BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00026587
         (349 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDX74703.1 BnaA05g04490D [Brassica napus]                              54   7e-06
XP_009143093.1 PREDICTED: nuclear pore complex protein NUP62 [Br...    54   7e-06

>CDX74703.1 BnaA05g04490D [Brassica napus]
          Length = 736

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 33/86 (38%), Positives = 44/86 (51%)
 Frame = -3

Query: 260 TTTSFTGFGAQGGTPSFS*TSFIGSETQGGCPSIS*SLFKGYGAQDGSPFSSRTSFTGFG 81
           TT SF GFGA    P+ S T   G       P+ S +   G+GA   +P +S T   GFG
Sbjct: 77  TTPSF-GFGANASAPAASTTPSFGFGATSSAPTASTTPSFGFGATSSAPTASTTPSFGFG 135

Query: 80  AQGGSPSSS*TSLIGFGTEGASLSSS 3
           A   +P+SS T   GFG   ++ +SS
Sbjct: 136 ATSSAPASSTTPSFGFGATSSAPASS 161


>XP_009143093.1 PREDICTED: nuclear pore complex protein NUP62 [Brassica rapa]
           XP_013747964.1 PREDICTED: nuclear pore complex protein
           NUP62-like [Brassica napus]
          Length = 784

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/85 (37%), Positives = 44/85 (51%)
 Frame = -3

Query: 260 TTTSFTGFGAQGGTPSFS*TSFIGSETQGGCPSIS*SLFKGYGAQDGSPFSSRTSFTGFG 81
           TT SF GFGA    P+ S T   G       P+ S +   G+GA   +P SS T   GFG
Sbjct: 77  TTLSF-GFGANASAPAASTTPSFGFGATSSAPTASTTPSFGFGATSSAPASSTTPSFGFG 135

Query: 80  AQGGSPSSS*TSLIGFGTEGASLSS 6
           A   +P+SS T   GFG   +++++
Sbjct: 136 ATSSAPASSTTPSFGFGATASTVTA 160