351 IAQLKDGYIKGDRTKH 366
>KYP47392.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 814
Score = 99.4 bits (246), Expect = 2e-22
Identities = 58/136 (42%), Positives = 70/136 (51%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSK---------------------LGLMLSK------- 179
NG+K + YL GTMDM L YSNVSK G + +
Sbjct: 617 NGVKQILRYLRGTMDMGLLYSNVSKPELNGYADAGYLSDPHNGKSQTGYLFTSGGTAISW 676
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+S IQ I+ETCGLS GKM +T++YEDN AC
Sbjct: 677 RSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTVIYEDNAAC 736
Query: 49 IAQVKEWYIKRDTTKY 2
IAQ+K+ YIK D TK+
Sbjct: 737 IAQLKDGYIKGDRTKH 752
>KYP55050.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 376
Score = 97.1 bits (240), Expect = 6e-22
Identities = 59/136 (43%), Positives = 70/136 (51%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGL-------MLSK--------------------- 179
NG+K + YL+GTMDM L YSNVSK L LS
Sbjct: 179 NGVKQILRYLIGTMDMGLLYSNVSKPELNGYADAGYLSDPHNGKSKTRYLFTSGCTAISW 238
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+ I+ I+ETCGLS GKM +TI+YEDN AC
Sbjct: 239 QSVKQTILATSSNHAKILALHEASRECVWLRFVIEHIRETCGLSSGKMTSTIIYEDNVAC 298
Query: 49 IAQVKEWYIKRDTTKY 2
IAQ+K+ YIK D TK+
Sbjct: 299 IAQLKDGYIKGDRTKH 314
>KYP39682.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 310
Score = 95.9 bits (237), Expect = 7e-22
Identities = 56/136 (41%), Positives = 69/136 (50%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGL-------MLSK--------------------- 179
NG+K + CYL GTM+M L YSNV K+ L LS
Sbjct: 115 NGVKKILCYLRGTMNMGLLYSNVQKIELNGYADASYLSDPQNGKSQTRYLFTSGGTTISW 174
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+S IQ I+ETCGLS GKM +T++YEDN C
Sbjct: 175 GSVKQTISTTSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTVIYEDNVVC 234
Query: 49 IAQVKEWYIKRDTTKY 2
IA++K+ YIK D K+
Sbjct: 235 IAKLKDGYIKGDRMKH 250
>KYP72360.1 Copia protein [Cajanus cajan]
Length = 151
Score = 89.0 bits (219), Expect = 1e-20
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = -2
Query: 178 LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKRDTTKY 2
LA HEAS EC WL+S IQ I+ETCGLS GKM +TI+YEDN ACIAQ+K+ YIK D TK+
Sbjct: 31 LALHEASRECVWLRSVIQHIRETCGLSSGKMTSTIIYEDNAACIAQLKDGYIKGDRTKH 89
>KYP66820.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 165
Score = 88.2 bits (217), Expect = 4e-20
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = -2
Query: 178 LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKRDTTKY 2
LA HEASHEC WL+S IQ I++TCGLS GK+ +T++YEDN ACIAQ+K+ YIK D TK+
Sbjct: 65 LALHEASHECVWLRSVIQHIRKTCGLSSGKITSTVIYEDNDACIAQLKDGYIKGDRTKH 123
>KYP60345.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 200
Score = 88.2 bits (217), Expect = 8e-20
Identities = 55/136 (40%), Positives = 65/136 (47%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNV---------------------SKLGLMLSK------- 179
N +K + YL GT+DM L YSNV SK G + +
Sbjct: 3 NEVKQILRYLRGTIDMRLLYSNVPKPELNGYADAGYLSDPHNDKSKTGYLFTSGGTTISW 62
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HE S EC WL+S IQ IQET GLS GKM TI+YEDN AC
Sbjct: 63 RSVKQTISVTSSNHAEILALHETSRECVWLRSVIQHIQETRGLSSGKMTLTIIYEDNVAC 122
Query: 49 IAQVKEWYIKRDTTKY 2
I Q+K+ YIK D TK+
Sbjct: 123 ITQLKDGYIKGDKTKH 138
>KYP77194.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 177
Score = 86.7 bits (213), Expect = 2e-19
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = -2
Query: 178 LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKRDTTKY 2
LA HEAS EC WL+S IQ I+ETCGLS KM +TI+YEDN ACIAQ+K+ YIK D TK+
Sbjct: 52 LALHEASRECVWLRSVIQHIRETCGLSSSKMTSTIIYEDNAACIAQLKDGYIKGDRTKH 110
>KYP76714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 811
Score = 90.9 bits (224), Expect = 2e-19
Identities = 55/136 (40%), Positives = 67/136 (49%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSK---------------------LGLMLSK------- 179
NG+K + YL GTMDM L YSNVSK G + +
Sbjct: 634 NGVKQILRYLRGTMDMGLLYSNVSKPELNGYVDACYLSDPHNGKSQTGYLFTSGGTVISW 693
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS C WL+ IQ I+ETCGLS KM +T++YEDN AC
Sbjct: 694 RSVKQTISVTSSNHAEILALHEASRGCVWLRFVIQHIRETCGLSSRKMTSTVIYEDNAAC 753
Query: 49 IAQVKEWYIKRDTTKY 2
IAQ+K+ YIK D TK+
Sbjct: 754 IAQLKDEYIKGDRTKH 769
>KYP73413.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 152
Score = 85.5 bits (210), Expect = 3e-19
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = -2
Query: 178 LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKRDTTKY 2
LA HEAS EC WLKS IQ I+ETCGLS GKM + ++YEDN ACIAQ+K+ YI D TK+
Sbjct: 54 LALHEASRECVWLKSVIQHIRETCGLSSGKMTSIVIYEDNVACIAQLKDGYINGDITKH 112
>GAV87483.1 hypothetical protein CFOL_v3_30909 [Cephalotus follicularis]
Length = 248
Score = 83.6 bits (205), Expect = 1e-17
Identities = 52/125 (41%), Positives = 64/125 (51%), Gaps = 34/125 (27%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGLM--------------------LSK-------- 179
NGIKH+ YL G+ DM LFY +K L+ LS
Sbjct: 67 NGIKHIMRYLRGSTDMGLFYPRGTKTTLIGYADAGYLSDPHKADTTISWLSTKQTITTTS 126
Query: 178 ------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKR 17
LA HEAS EC WL+S IQ IQE+CGLS + T++YEDN ACI Q++ YIK
Sbjct: 127 SNHSEILAIHEASRECIWLRSMIQHIQESCGLSSIRNNPTVIYEDNDACITQLRGGYIKG 186
Query: 16 DTTKY 2
D TK+
Sbjct: 187 DRTKH 191
>GAV82615.1 hypothetical protein CFOL_v3_26066, partial [Cephalotus
follicularis]
Length = 184
Score = 82.0 bits (201), Expect = 1e-17
Identities = 51/133 (38%), Positives = 63/133 (47%), Gaps = 42/133 (31%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGLM------------------------------- 188
NGIKH+ YL G+ DM LFY +K L+
Sbjct: 25 NGIKHIMRYLRGSTDMGLFYPRGTKSTLIGYADAGYLSDPHKARSQTGYIFTFCDTAISW 84
Query: 187 -----------LSKLAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQ 41
+ A HEAS EC WL+S IQ IQE+CGLS K T++YEDNTACI Q
Sbjct: 85 RSTKQTMTATSSNHSAIHEASRECIWLRSMIQHIQESCGLSSIKNNPTVIYEDNTACITQ 144
Query: 40 VKEWYIKRDTTKY 2
++ YIK D TK+
Sbjct: 145 LRGGYIKGDRTKH 157
>GAV59369.1 hypothetical protein CFOL_v3_02900, partial [Cephalotus
follicularis]
Length = 218
Score = 82.4 bits (202), Expect = 2e-17
Identities = 52/136 (38%), Positives = 64/136 (47%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGLM------------------------------- 188
NGIKH+ YL G+ DM+LFY +K L+
Sbjct: 39 NGIKHIMRYLHGSTDMSLFYPRGTKSTLIGYADAGYLSDPHKARSQTGYIFTFCDTAISW 98
Query: 187 --------------LSKLAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
L LA HEAS EC WL+S IQ IQE+CGLS K T++YEDN AC
Sbjct: 99 RSTKQTMTVTSSNHLEILAIHEASRECIWLRSMIQHIQESCGLSSIKNNPTVIYEDNAAC 158
Query: 49 IAQVKEWYIKRDTTKY 2
I Q++ YIK D TK+
Sbjct: 159 ITQLRGGYIKGDRTKH 174
>ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 82.8 bits (203), Expect = 4e-17
Identities = 53/135 (39%), Positives = 64/135 (47%), Gaps = 45/135 (33%)
Frame = -2
Query: 271 GIKHMFCYLLGTMDMNLFYSNV---------------------SKLGLMLSK-------- 179
GIKH+ YL GT+D LFYSN S+ G + +
Sbjct: 90 GIKHILRYLQGTIDKGLFYSNNCGSQLIGYADAGYLSDPHKARSQTGYLFTCGDTAISWR 149
Query: 178 ----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACI 47
LA HEAS EC WL+S Q I+ TCGL+ K + TILYEDN ACI
Sbjct: 150 STKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCGLTSNKEVPTILYEDNAACI 209
Query: 46 AQVKEWYIKRDTTKY 2
AQ+K YIK D TK+
Sbjct: 210 AQLKGGYIKGDRTKH 224
>GAV58787.1 hypothetical protein CFOL_v3_02320, partial [Cephalotus
follicularis]
Length = 231
Score = 81.3 bits (199), Expect = 7e-17
Identities = 50/136 (36%), Positives = 63/136 (46%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGLML------------------------------ 185
NGIKH+ YL G+ DM LFY +K L++
Sbjct: 39 NGIKHIMRYLRGSTDMGLFYPRGTKSTLIVYADAGYLSDPHKARSQTGYVFTFCDTAISW 98
Query: 184 ---------------SKLAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+S IQ IQE+CGLS + T++YEDN AC
Sbjct: 99 RSTKQTMTATSSNHSETLAIHEASRECIWLRSMIQHIQESCGLSSIRNNPTVIYEDNAAC 158
Query: 49 IAQVKEWYIKRDTTKY 2
I Q++ YIK D TK+
Sbjct: 159 ITQLRGGYIKSDRTKH 174
>GAV58988.1 hypothetical protein CFOL_v3_02521, partial [Cephalotus
follicularis]
Length = 231
Score = 79.7 bits (195), Expect = 3e-16
Identities = 53/136 (38%), Positives = 64/136 (47%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGLM-------LSK--------------------- 179
NGIKH+ YL G+ DM LFY +K L+ LS
Sbjct: 39 NGIKHIMRYLRGSTDMGLFYPRGTKSTLIGYADAGYLSDPHKARSQTGYLFTFCDTAISW 98
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL+S IQ IQE+CGLS + TI+YEDN AC
Sbjct: 99 RSTKQTMTATSSNHSEILAIHEASRECIWLRSMIQHIQESCGLSSIRNNPTIIYEDNAAC 158
Query: 49 IAQVKEWYIKRDTTKY 2
I Q++ YIK D TK+
Sbjct: 159 ITQLRGGYIKGDRTKH 174
>GAV76564.1 hypothetical protein CFOL_v3_20037, partial [Cephalotus
follicularis]
Length = 223
Score = 79.3 bits (194), Expect = 3e-16
Identities = 53/136 (38%), Positives = 64/136 (47%), Gaps = 45/136 (33%)
Frame = -2
Query: 274 NGIKHMFCYLLGTMDMNLFYSNVSKLGLM-------LSK--------------------- 179
NGIKH+ YL G+ DM LFY +K L+ LS
Sbjct: 35 NGIKHIMRYLRGSTDMGLFYPRGTKSTLIGYVDAGYLSDPHKARSQTGYLFTFCDTAISW 94
Query: 178 -----------------LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTAC 50
LA HEAS EC WL S IQ IQE+CGLS + T++YEDNTAC
Sbjct: 95 RSTKQTMTATSSNHSEILAIHEASRECIWLISMIQHIQESCGLSSIRNNPTVIYEDNTAC 154
Query: 49 IAQVKEWYIKRDTTKY 2
I Q++ YIK D TK+
Sbjct: 155 ITQLRGGYIKGDRTKH 170
>GAV85204.1 hypothetical protein CFOL_v3_28642, partial [Cephalotus
follicularis]
Length = 150
Score = 77.0 bits (188), Expect = 6e-16
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -2
Query: 178 LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKRDTTKY 2
LA HEAS EC WL+S IQ IQE+CGLS + T++YEDN ACI Q++E YIK D TK+
Sbjct: 48 LAIHEASRECIWLRSIIQHIQESCGLSSIRNNPTVIYEDNAACITQLREGYIKGDRTKH 106
>CAN61870.1 hypothetical protein VITISV_002413 [Vitis vinifera]
Length = 713
Score = 80.9 bits (198), Expect = 7e-16
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = -2
Query: 178 LAPHEASHECTWLKSTIQDIQETCGLSFGKMIATILYEDNTACIAQVKEWYIKRDTTKY 2
LA HEASHEC WL+S IQ IQETCGL + AT+L+EDN ACIAQ+K +IK D TKY
Sbjct: 228 LAIHEASHECVWLRSMIQHIQETCGLPSIRDNATMLHEDNVACIAQIKGGFIKGDRTKY 286