BLASTX nr result
ID: Glycyrrhiza28_contig00026710
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00026710
(287 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_006023182.1 MULTISPECIES: conjugal transfer protein TrbA [Rhi... 105 1e-24
WP_004448214.1 MULTISPECIES: conjugal transfer protein TrbA [Met... 102 2e-23
WP_014891370.1 conjugal transfer protein TrbA [Methylocystis sp.... 102 2e-23
WP_024880265.1 conjugal transfer protein TraA [Methylosinus sp. ... 102 2e-23
WP_024880391.1 conjugal transfer protein TraA [Methylosinus sp. ... 102 2e-23
WP_026606167.1 conjugal transfer protein TraA [Methylocapsa acid... 96 5e-21
WP_074821987.1 Ti-type conjugative transfer relaxase TraA [Brady... 96 6e-21
SDI63766.1 plasmid mobilization system relaxase [Bradyrhizobium ... 96 6e-21
WP_012046228.1 MULTISPECIES: conjugal transfer protein TrbA [Bra... 94 2e-20
WP_012040773.1 conjugal transfer protein TrbA [Bradyrhizobium sp... 93 4e-20
OJU33654.1 Ti-type conjugative transfer relaxase TraA [Alphaprot... 93 5e-20
WP_028345498.1 conjugal transfer protein TraA [Bradyrhizobium el... 93 5e-20
WP_057196835.1 conjugal transfer protein TraA [Bradyrhizobium sp... 93 5e-20
OJU44864.1 Ti-type conjugative transfer relaxase TraA [Alphaprot... 92 7e-20
WP_028347570.1 conjugal transfer protein TraA [Bradyrhizobium el... 92 7e-20
WP_065746072.1 Ti-type conjugative transfer relaxase TraA [Brady... 92 7e-20
WP_063112038.1 conjugal transfer protein TraA [Methylobacterium ... 91 2e-19
WP_041799829.1 conjugal transfer protein TraA [Rhodopseudomonas ... 91 3e-19
WP_011662472.1 conjugal transfer protein TrbA [Rhodopseudomonas ... 91 3e-19
ABJ07193.1 MobA/MobL protein [Rhodopseudomonas palustris BisA53] 91 3e-19
>WP_006023182.1 MULTISPECIES: conjugal transfer protein TrbA [Rhizobiales] ABS65530.1
Ti-type conjugative transfer relaxase TraA [Xanthobacter
autotrophicus Py2] ABS67894.1 Ti-type conjugative
transfer relaxase TraA [Xanthobacter autotrophicus Py2]
EKS34571.1 Ti-type conjugative transfer relaxase TraA
[Afipia broomeae ATCC 49717]
Length = 976
Score = 105 bits (263), Expect = 1e-24
Identities = 53/65 (81%), Positives = 53/65 (81%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFEEVRPHGSHDAEAAYKKSPELASE LQLETELRTDPQRRADRF
Sbjct: 833 EARKVFEEVRPHGSHDAEAAYKKSPELASEAATGRTARAIRALQLETELRTDPQRRADRF 892
Query: 198 VERWR 212
VERWR
Sbjct: 893 VERWR 897
>WP_004448214.1 MULTISPECIES: conjugal transfer protein TrbA [Methylosinus]
OBS53723.1 Ti-type conjugative transfer relaxase TraA
[Methylosinus sp. 3S-1]
Length = 971
Score = 102 bits (254), Expect = 2e-23
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFEEVRP+GSHDAEAAYKK+PELASE LQLETELRTDPQRRADRF
Sbjct: 828 EARKVFEEVRPYGSHDAEAAYKKNPELASEVATGRTARAIRALQLETELRTDPQRRADRF 887
Query: 198 VERWR 212
VERWR
Sbjct: 888 VERWR 892
>WP_014891370.1 conjugal transfer protein TrbA [Methylocystis sp. SC2] CCJ07341.1
Ti-type conjugative transfer relaxase TraA [Methylocystis
sp. SC2]
Length = 974
Score = 102 bits (254), Expect = 2e-23
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFEEVRP+GSHDAEAAYKK+PELASE LQLETELRTDPQRRADRF
Sbjct: 831 EARKVFEEVRPYGSHDAEAAYKKNPELASEAATGRTARAIRALQLETELRTDPQRRADRF 890
Query: 198 VERWR 212
VERWR
Sbjct: 891 VERWR 895
>WP_024880265.1 conjugal transfer protein TraA [Methylosinus sp. LW3]
Length = 977
Score = 102 bits (254), Expect = 2e-23
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFEEVRP+GSHDAEAAYKK+PELASE LQLETELRTDPQRRADRF
Sbjct: 834 EARKVFEEVRPYGSHDAEAAYKKNPELASEAATGRTARAIRALQLETELRTDPQRRADRF 893
Query: 198 VERWR 212
VERWR
Sbjct: 894 VERWR 898
>WP_024880391.1 conjugal transfer protein TraA [Methylosinus sp. LW3]
Length = 978
Score = 102 bits (254), Expect = 2e-23
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFEEVRP+GSHDAEAAYKK+PELASE LQLETELRTDPQRRADRF
Sbjct: 833 EARKVFEEVRPYGSHDAEAAYKKNPELASEAATGRTARAIRALQLETELRTDPQRRADRF 892
Query: 198 VERWR 212
VERWR
Sbjct: 893 VERWR 897
>WP_026606167.1 conjugal transfer protein TraA [Methylocapsa acidiphila]
Length = 976
Score = 95.9 bits (237), Expect = 5e-21
Identities = 48/65 (73%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
+ARK FEEVRP+G HDAEAAYKKSPELASE LQLETELRTDPQ RADRF
Sbjct: 833 DARKAFEEVRPYGPHDAEAAYKKSPELASEAATGQVNRTVRALQLETELRTDPQIRADRF 892
Query: 198 VERWR 212
VERWR
Sbjct: 893 VERWR 897
>WP_074821987.1 Ti-type conjugative transfer relaxase TraA [Bradyrhizobium lablabi]
Length = 986
Score = 95.5 bits (236), Expect = 6e-21
Identities = 48/65 (73%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFE VRPHGSHDAEAAYKK+PELA E LQLETELRTDP RRADRF
Sbjct: 843 EARKVFEGVRPHGSHDAEAAYKKNPELALEAASGNPARAIRALQLETELRTDPGRRADRF 902
Query: 198 VERWR 212
VERW+
Sbjct: 903 VERWQ 907
>SDI63766.1 plasmid mobilization system relaxase [Bradyrhizobium ottawaense]
SED33750.1 plasmid mobilization system relaxase
[Bradyrhizobium lablabi]
Length = 1018
Score = 95.5 bits (236), Expect = 6e-21
Identities = 48/65 (73%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFE VRPHGSHDAEAAYKK+PELA E LQLETELRTDP RRADRF
Sbjct: 875 EARKVFEGVRPHGSHDAEAAYKKNPELALEAASGNPARAIRALQLETELRTDPGRRADRF 934
Query: 198 VERWR 212
VERW+
Sbjct: 935 VERWQ 939
>WP_012046228.1 MULTISPECIES: conjugal transfer protein TrbA [Bradyrhizobium]
ABQ38287.1 plasmid mobilization system relaxase
[Bradyrhizobium sp. BTAi1] KQT23522.1 conjugal transfer
protein TraA [Bradyrhizobium sp. Leaf396]
Length = 982
Score = 94.4 bits (233), Expect = 2e-20
Identities = 47/65 (72%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFE VRP+GSHDAEAAYKK+PELA E LQLETELRTDP RRADRF
Sbjct: 839 EARKVFEGVRPYGSHDAEAAYKKNPELAREAAGGQVNRAIRALQLETELRTDPSRRADRF 898
Query: 198 VERWR 212
VERW+
Sbjct: 899 VERWQ 903
>WP_012040773.1 conjugal transfer protein TrbA [Bradyrhizobium sp. BTAi1] ABQ32721.1
plasmid mobilization system relaxase [Bradyrhizobium sp.
BTAi1] CEJ12904.1 Mobilization protein A [bacterium
YEK0313]
Length = 968
Score = 93.2 bits (230), Expect = 4e-20
Identities = 46/65 (70%), Positives = 51/65 (78%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EAR+ FEEVRP+GSHDAEAAYKK+PELA+E LQLETELRT+P RRADRF
Sbjct: 827 EARQRFEEVRPYGSHDAEAAYKKNPELAAEAALGDARRAIRALQLETELRTEPARRADRF 886
Query: 198 VERWR 212
VERWR
Sbjct: 887 VERWR 891
>OJU33654.1 Ti-type conjugative transfer relaxase TraA [Alphaproteobacteria
bacterium 65-37]
Length = 970
Score = 92.8 bits (229), Expect = 5e-20
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EAR+ FEEVRPHG HDAEAAYKK+PELA+E LQLETELRTDP RADRF
Sbjct: 827 EARQRFEEVRPHGPHDAEAAYKKNPELAAEAASGDARRAIRALQLETELRTDPSLRADRF 886
Query: 198 VERWR 212
VERWR
Sbjct: 887 VERWR 891
>WP_028345498.1 conjugal transfer protein TraA [Bradyrhizobium elkanii]
Length = 983
Score = 92.8 bits (229), Expect = 5e-20
Identities = 46/65 (70%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFE+VRP GSHDAEAAYKK+PELA E LQLETELRT+P RRADRF
Sbjct: 840 EARKVFEDVRPFGSHDAEAAYKKNPELAREAASGNSGRAIRALQLETELRTNPSRRADRF 899
Query: 198 VERWR 212
VERW+
Sbjct: 900 VERWQ 904
>WP_057196835.1 conjugal transfer protein TraA [Bradyrhizobium sp. Leaf396]
KQT20423.1 conjugal transfer protein TraA [Bradyrhizobium
sp. Leaf396]
Length = 987
Score = 92.8 bits (229), Expect = 5e-20
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARKVFE+VRP+GSHDAEAAYKK+PEL E LQLETEL+TDP RRADRF
Sbjct: 844 EARKVFEQVRPYGSHDAEAAYKKNPELVREAAGGQVNRAIRALQLETELQTDPSRRADRF 903
Query: 198 VERWR 212
VERW+
Sbjct: 904 VERWQ 908
>OJU44864.1 Ti-type conjugative transfer relaxase TraA [Alphaproteobacteria
bacterium 65-37]
Length = 979
Score = 92.4 bits (228), Expect = 7e-20
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
E+R FEEVRP+G HDAEAAYKK+PELASE LQLETELRTDPQ RADRF
Sbjct: 836 ESRAAFEEVRPYGPHDAEAAYKKNPELASEAATEQVNRTIRALQLETELRTDPQIRADRF 895
Query: 198 VERWR 212
VERWR
Sbjct: 896 VERWR 900
>WP_028347570.1 conjugal transfer protein TraA [Bradyrhizobium elkanii]
Length = 983
Score = 92.4 bits (228), Expect = 7e-20
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
+ARKVF EVRPHGSHDAEAAYKK+PELA E LQLETELRTDP RRA RF
Sbjct: 840 QARKVFVEVRPHGSHDAEAAYKKNPELALEAASGNSARAVRALQLETELRTDPSRRAGRF 899
Query: 198 VERWR 212
VERW+
Sbjct: 900 VERWQ 904
>WP_065746072.1 Ti-type conjugative transfer relaxase TraA [Bradyrhizobium sp. LMTR
3] OCK58749.1 Ti-type conjugative transfer relaxase TraA
[Bradyrhizobium sp. LMTR 3]
Length = 987
Score = 92.4 bits (228), Expect = 7e-20
Identities = 45/65 (69%), Positives = 51/65 (78%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
E+RKVFEEVRP+GSHDAEAAYKK+PELA E LQLETELRT+P RRADRF
Sbjct: 844 ESRKVFEEVRPYGSHDAEAAYKKNPELALEAASGNSARAIRALQLETELRTNPSRRADRF 903
Query: 198 VERWR 212
V+RW+
Sbjct: 904 VQRWQ 908
>WP_063112038.1 conjugal transfer protein TraA [Methylobacterium sp. CCH5-D2]
KZB97306.1 Mobilization protein A [Methylobacterium
radiotolerans]
Length = 971
Score = 91.3 bits (225), Expect = 2e-19
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EAR+ FEEVRPHGSHDAEAAYKK+P+LA+E LQLETELRTDP RADRF
Sbjct: 830 EARQRFEEVRPHGSHDAEAAYKKNPQLAAEAASGDARRAIHALQLETELRTDPGLRADRF 889
Query: 198 VERWR 212
VERW+
Sbjct: 890 VERWQ 894
>WP_041799829.1 conjugal transfer protein TraA [Rhodopseudomonas palustris]
Length = 1006
Score = 90.9 bits (224), Expect = 3e-19
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARK FEEVRP+GSHDAEAAYK +PELA + LQLETELRTDP RRADRF
Sbjct: 863 EARKEFEEVRPYGSHDAEAAYKTNPELAEQAASGNPARAIRALQLETELRTDPARRADRF 922
Query: 198 VERW 209
VERW
Sbjct: 923 VERW 926
>WP_011662472.1 conjugal transfer protein TrbA [Rhodopseudomonas palustris]
ABJ04981.1 MobA/MobL protein [Rhodopseudomonas palustris
BisA53]
Length = 1006
Score = 90.9 bits (224), Expect = 3e-19
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARK FEEVRP+GSHDAEAAYK +PELA + LQLETELRTDP RRADRF
Sbjct: 863 EARKEFEEVRPYGSHDAEAAYKTNPELAGQAASGNPARAIRALQLETELRTDPARRADRF 922
Query: 198 VERW 209
VERW
Sbjct: 923 VERW 926
>ABJ07193.1 MobA/MobL protein [Rhodopseudomonas palustris BisA53]
Length = 1038
Score = 90.9 bits (224), Expect = 3e-19
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +3
Query: 18 EARKVFEEVRPHGSHDAEAAYKKSPELASEXXXXXXXXXXXXLQLETELRTDPQRRADRF 197
EARK FEEVRP+GSHDAEAAYK +PELA + LQLETELRTDP RRADRF
Sbjct: 895 EARKEFEEVRPYGSHDAEAAYKTNPELAEQAASGNPARAIRALQLETELRTDPARRADRF 954
Query: 198 VERW 209
VERW
Sbjct: 955 VERW 958