BLASTX nr result
ID: Glycyrrhiza28_contig00026580
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00026580
(621 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AGC78950.1 hypothetical protein (mitochondrion) [Vicia faba] 220 3e-70
XP_016652446.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-li... 86 6e-16
XP_017985381.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-li... 80 8e-15
YP_009315943.1 RNA polymerase (mitochondrion) [Cocos nucifera] A... 76 2e-13
KVD98158.1 DNA-directed DNA polymerase, family B, conserved site... 75 3e-13
CDP17423.1 unnamed protein product [Coffea canephora] 73 2e-12
KVG76489.1 hypothetical protein Ccrd_026218 [Cynara cardunculus ... 75 2e-12
NP_064087.1 orf290 gene product (mitochondrion) [Beta vulgaris s... 74 3e-12
CBJ14059.1 hypothetical protein (mitochondrion) [Beta vulgaris s... 74 3e-12
XP_002449503.1 hypothetical protein SORBIDRAFT_05g016830 [Sorghu... 55 4e-12
CBJ20750.1 hypothetical protein (mitochondrion) [Beta vulgaris s... 74 6e-12
YP_004222326.1 hypothetical protein BevumaM_p091 (mitochondrion)... 74 7e-12
CBJ14058.1 hypothetical protein (mitochondrion) [Beta vulgaris s... 74 7e-12
BAD66793.1 orf496 (mitochondrion) [Beta vulgaris subsp. vulgaris] 74 7e-12
XP_004301760.1 PREDICTED: uncharacterized protein LOC101309743 [... 65 1e-11
OMP00902.1 hypothetical protein CCACVL1_03259 [Corchorus capsula... 49 5e-11
XP_016648309.1 PREDICTED: uncharacterized protein LOC103327103 [... 56 8e-11
ABA93861.2 retrotransposon protein, putative, unclassified [Oryz... 52 2e-10
XP_005315459.1 PREDICTED: uncharacterized protein LOC101938643, ... 51 2e-10
OMO69434.1 hypothetical protein CCACVL1_19513 [Corchorus capsula... 51 3e-10
>AGC78950.1 hypothetical protein (mitochondrion) [Vicia faba]
Length = 179
Score = 220 bits (561), Expect = 3e-70
Identities = 102/106 (96%), Positives = 102/106 (96%)
Frame = -1
Query: 387 SRAHGFVKMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRYRLSASRLPSYTRLSSLGHFE 208
S AHGFVKMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRYRLSASRLPSYTRLSSLGHFE
Sbjct: 74 SGAHGFVKMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRYRLSASRLPSYTRLSSLGHFE 133
Query: 207 VGPRNSELIFADMLSENTSQPQYQDGLRLLEPELCCTTSCCDHCLS 70
VGPRNSELIFADMLSENTSQPQYQDGLR EPELCCTTSCCDH LS
Sbjct: 134 VGPRNSELIFADMLSENTSQPQYQDGLRFCEPELCCTTSCCDHSLS 179
>XP_016652446.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-like [Prunus mume]
Length = 831
Score = 85.9 bits (211), Expect = 6e-16
Identities = 43/49 (87%), Positives = 45/49 (91%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
NT+ GSDYWN +NSAVQLAAAITASARIYM PYISREDCYYTDTDSVV
Sbjct: 647 NTEKGSDYWNPPKNSAVQLAAAITASARIYMYPYISREDCYYTDTDSVV 695
>XP_017985381.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-like [Theobroma
cacao]
Length = 687
Score = 80.5 bits (197), Expect(2) = 8e-15
Identities = 41/49 (83%), Positives = 42/49 (85%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
NT DYWN +NSAVQLAAAITASARIYM PYISREDCYYTDTDSVV
Sbjct: 446 NTGKDEDYWNPPKNSAVQLAAAITASARIYMYPYISREDCYYTDTDSVV 494
Score = 27.3 bits (59), Expect(2) = 8e-15
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 198 RNSELIFADMLSEN 157
R+SELIF DMLSEN
Sbjct: 424 RHSELIFGDMLSEN 437
>YP_009315943.1 RNA polymerase (mitochondrion) [Cocos nucifera] AOX12937.1 RNA
polymerase (mitochondrion) [Cocos nucifera]
Length = 709
Score = 76.3 bits (186), Expect(2) = 2e-13
Identities = 39/45 (86%), Positives = 40/45 (88%), Gaps = 2/45 (4%)
Frame = -2
Query: 131 GSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
GSDYWN + SAVQLAAAITA ARIYM PYISREDCYYTDTDSVV
Sbjct: 494 GSDYWNPPKISAVQLAAAITACARIYMYPYISREDCYYTDTDSVV 538
Score = 26.6 bits (57), Expect(2) = 2e-13
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 267 RLSASRLPSYTRLSSLGHFEVGPRNSELIFADMLSENTSQPQYQDG 130
R + + + T + S + RNS+LIFAD L+E Y G
Sbjct: 447 RFGINPVTTVTEVCSQDRYNFLIRNSDLIFADQLNEKYYIVSYWSG 492
>KVD98158.1 DNA-directed DNA polymerase, family B, conserved site-containing
protein [Cynara cardunculus var. scolymus]
Length = 203
Score = 75.1 bits (183), Expect = 3e-13
Identities = 44/69 (63%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
Frame = -2
Query: 191 VS*YSLICLARILRSRNTKM----GSDYWNQ--NSAVQLAAAITASARIYM*PYISREDC 30
+S Y++I LAR S T DYWN NSAVQLAAAITA+ARIYM PYISRED
Sbjct: 1 MSLYTVISLARTATSYPTMSIQGKDEDYWNPPTNSAVQLAAAITANARIYMYPYISREDS 60
Query: 29 YYTDTDSVV 3
YYT+TDSVV
Sbjct: 61 YYTBTDSVV 69
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2
Query: 104 AVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
AVQLAAAIT+ ARIYM PYISRED YYTDTDSVV
Sbjct: 85 AVQLAAAITSYARIYMYPYISREDSYYTDTDSVV 118
>CDP17423.1 unnamed protein product [Coffea canephora]
Length = 357
Score = 72.8 bits (177), Expect(2) = 2e-12
Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
NT SD+WN + SAVQLAAAITA+ARI+M PYISR+DCYYTDTDSVV
Sbjct: 175 NTGTDSDFWNPPKISAVQLAAAITANARIHMYPYISRDDCYYTDTDSVV 223
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 198 RNSELIFADMLSEN 157
R+SELIF DMLSEN
Sbjct: 153 RHSELIFGDMLSEN 166
>KVG76489.1 hypothetical protein Ccrd_026218 [Cynara cardunculus var. scolymus]
Length = 340
Score = 74.7 bits (182), Expect = 2e-12
Identities = 39/49 (79%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWNQ--NSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
NT DYWN NSAVQLAAAITA+ARIYM PYISRED YYTDTDSVV
Sbjct: 147 NTGKDEDYWNPPTNSAVQLAAAITANARIYMYPYISREDSYYTDTDSVV 195
>NP_064087.1 orf290 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
YP_004222327.1 hypothetical protein BevumaM_p092
(mitochondrion) [Beta vulgaris subsp. maritima]
YP_004842133.1 hypothetical protein BemaM_p088
(mitochondrion) [Beta macrocarpa] BAA99480.1 orf290
(mitochondrion) [Beta vulgaris subsp. vulgaris]
CBJ17550.1 hypothetical protein (mitochondrion) [Beta
vulgaris subsp. maritima] CBX24937.1 hypothetical
protein (mitochondrion) [Beta macrocarpa] CBL51982.1
hypothetical protein (mitochondrion) [Beta vulgaris
subsp. maritima]
Length = 290
Score = 73.9 bits (180), Expect = 3e-12
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
N + G D W+ QNSAV LAAAITASARIYM P+ISREDCYYTDTDSVV
Sbjct: 24 NMEEGEDRWDPPQNSAVYLAAAITASARIYMYPFISREDCYYTDTDSVV 72
>CBJ14059.1 hypothetical protein (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 290
Score = 73.9 bits (180), Expect = 3e-12
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
N + G D W+ QNSAV LAAAITASARIYM P+ISREDCYYTDTDSVV
Sbjct: 24 NMEEGEDRWDPPQNSAVYLAAAITASARIYMYPFISREDCYYTDTDSVV 72
>XP_002449503.1 hypothetical protein SORBIDRAFT_05g016830 [Sorghum bicolor]
Length = 794
Score = 55.5 bits (132), Expect(2) = 4e-12
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = -1
Query: 366 KMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRY 268
KM+W+IRR+G+YWPT+L DC + K C CQ++
Sbjct: 551 KMKWMIRRNGYYWPTILEDCFKYFKGCQVCQKF 583
Score = 43.1 bits (100), Expect(2) = 4e-12
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3
Query: 262 QRKPASELYPIIKPWPFRGWA 200
QR PAS + PIIKPWPFRGWA
Sbjct: 587 QRAPASAMNPIIKPWPFRGWA 607
>CBJ20750.1 hypothetical protein (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 435
Score = 73.9 bits (180), Expect = 6e-12
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
N + G D W+ QNSAV LAAAITASARIYM P+ISREDCYYTDTDSVV
Sbjct: 230 NMEEGEDRWDPPQNSAVYLAAAITASARIYMYPFISREDCYYTDTDSVV 278
>YP_004222326.1 hypothetical protein BevumaM_p091 (mitochondrion) [Beta vulgaris
subsp. maritima] XP_019107656.1 PREDICTED:
uncharacterized protein LOC109136226 [Beta vulgaris
subsp. vulgaris] CBJ17549.1 hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 496
Score = 73.9 bits (180), Expect = 7e-12
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
N + G D W+ QNSAV LAAAITASARIYM P+ISREDCYYTDTDSVV
Sbjct: 230 NMEEGEDRWDPPQNSAVYLAAAITASARIYMYPFISREDCYYTDTDSVV 278
>CBJ14058.1 hypothetical protein (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 496
Score = 73.9 bits (180), Expect = 7e-12
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
N + G D W+ QNSAV LAAAITASARIYM P+ISREDCYYTDTDSVV
Sbjct: 230 NMEEGEDRWDPPQNSAVYLAAAITASARIYMYPFISREDCYYTDTDSVV 278
>BAD66793.1 orf496 (mitochondrion) [Beta vulgaris subsp. vulgaris]
Length = 496
Score = 73.9 bits (180), Expect = 7e-12
Identities = 38/49 (77%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = -2
Query: 143 NTKMGSDYWN--QNSAVQLAAAITASARIYM*PYISREDCYYTDTDSVV 3
N + G D W+ QNSAV LAAAITASARIYM P+ISREDCYYTDTDSVV
Sbjct: 230 NMEEGEDRWDPPQNSAVYLAAAITASARIYMYPFISREDCYYTDTDSVV 278
>XP_004301760.1 PREDICTED: uncharacterized protein LOC101309743 [Fragaria vesca
subsp. vesca]
Length = 553
Score = 65.1 bits (157), Expect(2) = 1e-11
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1
Query: 366 KMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRYRL 262
KMRWLIRRHG+YWPT+L DCIA AK C CQ Y L
Sbjct: 341 KMRWLIRRHGYYWPTILKDCIAFAKGCQDCQAYGL 375
Score = 32.0 bits (71), Expect(2) = 1e-11
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3
Query: 241 LYPIIKPWPFRGWA 200
L PIIKPWP RGWA
Sbjct: 384 LQPIIKPWPGRGWA 397
>OMP00902.1 hypothetical protein CCACVL1_03259 [Corchorus capsularis]
Length = 79
Score = 48.9 bits (115), Expect(2) = 5e-11
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1
Query: 339 GHYWPTVLSDCIAHAKSCDACQR 271
GHYWPT S+CIAH KSCDACQR
Sbjct: 3 GHYWPTGPSNCIAHGKSCDACQR 25
Score = 46.2 bits (108), Expect(2) = 5e-11
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 262 QRKPASELYPIIKPWPFRG 206
QRKPASELYPIIKPWPFRG
Sbjct: 28 QRKPASELYPIIKPWPFRG 46
>XP_016648309.1 PREDICTED: uncharacterized protein LOC103327103 [Prunus mume]
Length = 754
Score = 55.8 bits (133), Expect(2) = 8e-11
Identities = 19/33 (57%), Positives = 29/33 (87%)
Frame = -1
Query: 366 KMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRY 268
KM WLIRR+G++WPT++ DCI ++K C++CQR+
Sbjct: 672 KMCWLIRRYGYFWPTMMKDCINYSKGCESCQRH 704
Score = 38.5 bits (88), Expect(2) = 8e-11
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 262 QRKPASELYPIIKPWPFRGWAQE 194
Q+ P+ + P++KPWPFRGWA +
Sbjct: 708 QQAPSVHMNPVVKPWPFRGWAMD 730
>ABA93861.2 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 533
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -1
Query: 366 KMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRY 268
KM+WL+RR G++WPT+L DC + K C CQ++
Sbjct: 285 KMKWLLRRVGYFWPTMLEDCFKYYKGCQGCQKF 317
Score = 41.6 bits (96), Expect(2) = 2e-10
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3
Query: 262 QRKPASELYPIIKPWPFRGW 203
QR PAS + PIIKPWPFRGW
Sbjct: 321 QRAPASAMNPIIKPWPFRGW 340
>XP_005315459.1 PREDICTED: uncharacterized protein LOC101938643, partial [Chrysemys
picta bellii]
Length = 266
Score = 50.8 bits (120), Expect(2) = 2e-10
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = -1
Query: 366 KMRWLIRRHGHYWPTVLSDCIAHAKSCDACQRY 268
KM+WL+RR G YWP++++DC + K C CQ++
Sbjct: 162 KMKWLLRRSGFYWPSMIADCFKYYKGCQVCQKF 194
Score = 42.0 bits (97), Expect(2) = 2e-10
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -3
Query: 262 QRKPASELYPIIKPWPFRGW 203
Q PA+EL+PIIKPWPFRGW
Sbjct: 198 QLVPAAELHPIIKPWPFRGW 217
>OMO69434.1 hypothetical protein CCACVL1_19513 [Corchorus capsularis]
Length = 51
Score = 50.8 bits (120), Expect(2) = 3e-10
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -1
Query: 339 GHYWPTVLSDCIAHAKSCDACQR 271
GHYWPT SDCIAH KSCDACQR
Sbjct: 3 GHYWPTGPSDCIAHGKSCDACQR 25
Score = 41.6 bits (96), Expect(2) = 3e-10
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 262 QRKPASELYPIIKPWPFRG 206
QRK SELYPIIKPWPFRG
Sbjct: 28 QRKAGSELYPIIKPWPFRG 46