BLASTX nr result

ID: Glycyrrhiza28_contig00026814 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00026814
         (202 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    81   7e-19
AGC78957.1 hypothetical protein (mitochondrion) [Vicia faba]           82   8e-19
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    81   1e-18
CDM82313.1 unnamed protein product [Triticum aestivum]                 64   3e-13
XP_006401947.1 hypothetical protein EUTSA_v10015949mg, partial [...    66   2e-11
CDM81530.1 unnamed protein product [Triticum aestivum]                 60   3e-11
CDM87129.1 unnamed protein product [Triticum aestivum]                 58   2e-10
XP_013442821.1 hypothetical protein MTR_0082s0050 [Medicago trun...    56   1e-07

>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score = 80.9 bits (198), Expect(2) = 7e-19
 Identities = 38/52 (73%), Positives = 39/52 (75%)
 Frame = +2

Query: 47   QNQSPGWLVSLVIGDYLAWFGEHLLG*RFFCC*MLRPKC*TIDSTCLDGCLP 202
            +N SPGWLVSLVIGDYLAWFGEHLLG R   C ML P C TI  TC DGC P
Sbjct: 2920 KNLSPGWLVSLVIGDYLAWFGEHLLGLRLVFCLMLWPLCSTIHPTCSDGCSP 2971



 Score = 40.0 bits (92), Expect(2) = 7e-19
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +3

Query: 3    GWKQSLWF*YPVGIIRIKVQVGW 71
            GWKQSLWF YPV IIR  +  GW
Sbjct: 2904 GWKQSLWFSYPVSIIRKNLSPGW 2926


>AGC78957.1 hypothetical protein (mitochondrion) [Vicia faba]
          Length = 106

 Score = 82.0 bits (201), Expect = 8e-19
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   WLETILMVLISGRNNQNQSPGWLVSLVIGDYLAWFGEHLLG 124
           W ++ LMVLISGRNNQN+SPGWLVSLVIGDYLAWFGEHLLG
Sbjct: 66  WKQSFLMVLISGRNNQNKSPGWLVSLVIGDYLAWFGEHLLG 106


>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score = 80.9 bits (198), Expect(2) = 1e-18
 Identities = 38/52 (73%), Positives = 39/52 (75%)
 Frame = +2

Query: 47   QNQSPGWLVSLVIGDYLAWFGEHLLG*RFFCC*MLRPKC*TIDSTCLDGCLP 202
            +N SPGWLVSLVIGDYLAWFGEHLLG R   C ML P C TI  TC DGC P
Sbjct: 2920 KNLSPGWLVSLVIGDYLAWFGEHLLGLRLVFCLMLWPLCSTIHPTCSDGCSP 2971



 Score = 39.3 bits (90), Expect(2) = 1e-18
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +3

Query: 3    GWKQSLWF*YPVGIIRIKVQVGW 71
            GWKQSLWF YPV IIR  +  GW
Sbjct: 2904 GWKQSLWFSYPVTIIRKNLSPGW 2926


>CDM82313.1 unnamed protein product [Triticum aestivum]
          Length = 64

 Score = 63.9 bits (154), Expect(2) = 3e-13
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +2

Query: 47  QNQSPGWLVSLVIGDYLAWFGEHLLG*RFFCC 142
           +NQSPGWLVSLVIGDYLAWFGEHLLG RF  C
Sbjct: 33  KNQSPGWLVSLVIGDYLAWFGEHLLGFRFVFC 64



 Score = 38.1 bits (87), Expect(2) = 3e-13
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +3

Query: 3  GWKQSLWF*YPVGIIRIKVQVGW 71
          GWKQSLWF YPV IIR     GW
Sbjct: 17 GWKQSLWFLYPVRIIRKNQSPGW 39


>XP_006401947.1 hypothetical protein EUTSA_v10015949mg, partial [Eutrema
           salsugineum] ESQ43400.1 hypothetical protein
           EUTSA_v10015949mg, partial [Eutrema salsugineum]
          Length = 251

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +2

Query: 2   WLETILMVLISGRNNQNQSPGWLVSLVIGDYLAWFGEHLL 121
           WLETILMVLISGRNN+NQSPG LVSLVIGDYLA     LL
Sbjct: 181 WLETILMVLISGRNNKNQSPGRLVSLVIGDYLACLNAELL 220


>CDM81530.1 unnamed protein product [Triticum aestivum]
          Length = 64

 Score = 60.5 bits (145), Expect(2) = 3e-11
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +2

Query: 47  QNQSPGWLVSLVIGDYLAWFGEHLLG*RFFCC 142
           +NQSP WLVSLVIGDYLAWFGEHLLG RF  C
Sbjct: 33  KNQSPCWLVSLVIGDYLAWFGEHLLGFRFVFC 64



 Score = 34.7 bits (78), Expect(2) = 3e-11
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = +3

Query: 3  GWKQSLWF*YPVGIIRIKVQVGW 71
          GWKQSLWF YPV IIR      W
Sbjct: 17 GWKQSLWFLYPVRIIRKNQSPCW 39


>CDM87129.1 unnamed protein product [Triticum aestivum]
          Length = 52

 Score = 57.8 bits (138), Expect(2) = 2e-10
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +2

Query: 47  QNQSPGWLVSLVIGDYLAWFGEHLLG*RFFCC 142
           +NQSP WLVSLVIG YLAWFGEHLLG RF  C
Sbjct: 21  KNQSPCWLVSLVIGHYLAWFGEHLLGFRFVFC 52



 Score = 34.7 bits (78), Expect(2) = 2e-10
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = +3

Query: 3  GWKQSLWF*YPVGIIRIKVQVGW 71
          GWKQSLWF YPV IIR      W
Sbjct: 5  GWKQSLWFLYPVRIIRKNQSPCW 27


>XP_013442821.1 hypothetical protein MTR_0082s0050 [Medicago truncatula] KEH16846.1
           hypothetical protein MTR_0082s0050 [Medicago truncatula]
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 50  NQSPGWLVSLVIGDYLAWFGEHLL 121
           NQSPGWLVSLVIGDYLAWFGEHLL
Sbjct: 291 NQSPGWLVSLVIGDYLAWFGEHLL 314


Top