BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00025935
         (259 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMO71243.1 hypothetical protein CCACVL1_18338 [Corchorus capsula...    55   2e-07
OMO56897.1 reverse transcriptase [Corchorus capsularis]                57   2e-07
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ...    54   2e-06
GAU31849.1 hypothetical protein TSUD_114600 [Trifolium subterran...    52   5e-06
ABE80156.1 Ribonuclease H [Medicago truncatula]                        52   8e-06
GAU30014.1 hypothetical protein TSUD_160990 [Trifolium subterran...    51   9e-06
AIK35195.1 LINE-type retrotransposon LIb DNA [Ipomoea batatas]         52   9e-06

>OMO71243.1 hypothetical protein CCACVL1_18338 [Corchorus capsularis]
          Length = 163

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = -2

Query: 255 ALHHTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPRGF 94
           ++HHTLR+GN S D L+KLG S+     +F  PP E+  ++  +  GV +PRGF
Sbjct: 107 SIHHTLRKGNFSADKLSKLGCSLDEDYAVFRSPPQEVLDVLQAEVMGVAYPRGF 160


>OMO56897.1 reverse transcriptase [Corchorus capsularis]
          Length = 1373

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = -2

Query: 249  HHTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPRGF 94
            HHTLREGN S D L+KLG SI     ++  PP E+  +   D  GV +PRGF
Sbjct: 1319 HHTLREGNFSVDRLSKLGCSIDDDYVVYRSPPQEVLAVFQADMRGVAYPRGF 1370


>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = -2

Query: 255 ALHHTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPR 100
           +L+HTLREGNQS D+LAKLGA     + I   PP E+  ++  DAAG  F R
Sbjct: 817 SLNHTLREGNQSADYLAKLGAMSDVNVLIHQSPPDELCPLLKNDAAGTLFLR 868


>GAU31849.1 hypothetical protein TSUD_114600 [Trifolium subterraneum]
          Length = 171

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)
 Frame = -2

Query: 258 VALHHTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPR 100
           V+  HTLREGN+  D LAK GAS    LKI++  P ++S+++  D  GV  PR
Sbjct: 118 VSFQHTLREGNECADWLAKTGASSNDTLKIWNSCPPQLSLVLLADVVGVARPR 170


>ABE80156.1 Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 24/53 (45%), Positives = 31/53 (58%)
 Frame = -2

Query: 258 VALHHTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPR 100
           + LHHTLREGNQ  D  AKLGA+    L +   PP ++  ++  DA G  F R
Sbjct: 385 ITLHHTLREGNQCADFFAKLGANSDVHLVVHQSPPADLLPLLRADAIGTVFIR 437


>GAU30014.1 hypothetical protein TSUD_160990 [Trifolium subterraneum]
          Length = 168

 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 26/53 (49%), Positives = 34/53 (64%)
 Frame = -2

Query: 258 VALHHTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPR 100
           VA+ HTLREGN   D LAK+G+S +    + DEPP ++S  +  DA GV F R
Sbjct: 115 VAVIHTLREGNACADVLAKMGSSESSAQVVLDEPPPQLSSALHADALGVAFAR 167


>AIK35195.1 LINE-type retrotransposon LIb DNA [Ipomoea batatas]
          Length = 1836

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = -2

Query: 246  HTLREGNQSTDHLAKLGASIT*RLKIFDEPPLEMSVIMAGDAAGVTFPR 100
            HT REGNQ  DHLA +G SIT     +D PP E++ ++  DA GVT+ R
Sbjct: 1786 HTFREGNQCADHLANIGQSITSGTTWWDHPPAELTELLNRDAWGVTYCR 1834