BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00026459
         (777 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   334   e-102
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat...   315   e-100
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   318   1e-96
ANY93292.1 RdRp [Plantago asiatica mosaic virus]                      316   8e-96
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   316   8e-96
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   316   8e-96
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   315   1e-95
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   314   3e-95
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   314   4e-95
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   314   4e-95
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   314   4e-95
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   313   7e-95
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   313   7e-95
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   313   7e-95
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   311   3e-94
AAX19931.1 viral replicase [Nandina mosaic virus]                     309   2e-93
AMD78101.1 RdRP [Plantago asiatica mosaic virus]                      305   6e-92
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ...   291   8e-87
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678...   206   5e-57
BAU45634.1 RNA-dependent RNA polymerase [Hydrangea ringspot virus]    102   5e-21

>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score =  334 bits (856), Expect = e-102
 Identities = 169/258 (65%), Positives = 190/258 (73%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCF+DVLSGNL+QRLLRPLR+D
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFQDVLSGNLLQRLLRPLRAD 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
             QRVLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DA
Sbjct: 374  FQRVLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            DT R F++F+  +      T+  +LE +AE+   HT LKV    L  +QL A+H LG+ R
Sbjct: 434  DTSRGFQDFTRATTPKLQPTVEATLEATAESSDHHTQLKVLCDTLPEKQLEAIHALGHLR 493

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGPLLP  T      E           + AS A    +  D  P    P TLPWVAWLP
Sbjct: 494  CGGPLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTTQAPETLPWVAWLP 553

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALE+Q DPST
Sbjct: 554  KLNALGFEALEVQHDPST 571


>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 669

 Score =  315 bits (808), Expect = e-100
 Identities = 164/259 (63%), Positives = 184/259 (71%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +  +LE  AE    H SL++    LS  QL ALH+LGN R
Sbjct: 434  ETTHSFQAFCQAA-----AAVETTLEQQAETPDEHQSLRLDCPTLSEHQLWALHKLGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  318 bits (815), Expect = 1e-96
 Identities = 166/259 (64%), Positives = 184/259 (71%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PF +P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +   LE SAE    H SL++    LS  QL ALHELGNTR
Sbjct: 434  ETTHSFQAFCQAT-----AAVGTILEQSAETPDEHQSLRLNCPTLSEHQLWALHELGNTR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPDLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  316 bits (809), Expect = 8e-96
 Identities = 165/259 (63%), Positives = 183/259 (70%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +   LE  AE    H SL++    LS  QL ALHELGN R
Sbjct: 434  ETTHSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  316 bits (809), Expect = 8e-96
 Identities = 165/259 (63%), Positives = 183/259 (70%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +   LE  AE    H SL++    LS  QL ALHELGN R
Sbjct: 434  ETTHSFQAFCQAA-----AAVETILEQQAETPDEHXSLRLDCPTLSEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  316 bits (809), Expect = 8e-96
 Identities = 165/259 (63%), Positives = 183/259 (70%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +   LE  AE    H SL++    LS  QL ALHELGN R
Sbjct: 434  ETTHSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  315 bits (808), Expect = 1e-95
 Identities = 168/261 (64%), Positives = 187/261 (71%), Gaps = 3/261 (1%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL+S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLKSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            I ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  ITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   + T+       +LE  AE    H SL +    L   QL ALHELGNTR
Sbjct: 434  ETTQSFQAFCQATITAEA-----ALEQQAETPDEHQSLSLKCPTLPEHQLWALHELGNTR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQ---VPVNSDPATLPWVA 713
             GGPLLPK        +            + SA P     T Q   +P   DP TLPWVA
Sbjct: 489  CGGPLLPK-----GPAKLTTVEPCPDLPAENSANPEPPRKTTQTLDLPHPEDPTTLPWVA 543

Query: 714  WLPKLNALGFEALEIQTDPST 776
            WLPKLNALGFEALEIQTDPST
Sbjct: 544  WLPKLNALGFEALEIQTDPST 564


>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  314 bits (805), Expect = 3e-95
 Identities = 163/258 (63%), Positives = 186/258 (72%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   +      T+  +L   +E    H SL +  + L   QL ALHELGN R
Sbjct: 434  ETTQSFQAFCQAT-----ATVEXTLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGPLLPK  P +  R                  P +   +  +P   DP+TLPWVAWLP
Sbjct: 489  CGGPLLPK-GPAKLTRAEPCPDLPAEPQA-VPEPPHKTTQSSDLPHPQDPSTLPWVAWLP 546

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALEIQTDPST
Sbjct: 547  KLNALGFEALEIQTDPST 564


>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  314 bits (804), Expect = 4e-95
 Identities = 163/258 (63%), Positives = 186/258 (72%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   +      T+  +L   +E    H SL +  + L   QL ALHELGN R
Sbjct: 434  ETTQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGPLLPK  P +  R                  P +   +  +P   DP+TLPWVAWLP
Sbjct: 489  CGGPLLPK-GPAKLTRAEPCPDLPAEPQA-VPEPPHKTTQSSDLPHPQDPSTLPWVAWLP 546

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALEIQTDPST
Sbjct: 547  KLNALGFEALEIQTDPST 564


>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  314 bits (804), Expect = 4e-95
 Identities = 164/259 (63%), Positives = 183/259 (70%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +   LE  AE    H SL++    LS  QL ALHELGN R
Sbjct: 434  ETTHSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
            AMY62708.1 RNA-dependent RNA polymerase [Plantago
            asiatica mosaic virus]
          Length = 1380

 Score =  314 bits (804), Expect = 4e-95
 Identities = 164/259 (63%), Positives = 182/259 (70%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSS 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +F+ F   +       +   LE  AE    H SL++    LS  QL ALH LGN R
Sbjct: 434  ETTHSFQAFCQAA-----AAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHALGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTSTAVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  313 bits (802), Expect = 7e-95
 Identities = 163/258 (63%), Positives = 185/258 (71%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   +      T+  +L   +E    H SL +    L   QL ALHELGN R
Sbjct: 434  ETTQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGPLLPK  P +  R                  P +   +  +P   DP+TLPWVAWLP
Sbjct: 489  CGGPLLPK-GPAKLTRAEPCPDLPAEPQA-VPEPPHKTTQSSDLPHPQDPSTLPWVAWLP 546

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALEIQTDPST
Sbjct: 547  KLNALGFEALEIQTDPST 564


>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  313 bits (802), Expect = 7e-95
 Identities = 163/258 (63%), Positives = 185/258 (71%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   +      T+  +L   +E    H SL +    L   QL ALHELGN R
Sbjct: 434  ETTQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGPLLPK  P +  R                  P +   +  +P   DP+TLPWVAWLP
Sbjct: 489  CGGPLLPK-GPAKLTRAEPCPDLPAEPQA-VPEPPHKTTQSSDLPHPQDPSTLPWVAWLP 546

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALEIQTDPST
Sbjct: 547  KLNALGFEALEIQTDPST 564


>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  313 bits (802), Expect = 7e-95
 Identities = 163/258 (63%), Positives = 185/258 (71%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   +      T+  +L   +E    H SL +    L   QL ALHELGN R
Sbjct: 434  ETTQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGPLLPK  P +  R                  P +   +  +P   DP+TLPWVAWLP
Sbjct: 489  CGGPLLPK-GPAKLTRAEPCPDLPAEPQA-VPEPPHKTTQSSDLPHPQDPSTLPWVAWLP 546

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALEIQTDPST
Sbjct: 547  KLNALGFEALEIQTDPST 564


>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  311 bits (798), Expect = 3e-94
 Identities = 162/258 (62%), Positives = 185/258 (71%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS 
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA
Sbjct: 374  LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T ++F+ F   +      T+  +L   +E    H SL +  + L   QL ALHELGN R
Sbjct: 434  ETTQSFQAFCQAT-----ATVEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             G PLLPK  P +  R                  P +   +  +P   DP+TLPWVAWLP
Sbjct: 489  CGAPLLPK-GPAKLTRAEPCPDLPAEPQA-VPEPPHKTTQSSDLPHPQDPSTLPWVAWLP 546

Query: 723  KLNALGFEALEIQTDPST 776
            KLNALGFEALEIQTDPST
Sbjct: 547  KLNALGFEALEIQTDPST 564


>AAX19931.1 viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  309 bits (791), Expect = 2e-93
 Identities = 164/258 (63%), Positives = 183/258 (70%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSEITLLVNYFEF ASLDSHTCFEDVLSGNL+QRLLRPLR+D
Sbjct: 314  IWAKFRQLISTKELQHYQPSEITLLVNYFEFAASLDSHTCFEDVLSGNLLQRLLRPLRAD 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
            +QR+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNPDDA
Sbjct: 374  MQRILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T  +FREF      S   T+ + LE S E+  +HTSLKV    LS EQL ALHELGN+R
Sbjct: 434  ETTESFREFIQPLNPSPTATVTEMLENSTESDVTHTSLKVVPQSLSPEQLSALHELGNSR 493

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLP 722
             GGP+LPK +                  T  S+   +  H    P        P  +   
Sbjct: 494  CGGPMLPKRSSNH---------------THTSSDLLRRRH----PRQQRSTNPPMGSLAA 534

Query: 723  KLNALGFEALEIQTDPST 776
            K   +GFEALEIQTDPST
Sbjct: 535  KAKRIGFEALEIQTDPST 552


>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  305 bits (781), Expect = 6e-92
 Identities = 160/259 (61%), Positives = 179/259 (69%), Gaps = 1/259 (0%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            IWAKFRQLISTKELQHYQPSE TLLVNYFE TASLDSHTCFED+LSGNL+QR+LRPL S 
Sbjct: 314  IWAKFRQLISTKELQHYQPSETTLLVNYFELTASLDSHTCFEDILSGNLLQRILRPLTSG 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
              ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +PFT+P PVNPDDA
Sbjct: 374  ATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDSPFTRPQPVNPDDA 433

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
            +T   F+ F   +       +   LE  AE    H SL++    LS  QL +LHELGN R
Sbjct: 434  ETTHIFQAFCQAA-----AAVETILEQQAETPEEHQSLRLDCPTLSEHQLWSLHELGNAR 488

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQ-GDHTDQVPVNSDPATLPWVAWL 719
             GGPLLP+                    T A+  PSQ       +P   DP TLPWVAWL
Sbjct: 489  CGGPLLPQ---RPDTATVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWL 545

Query: 720  PKLNALGFEALEIQTDPST 776
            PKLNALGFEALEIQ DPST
Sbjct: 546  PKLNALGFEALEIQNDPST 564


>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
            mosaic virus]
          Length = 1385

 Score =  291 bits (744), Expect = 8e-87
 Identities = 152/253 (60%), Positives = 177/253 (69%)
 Frame = +3

Query: 18   RQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQRVL 197
            +QLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDV    L  +        I R+L
Sbjct: 318  QQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDV-PPKLAPKTTPAPPLGISRIL 376

Query: 198  QFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADTMRA 377
            QFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DAD    
Sbjct: 377  QFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADISSR 436

Query: 378  FREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLGGPL 557
            F++FS  + ++   T+   LE SAE+   HT LKV  + LS  QL A+H LG++R GGPL
Sbjct: 437  FQDFSRATNSTPKPTVEAVLEASAESPDHHTQLKVLCSALSEGQLEAIHALGHSRCGGPL 496

Query: 558  LPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNSDPATLPWVAWLPKLNAL 737
            LP++T +    E           ++AS A S     D  P   +P TLPWVAWLPKLNAL
Sbjct: 497  LPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTAQNPETLPWVAWLPKLNAL 556

Query: 738  GFEALEIQTDPST 776
            GFEALE+Q DPST
Sbjct: 557  GFEALEVQHDPST 569


>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1 RNA-dependent
            RNA polymerase [Tulip virus X]
          Length = 1361

 Score =  206 bits (524), Expect = 5e-57
 Identities = 124/265 (46%), Positives = 153/265 (57%), Gaps = 9/265 (3%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            +WAKFRQLISTKELQH+QP E TLLVNYF+F A+LDS TC ED+LSG+L+ RLLRP R +
Sbjct: 313  LWAKFRQLISTKELQHFQPDEATLLVNYFDFVANLDSATCHEDILSGSLLTRLLRPARVN 372

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDA 362
             Q +++FF+G P   KLIKAL WQP+ LEF V TV    R PPGF +P  +P PVN  DA
Sbjct: 373  WQALVRFFKGSPDHTKLIKALQWQPVLLEFKVSTVLVHKRTPPGFRHPLCRPLPVNEVDA 432

Query: 363  DTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTR 542
             T  A                            ++ SL + +  LS +QL ALH LG+ R
Sbjct: 433  LTTAA---------------------------CANQSLPLDN--LSEDQLEALHVLGSLR 463

Query: 543  LGGPLLPKITPEEQDREXXXXXXXXXXXTKASAAPSQGDHTDQVPVNS---------DPA 695
              G  LP  +P +   E           T ++A P++   T  V V++         DP 
Sbjct: 464  TDGESLP--SPPKAPLETGPHPTP----TISAAGPTKTVPTPNVEVSANPLTGTPLPDPD 517

Query: 696  TLPWVAWLPKLNALGFEALEIQTDP 770
            TLPW AWLP L ALGFEA EIQTDP
Sbjct: 518  TLPWKAWLPHLRALGFEASEIQTDP 542


>BAU45634.1 RNA-dependent RNA polymerase [Hydrangea ringspot virus]
          Length = 1387

 Score =  102 bits (254), Expect = 5e-21
 Identities = 86/266 (32%), Positives = 121/266 (45%), Gaps = 10/266 (3%)
 Frame = +3

Query: 3    IWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSD 182
            ++AKFRQL  T +LQ   P EITL+VNYF   + LDS TCF+D+LSG+ ++RLL+PL   
Sbjct: 314  LYAKFRQLTKTDDLQELDPKEITLVVNYFLLISRLDSVTCFDDILSGSALRRLLKPLICW 373

Query: 183  IQRVLQFFRGRPSFVKLIKALDWQPITLEFPV---RTVNTRLRGPPGFHNPFTKPHPVNP 353
            ++++ Q   GR  FV+L+KAL+W  IT    V    T +T  R   G        + + P
Sbjct: 374  MEKMRQTIFGREEFVRLMKALEWTDITFTEQVMAYHTGSTWERFLGGSFKALPLGNELGP 433

Query: 354  DDADTMRAFREFSYTSETSTPTTIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELG 533
               + +RA     Y +   T     D  +  AE  A   +   G   L      A  E  
Sbjct: 434  GLPEELRAEVARYYGNALLTG---LDETDPKAEAFALLCNNPHG-TTLFAPPSTAPEEDI 489

Query: 534  NTRLGGPLLPKITPE---EQDREXXXXXXXXXXXTKASAAPSQGDHTDQV----PVNSDP 692
              R+    +P+ +P    E                 A+    +    DQ     PV++  
Sbjct: 490  THRVLALKVPRGSPPPGFEGPSSAAQPEHEKEVAKPATPLEQEKQPEDQKMITRPVSALE 549

Query: 693  ATLPWVAWLPKLNALGFEALEIQTDP 770
              LPW  W P L  LGF+A EIQ  P
Sbjct: 550  DALPWNKWTPILRGLGFQAREIQRSP 575