BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00025345
         (817 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [...   105   6e-29
XP_019094473.1 PREDICTED: uncharacterized protein LOC109129898 [...   111   9e-27
OMO65780.1 reverse transcriptase [Corchorus capsularis]               117   1e-26
KYP65493.1 Putative ribonuclease H protein At1g65750 family [Caj...   114   1e-26
EOY24339.1 RNA-directed DNA polymerase (Reverse transcriptase), ...   116   9e-26
KYP57789.1 Putative ribonuclease H protein At1g65750 family [Caj...   112   1e-25
OMP01064.1 reverse transcriptase [Corchorus capsularis]               103   4e-25
KYP65965.1 Putative ribonuclease H protein At1g65750 family [Caj...    96   6e-25
GAU46467.1 hypothetical protein TSUD_402340 [Trifolium subterran...   110   7e-25
KYP76862.1 Putative ribonuclease H protein At1g65750, partial [C...   112   1e-24
BAB09815.1 non-LTR retroelement reverse transcriptase-like [Arab...   109   1e-24
OMP05267.1 reverse transcriptase [Corchorus capsularis]               113   1e-24
EOY24207.1 Non-LTR retroelement reverse transcriptase [Theobroma...   103   2e-24
AID60103.1 hypothetical protein [Brassica napus]                      108   2e-24
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...   102   4e-24
OMO86377.1 reverse transcriptase [Corchorus capsularis]               108   7e-24
XP_016206284.1 PREDICTED: uncharacterized protein LOC107646622 [...   110   9e-24
OMP03175.1 reverse transcriptase [Corchorus capsularis]               110   1e-23
XP_013668797.1 PREDICTED: uncharacterized protein LOC106373127 [...   102   1e-23
GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]   109   1e-23

>XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [Arachis ipaensis]
          Length = 1901

 Score =  105 bits (261), Expect(2) = 6e-29
 Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
 Frame = +1

Query: 46   CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWGV 225
            C   +ES +H  RDC  A   W  +      ++FF  +++EW+  NLT +       W  
Sbjct: 1619 CRSHEESTIHVLRDCPYAMSIWNRLIPPNGRSSFFNTELNEWLYQNLTTNK-----NWNC 1673

Query: 226  WFGFTAMIIWQARNEWIFQG----VRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLL 393
             FG     IW  RN+ +F G    V  +  Q+  R  +      +S +   ++     L+
Sbjct: 1674 LFGVALSSIWYLRNKLVFNGESAHVNTAVNQIKARSEEFLSLTRSSLKPQKSQAAGESLI 1733

Query: 394  SSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVA 573
                   W  P  G VK+N D +   H   AA GGV R+SDG F+ G++ ++G  +   A
Sbjct: 1734 R------WSCPEEGCVKVNVDGSWFGHTRNAACGGVFRNSDGRFLQGFSCNLGNCSIMHA 1787

Query: 574  ELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGG 681
            EL A++ GL +   +G+  + +E+DS  ++  I  G
Sbjct: 1788 ELWAVIHGLSIATTKGYQCLFVESDSAEAINFINRG 1823



 Score = 51.2 bits (121), Expect(2) = 6e-29
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +2

Query: 680  GCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKFG 814
            GCS  HPC+P V +I+G   RIQ+    H+LREAN VAD  AK G
Sbjct: 1823 GCSPTHPCAPLVQDIRGLAARIQKITWLHSLREANSVADLLAKKG 1867


>XP_019094473.1 PREDICTED: uncharacterized protein LOC109129898 [Camelina sativa]
          Length = 1738

 Score =  111 bits (277), Expect(2) = 9e-27
 Identities = 71/224 (31%), Positives = 97/224 (43%), Gaps = 10/224 (4%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
            VCS  +ES+LH  RDC      W  +   R    FF   +  W+  NL   L      W 
Sbjct: 1449 VCSGAEESILHVLRDCPAISGIWRRLVPQRKQPEFFDQSLLPWLFRNLRVGLNSRNGHWS 1508

Query: 223  VWFGFTAMIIWQARNEWIFQGVRHSTTQLF----------HRIHQQAMAVLNSCQGAATR 372
              F  T    W+ R   +F G R +   +           HR H  ++       G    
Sbjct: 1509 TLFSMTVWWAWKWRCSDVF-GERRTCRDMLKFVKDMAEEVHRAHSLSVNTTGGRVGVEQL 1567

Query: 373  VVSPFLLSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIG 552
            V             W  P  GWVKL +D A   +   AAAGG +RD +G ++ G+A +IG
Sbjct: 1568 V------------KWVCPNVGWVKLTTDGASRGNPGLAAAGGAIRDREGAWLGGFAINIG 1615

Query: 553  EATTTVAELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGM 684
              T  +AEL  +  GL L W RGF +V +E DSL  V L++ G+
Sbjct: 1616 VCTAPLAELWGVYYGLHLAWGRGFRRVELEVDSLLVVGLLKSGI 1659



 Score = 37.7 bits (86), Expect(2) = 9e-27
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +2

Query: 674  REGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKF 811
            + G SS HP S  V   Q ++ R     I+H  REAN++ADG A +
Sbjct: 1656 KSGISSAHPLSFLVRLCQSFVSRDWLVRINHVYREANRLADGLANY 1701


>OMO65780.1 reverse transcriptase [Corchorus capsularis]
          Length = 1712

 Score =  117 bits (294), Expect(2) = 1e-26
 Identities = 76/218 (34%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
 Frame = +1

Query: 46   CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTD--HLLIDGLEW 219
            C   +E+ LH  RDC  AK+ W     G    NFF     +W   NL D  + LI    W
Sbjct: 1426 CGAANENTLHVLRDCPHAKEVWNHWV-GASDTNFFRCSEAQWWNANLIDQKNRLIGDWPW 1484

Query: 220  GVWFGFTAMIIWQARNEWIFQGVRHSTTQ---LFHRIHQQAMAVLNSCQGAATRVVSPFL 390
             + F  TA  IW+ RNE  F    ++ +    +  +I ++A+   N   G   R     L
Sbjct: 1485 SLIFAVTAWRIWKWRNEGCFANKSYTVSTKLAIIGKILKEAIDFSNRKMGQHMR--REVL 1542

Query: 391  LSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTV 570
            +       W  P  G VK+N+D +      +AA GGVVR S G ++LG++  +GE +  +
Sbjct: 1543 IG------WEKPKEGQVKINTDGSWFQRTNEAAVGGVVRGSCGEWLLGFSQSVGECSIDL 1596

Query: 571  AELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGM 684
            AEL  IL GL L W RGF  + +E+DS TSV +I+ G+
Sbjct: 1597 AELWGILQGLSLAWSRGFNDIVVESDSATSVDMIKKGV 1634



 Score = 30.8 bits (68), Expect(2) = 1e-26
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 674  REGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAK 808
            ++G +  HP    +  IQ YL +   C + +  RE N VAD  AK
Sbjct: 1631 KKGVNKNHPHFCIIAAIQDYLSKEWTCQLHYIPREKNFVADWMAK 1675


>KYP65493.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 301

 Score =  114 bits (286), Expect = 1e-26
 Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 9/222 (4%)
 Frame = +1

Query: 43  VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVD----EWIEVNLTDHLLIDG 210
           +C    E  +HA RD   AK  W  +    P   +  H +D    EW+  +LT   L  G
Sbjct: 19  ICMLDSEDTMHALRDSISAKQVWTTM----PGRIYIYHPLDINIQEWLLFHLTRRSLGGG 74

Query: 211 LEWGVWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQ----GAATRVV 378
           + W + F  T   +WQ RN+ +FQ    ST QL   +  +A +++NS      G  T V 
Sbjct: 75  MNWPLTFAITIDALWQRRNKAVFQHSFSSTNQLISIVMNRANSIVNSNSPFDAGDQTGVT 134

Query: 379 SPFLLSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEA 558
           +    S+        P +G++KLN D AV+N G  ++ GG+VRDS+G  IL Y+  +   
Sbjct: 135 NKLRNSN-------GPPSGYIKLNGDGAVSNAGT-SSCGGLVRDSNGRCILAYSRKLDHC 186

Query: 559 TTTVAELQAILMGLKLVWRRGF-TKVTMETDSLTSVCLIQGG 681
           +   AEL AIL GL+L+  R   + + +E+DSL ++ L++ G
Sbjct: 187 SVLKAELWAILQGLRLIHLRSLGSHILIESDSLEAITLLKNG 228


>EOY24339.1 RNA-directed DNA polymerase (Reverse transcriptase),
           Polynucleotidyl transferase, Ribonuclease H fold-like
           protein [Theobroma cacao]
          Length = 616

 Score =  116 bits (290), Expect = 9e-26
 Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 3/207 (1%)
 Frame = +1

Query: 40  AVCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDH-LLIDGLE 216
           A+CS  DES+LH  RDC  +K+ W+ +       NFF   + +W+  NL ++ + +DG+ 
Sbjct: 382 ALCSVSDESVLHLLRDCPHSKEVWLKLGSRMGYGNFFDLLLSDWLLTNLKNYNVCVDGIP 441

Query: 217 WGVWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLS 396
           W + FGFT   IW+ RN  +F+G      +    I     A  ++ Q   T      L  
Sbjct: 442 WVILFGFTCWYIWKWRNVKVFEGKLIPMDRKLSMIKGLVAASYHAVQIPCTH---SRLNG 498

Query: 397 SR*E--AAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTV 570
            + E    W  P  GWV +N+D A+  +   AAAGGV RD +  ++ G+A+ +G+  +  
Sbjct: 499 YKREMLVGWQNPPQGWVAVNTDGALRRNTNMAAAGGVFRDCNEYWLGGFAAKLGKCYSYR 558

Query: 571 AELQAILMGLKLVWRRGFTKVTMETDS 651
           AEL  +L  L++V  +GF+K+ ++ D+
Sbjct: 559 AELWGVLHSLRIVKEKGFSKIWLQVDN 585


>KYP57789.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 299

 Score =  112 bits (279), Expect = 1e-25
 Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 1/215 (0%)
 Frame = +1

Query: 40  AVCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEW 219
           ++C   +E ++H  RDC  AK+ W  I  G   +     +   WI  NLT    +    W
Sbjct: 18  SICRQGEEDIIHVLRDCKFAKEVWSKIPGGAAVSRSINGEFQSWIISNLTRKSQVTP-NW 76

Query: 220 GVWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSS 399
            + F FT   IW  RN+ IFQ    S  Q+   I  +  + + +    A  + +P   S 
Sbjct: 77  SITFAFTLDSIWYRRNKLIFQNSILSVDQVVGEIRARVNSFVAATLTGAACMRTPLFSSD 136

Query: 400 R*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAEL 579
                W  P   ++KLN D AVT  G   + GGVVRDS+G FI+ ++  +G  +   +EL
Sbjct: 137 H----WKRPPERFIKLNGDGAVTKDGY-GSCGGVVRDSEGRFIIAFSKSLGRCSIIQSEL 191

Query: 580 QAILMGLKLVWRRGF-TKVTMETDSLTSVCLIQGG 681
            A+L+GL+L+       ++++E+DS  +V LI+ G
Sbjct: 192 WALLLGLRLIQNHHLGGQISIESDSKEAVKLIEEG 226


>OMP01064.1 reverse transcriptase [Corchorus capsularis]
          Length = 789

 Score =  103 bits (258), Expect(2) = 4e-25
 Identities = 59/210 (28%), Positives = 101/210 (48%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
            +C D +E   H  R+C  A   W  +    P+N F   ++ +W+  NL+     +G+ W 
Sbjct: 501  LCPDSEEDAFHIMRNCVLATSIWN-LCSSLPSNFFSQLNLFDWLSSNLSSSFFSNGIPWN 559

Query: 223  VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
            + F +    +W++RN  +FQG   +++Q+F+  H +A+   +    AA  V      SS 
Sbjct: 560  ILFSYICWGLWKSRNIRLFQGHVLTSSQVFNEYHIKAVEFFHIGLPAAKMV------SSL 613

Query: 403  *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
             +  W  P  GW KLNSD +   +   + AGG++R   G + +GY   I  AT+  AE  
Sbjct: 614  VDVCWNPPPQGWFKLNSDGSSVGNPGSSGAGGIIRKDTGEWFVGYVRKIHCATSLQAEFW 673

Query: 583  AILMGLKLVWRRGFTKVTMETDSLTSVCLI 672
             +  GL L    G + + +  D+   + L+
Sbjct: 674  GLRDGLTLAVDHGISFLDIAVDAKNVISLL 703



 Score = 39.7 bits (91), Expect(2) = 4e-25
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +2

Query: 695 HPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKFG 814
           HP    + + +  ++RIQ   ISH+ REANQ AD FA  G
Sbjct: 711 HPLGNIIYDCRKLMERIQNIKISHSFREANQAADAFANRG 750


>KYP65965.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1043

 Score = 95.9 bits (237), Expect(2) = 6e-25
 Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
 Frame = +1

Query: 40   AVCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEW 219
            ++C    E  LH  RDC  AK  W  +       + F  ++  W+  NL+      G  W
Sbjct: 752  SLCMHDTEDTLHVLRDCSFAKVVWRKLLGSTSDEHIFTDELHAWLVRNLSR----SGSRW 807

Query: 220  GVW---FGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFL 390
              W   F      +W   N+ +FQ  + S+ QL  +I     A ++S   + +  +  F 
Sbjct: 808  EGWQTCFALALDSLWHRCNQVLFQNSQTSSDQLIAKIK----ARISSLSSSVSLEIQQFS 863

Query: 391  LSS-----R*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGE 555
            L         E  WC P     KLN D +V+     A+ GG++RD +G FIL Y+  IG 
Sbjct: 864  LRQPPLIVTPEYQWCCPPRSLFKLNCDGSVSQ-ARGASCGGILRDEEGRFILAYSCHIGR 922

Query: 556  ATTTVAELQAILMGLKLVWRRGFT-KVTMETDSLTSVCLIQGG 681
             +    EL AIL GL+++  R  + +V +E+DS   + LI  G
Sbjct: 923  CSIIQTELWAILHGLRIIQSRKLSGRVMVESDSSLEIRLILEG 965



 Score = 47.0 bits (110), Expect(2) = 6e-25
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +2

Query: 677  EGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKFGL 817
            EGCSS HPCS  V EI    +++     +H LREA++VAD  AK+ L
Sbjct: 964  EGCSSAHPCSTLVQEIVELTRQVNFVSFTHILREADKVADFLAKYKL 1010


>GAU46467.1 hypothetical protein TSUD_402340 [Trifolium subterraneum]
          Length = 299

 Score =  110 bits (274), Expect = 7e-25
 Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
 Frame = +1

Query: 46  CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLL-IDGLEWG 222
           C   +E+ LH  RDC  AK+ WM +      + FF  D+  W  +NL   L+ I+ + W 
Sbjct: 11  CRVFEETSLHVLRDCDVAKEIWMVVVPRSVRSAFFGGDLSHWFSINLDGELVGINDINWP 70

Query: 223 VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQ-----GAATRVVSPF 387
            ++      +W  RN       R      F R  Q    ++  C+       A+RVV+  
Sbjct: 71  EFWATVCYFLWNWRN-------REYHDNSFTRPVQPVQVIMQRCREYKLAARASRVVTS- 122

Query: 388 LLSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTT 567
           +        W  P  GWVKLN+D A  N    A  GG++R++ G++I G+A  +G  +  
Sbjct: 123 VPRINVMIGWEPPSQGWVKLNTDGARKNERV-AGCGGIIRNNIGDWIGGFAKHVGSCSAF 181

Query: 568 VAELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGG 681
           VAEL  +L GL   W+ GF KV +E DS   V  +  G
Sbjct: 182 VAELWGVLEGLNYAWKLGFKKVELEIDSAIVVDAVNSG 219


>KYP76862.1 Putative ribonuclease H protein At1g65750, partial [Cajanus cajan]
          Length = 538

 Score =  112 bits (281), Expect = 1e-24
 Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
 Frame = +1

Query: 43  VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
           +C  + E+ LH  RDC  AK  W+++    P  +   + + +W+E NL+         W 
Sbjct: 331 ICKRERETTLHVLRDCLFAKSIWLSLYNDTPGFDLISNSILDWLEHNLSR----GNKGWS 386

Query: 223 VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
           + F  T    W+ARN ++FQ  + +TT L   I  ++  + N     A R V P    S 
Sbjct: 387 ITFAVTLDANWKARNTFVFQQFQLNTTLLLGEIRGRSRELSNRYSLTANRGVPP--PQSI 444

Query: 403 *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
               W  P+ G++KLN D AV N    A+ GGV+RD+ GNF+LG++  IG  +   AEL 
Sbjct: 445 LYIGWKVPLQGYLKLNCDGAV-NTSRVASCGGVLRDNQGNFMLGFSCRIGVCSILHAELW 503

Query: 583 AILMGLKLVWRRGF-TKVTMETDSLTSV 663
            I  GLK++  RG    +  E+DS+++V
Sbjct: 504 DIFYGLKILRGRGLCDNIISESDSISAV 531


>BAB09815.1 non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score =  109 bits (272), Expect(2) = 1e-24
 Identities = 64/214 (29%), Positives = 102/214 (47%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
            +C    ESL+H  RDC      WM +        FF   + EW+  NL +    +   W 
Sbjct: 387  LCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLLEWMYGNLKERSDSERRSWP 446

Query: 223  VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
              F  T    W+ R  ++F        ++  +  + A+A + +   AA       +L  R
Sbjct: 447  TLFALTVWWGWKWRCGYVFGEDSRCRDRV--KFLKSAVAEVEAAHLAANGDAREDVLVER 504

Query: 403  *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
               AW  P  GWV +N+D A   +  +A AGGV+RD  G++++G+A +IG  +  +AEL 
Sbjct: 505  -MIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELW 563

Query: 583  AILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGM 684
             +  GL + W RG+ +V +E DS   V  +Q G+
Sbjct: 564  GVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGI 597



 Score = 32.7 bits (73), Expect(2) = 1e-24
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 674 REGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKF 811
           + G    HP +  V    G++ +     I+H  REAN++ADG A +
Sbjct: 594 QSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLANY 639


>OMP05267.1 reverse transcriptase [Corchorus capsularis]
          Length = 1911

 Score =  113 bits (283), Expect = 1e-24
 Identities = 79/249 (31%), Positives = 114/249 (45%), Gaps = 4/249 (1%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNL--TD--HLLIDG 210
            VC+D  ES+ H  R C +A   W A+      +  F   + +W+E N+  TD  H  I  
Sbjct: 1602 VCNDPLESVKHVLRGCKQAISIWRALKPPENIHQSFTSGLRDWLEFNMKHTDPAHFTIP- 1660

Query: 211  LEWGVWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFL 390
              W + F F    IW+  N+  F     S  ++   I QQA     S   A  +      
Sbjct: 1661 --WNILFSFAIWEIWKHINDNFFGKTLRSNNRILQSIFQQAAEFFASSDNANNKK----- 1713

Query: 391  LSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTV 570
            LS   +  W  P AG++K+N+D A   +   A AGG++RDS G F+LG+   IG AT+T 
Sbjct: 1714 LSYTKQIQWTPPPAGFLKMNTDGASHGNPGLAGAGGIIRDSQGLFVLGFQKRIGFATSTA 1773

Query: 571  AELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGMFEYASMLS*GVGDSRLFTEDPR 750
             EL AI   L L   R    + +ETDS  ++ L+Q   F+   +L   + D R      R
Sbjct: 1774 VELWAIREELSLAKERNLNNIMLETDSQLAIDLLQ-NCFDPKHVLIVLLDDCRSLMAQLR 1832

Query: 751  VPYQSHAER 777
            +    H  R
Sbjct: 1833 IQTLQHTFR 1841


>EOY24207.1 Non-LTR retroelement reverse transcriptase [Theobroma cacao]
          Length = 391

 Score =  103 bits (258), Expect(2) = 2e-24
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
 Frame = +1

Query: 61  ESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLT-DHLLIDGLEWGVWFGF 237
           E+ LH  RDC  +K  W  I      N FF   + +W+  NL   +L +  + W + FG 
Sbjct: 136 ETCLHVLRDCPASKTLWRNILPQSGINQFFQTPLIDWLSSNLNLKNLYVFDVPWNIVFGI 195

Query: 238 TAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLL-SSR*EAA 414
                W+ RN +IF+G   S       I  ++MAV +    +   ++S  +         
Sbjct: 196 ACWYTWKWRNLFIFEGRELSVEGRLSII--KSMAVNSHNTWSTPSIISGGMRHQEEILVG 253

Query: 415 WCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQAILM 594
           W  P   W+ +NSD    +    AAAGGV+RD+ G +I+GYA  +  ++    EL     
Sbjct: 254 WSPPPKDWIAVNSDGVFKSAARTAAAGGVLRDAHGTWIVGYACKLETSSGLRVELWGFYK 313

Query: 595 GLKLVWRRGFTKVTMETDSLTSV 663
           GL+L W RGF KV +++D+   V
Sbjct: 314 GLQLAWERGFRKVKLQSDNKAMV 336



 Score = 37.4 bits (85), Expect(2) = 2e-24
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +2

Query: 686 SSMHPCS--PKVLEIQGYLQRIQECHISHTLREANQVADGFAKFG 814
           SS+HPCS    +  I+G L R  E +ISH  REAN  AD  +  G
Sbjct: 342 SSVHPCSNLDLIRAIKGMLGRHWEVNISHIYREANTTADFMSNLG 386


>AID60103.1 hypothetical protein [Brassica napus]
          Length = 620

 Score =  108 bits (270), Expect(2) = 2e-24
 Identities = 62/216 (28%), Positives = 104/216 (48%)
 Frame = +1

Query: 43  VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
           +C   DE++LH  RDC  A   W  +        FF   + EW+  NL +   ++G +W 
Sbjct: 331 LCKSGDETILHVLRDCPAAAGLWRKLVLPTRQQRFFNLTLFEWLYENLANDKSVNGDQWP 390

Query: 223 VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
             F  T    W+ R  ++F  +     ++   +  +A  V+ +      R  S   +   
Sbjct: 391 SLFALTVWWCWKWRCGYVFGEIGKCRDRV-RFVKDKAQEVIKA--NKKVREPSAIGVHVE 447

Query: 403 *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
            + AW  P  GWVKLN+D A   +   A AGG +RD +G +I G++ +IG  +  +AEL 
Sbjct: 448 RQIAWFVPENGWVKLNTDGASRGNPGLATAGGALRDEEGKWIGGFSLNIGICSAPLAELW 507

Query: 583 AILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGMFE 690
            +  GL + W +G  K+ +E DS + V  ++ G+ +
Sbjct: 508 GVYYGLCIAWDKGIRKLEVEVDSKSVVGFLKTGIHD 543



 Score = 32.3 bits (72), Expect(2) = 2e-24
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 674 REGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKF 811
           + G    HP S  V    G++ R    + SH  RE N++ADG A +
Sbjct: 538 KTGIHDSHPLSFLVRLCYGFVSRDWIVNFSHVYRETNRLADGLANY 583


>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score =  102 bits (253), Expect(2) = 4e-24
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
 Frame = +1

Query: 46   CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHL-LIDGLEWG 222
            C+ QDESLLH FRDC  +K  W  +      + F  +D  +W+  NL+  +   D   W 
Sbjct: 965  CNLQDESLLHVFRDCNFSKSIWQNLNVQNRRSFFHENDWHQWLLTNLSGMVGSKDEATWS 1024

Query: 223  VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
            + F      IW +RN +IF    H    +F  I  QA +++           S  + +S 
Sbjct: 1025 LKFAIILDKIWYSRNSFIFS---HKEINIF-TIIAQAASIMQFLSPNVDDSSSRQICNSS 1080

Query: 403  *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
                W  P   ++ LN D AVT     A  GGV+R+  G F++ +++  G  +   AEL 
Sbjct: 1081 -SIRWERPPENFIALNCDGAVTGLTGLAGCGGVLRNCHGGFLVAFSARAGSVSVVHAELW 1139

Query: 583  AILMGLKLVWRRGFTKVTMETDSLTSVCLIQGG 681
             I+ GL+L   +G  ++ +E+DS+ ++ LI+ G
Sbjct: 1140 GIINGLELAKNKGLKRIRVESDSMIAINLIRNG 1172



 Score = 38.1 bits (87), Expect(2) = 4e-24
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +2

Query: 674  REGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKFGL 817
            R GC+  HP    V       + ++     HT REANQVAD  AKF L
Sbjct: 1170 RNGCNKEHPAFHLVQTALRLTEGMESVLWQHTWREANQVADALAKFSL 1217


>OMO86377.1 reverse transcriptase [Corchorus capsularis]
          Length = 3633

 Score =  108 bits (269), Expect(2) = 7e-24
 Identities = 63/211 (29%), Positives = 107/211 (50%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
            +C D +ES+LH  RDC  A   W  I+   P + F   +V +W  +NL+D  +++ L W 
Sbjct: 3373 LCLDTEESVLHILRDCTIAHSLWDKISH-LPQHFFDCDNVFDWFRINLSDPNVVNNLPWP 3431

Query: 223  VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
              F +    +W +RN  +FQG       +F+    +A    +    A T+ V+  +++  
Sbjct: 3432 CLFAYCCWSLWYSRNARLFQGKALDFNSVFNTSFVKASEFFH-LGAAKTKFVARKIVNVH 3490

Query: 403  *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
                W  P  GW KLNSD +  ++   + +GG +R+  G ++ GYA +I  AT+  AEL 
Sbjct: 3491 ----WIPPSYGWFKLNSDGSTLDNPGLSGSGGCIRNEFGEWMYGYARNIVHATSVHAELW 3546

Query: 583  AILMGLKLVWRRGFTKVTMETDSLTSVCLIQ 675
             +  GLKL   +G + + +  D+   + LI+
Sbjct: 3547 GLRDGLKLALDKGISLLEVSIDAKVVITLIE 3577



 Score = 31.2 bits (69), Expect(2) = 7e-24
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 686  SSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKFG 814
            +++HP    +++ +  + +     +SH  RE N++AD  A  G
Sbjct: 3581 ANLHPLGNLIIDCRTLMSQFHRLKLSHCYREGNRLADALANLG 3623


>XP_016206284.1 PREDICTED: uncharacterized protein LOC107646622 [Arachis ipaensis]
          Length = 1460

 Score =  110 bits (276), Expect = 9e-24
 Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 5/213 (2%)
 Frame = +1

Query: 46   CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWGV 225
            C +  ES+LH  RDC  A+ TWM+I       NFF   +  W+  NL+   L  G+ W +
Sbjct: 832  CGEAIESMLHVIRDCRVARQTWMSIDARLRFGNFFNTPLLPWLLENLSSQSLFKGVHWPL 891

Query: 226  WFGFTAMIIWQARNEWIF---QGVRHSTTQL--FHRIHQQAMAVLNSCQGAATRVVSPFL 390
             F      +W  RN+ IF   + V  ++     F      +MA L   Q  + + V  F+
Sbjct: 892  LFVCIMNALWLRRNKVIFDSDEAVAENSIHFLAFRLAKDYSMAHLELAQ--SRKKVCNFI 949

Query: 391  LSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTV 570
                 +  W  P   ++KLNSD +V + G +AA GG++RDSDG FI  +++++   T T 
Sbjct: 950  ER---QIKWKPPDHPFIKLNSDGSVLD-GGRAACGGILRDSDGRFIACFSANLDGGTVTT 1005

Query: 571  AELQAILMGLKLVWRRGFTKVTMETDSLTSVCL 669
            AEL  IL+GL+L    G + + +E DSL +V L
Sbjct: 1006 AELLGILLGLELALNIGCSHLIIEADSLVAVKL 1038



 Score =  110 bits (275), Expect = 1e-23
 Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 5/213 (2%)
 Frame = +1

Query: 46   CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWGV 225
            C +  ES+LH  RDC  A+ TWM+I       NFF   +  W+  NL+   L  G++W +
Sbjct: 1170 CGEAIESMLHVIRDCRVARQTWMSIDARLRFGNFFNTPLLPWLLENLSSQSLFKGVQWPL 1229

Query: 226  WFGFTAMIIWQARNEWIF---QGVRHSTTQL--FHRIHQQAMAVLNSCQGAATRVVSPFL 390
             F      +W  RN+ IF   + V  ++     F      +MA L   Q  + + V  F+
Sbjct: 1230 LFVCIMNALWLRRNKVIFDSDEAVAENSIHFLAFRLAKDYSMAHLELAQ--SRKKVCNFI 1287

Query: 391  LSSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTV 570
                 +  W  P   ++KLNSD +V + G +AA GG++RDSDG FI  +++++   T T 
Sbjct: 1288 ER---QIKWKPPDHPFIKLNSDGSVLD-GGRAACGGILRDSDGRFIACFSANLNGGTVTT 1343

Query: 571  AELQAILMGLKLVWRRGFTKVTMETDSLTSVCL 669
             EL  IL+GL+L    G + + +E DSL +V L
Sbjct: 1344 TELLGILLGLELALNIGCSHLIIEADSLVAVKL 1376


>OMP03175.1 reverse transcriptase [Corchorus capsularis]
          Length = 862

 Score =  110 bits (275), Expect = 1e-23
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHL--LIDGLE 216
            +C    ES++H  RDC  AKD W+ +      + FF    +EW ++NL      +     
Sbjct: 589  MCGATIESMIHILRDCHVAKDVWLQLLGVGVNSLFFTCPEEEWWKLNLVQQRKKMFGCWP 648

Query: 217  WGVWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLN-SCQGAATRVVSPFLL 393
            W   F  T   +W+ RN++    +  S       I++     L  S Q  +T+      L
Sbjct: 649  WLTMFSITYWKLWKWRNDFRLSNISTSINTKMVLINKAIQETLELSTQSGSTKAKVEVQL 708

Query: 394  SSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVA 573
            S      W  P+ GW KLN+D +        A GGV+R   G +++G++  IG+ +  +A
Sbjct: 709  S------WDKPLEGWTKLNTDGSRNQTSDNVAIGGVIRGHCGEWVIGFSQAIGKCSIDMA 762

Query: 574  ELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGM 684
            EL AI  G+ L W RG  ++ +E++S TS+ +I+ G+
Sbjct: 763  ELWAIQQGISLAWNRGIRELEVESNSATSISMIKNGV 799


>XP_013668797.1 PREDICTED: uncharacterized protein LOC106373127 [Brassica napus]
          Length = 1818

 Score =  102 bits (255), Expect(2) = 1e-23
 Identities = 62/216 (28%), Positives = 98/216 (45%)
 Frame = +1

Query: 43   VCSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLTDHLLIDGLEWG 222
            VC    E++LH  RDC   +  W  +        FF   + +W+  NL D+ +I    W 
Sbjct: 1528 VCKGAPETVLHVLRDCPAMEGIWNRVVPMGKRQTFFTQPLLQWLFTNLGDNQMIGESTWS 1587

Query: 223  VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSCQGAATRVVSPFLLSSR 402
             +F  T    W+ R   +F   R    ++   +  +A  V  +      +   P     R
Sbjct: 1588 TFFAVTVWWAWKWRCGNVFGDTRLCRDRVKF-VKDKATEVTRATCALGNQNSVPQREERR 1646

Query: 403  *EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVAELQ 582
                W  P   W+KLN+D A   +   A AGGV+R+  G++  G+A +IG  +  +AEL 
Sbjct: 1647 --IGWIGPRDEWIKLNTDGASHGNPGDATAGGVLRNKFGDWCGGFAMNIGRCSAPLAELW 1704

Query: 583  AILMGLKLVWRRGFTKVTMETDSLTSVCLIQGGMFE 690
             +  GL L W RG T++ +E DS   V  ++ G+ E
Sbjct: 1705 GVYYGLVLAWERGITRLELEVDSAVVVGFLKTGIEE 1740



 Score = 35.8 bits (81), Expect(2) = 1e-23
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +2

Query: 674  REGCSSMHPCSPKVLEIQGYLQRIQECHISHTLREANQVADGFAKF 811
            + G    HP S  V    GYL +     I H  REAN++ADG A +
Sbjct: 1735 KTGIEETHPLSFLVRLCHGYLSKDWIVRIDHVYREANRLADGLANY 1780


>GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]
          Length = 482

 Score =  109 bits (272), Expect = 1e-23
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
 Frame = +1

Query: 46  CSDQDESLLHAFRDCGRAKDTWMAIARGRPANNFFIHDVDEWIEVNLT-DHLLIDGLEWG 222
           C D  ES++H  RDC  A++ W  I      + FF   ++ W++ NL+ D++  DG  W 
Sbjct: 222 CQDYPESIMHCLRDCEDAREFWTNIINPEVWSKFFSIGLNNWLDWNLSNDNIGNDGNNWS 281

Query: 223 VWFGFTAMIIWQARNEWIFQGVRHSTTQLFHRIHQQAMAVLNSC---QGAATRVVSPFLL 393
           ++FG     +W+ RN  +F  +      L  +I+ Q  +++N     +   TR     + 
Sbjct: 282 IFFGVAVNELWKDRNSLVFSNISGIDRNLLFKINTQVSSIINLHSFQKNLVTRQPGEVVA 341

Query: 394 SSR*EAAWCAPVAGWVKLNSDAAVTNHGAKAAAGGVVRDSDGNFILGYASDIGEATTTVA 573
            S     W  P+ GW K+N D +        A GG++R+  G F+ G+ S IG +    A
Sbjct: 342 VS-----WKPPLDGWHKVNVDGSFNTISGSTACGGLLRNQHGIFVKGFYSKIGSSNANWA 396

Query: 574 ELQAILMGLKLVWRRGFTKVTMETDSLTSVCLIQGG 681
           E+ A+ +G+++       KV  E DS   V ++  G
Sbjct: 397 EMWALRIGIRIAQNLLLPKVVFEMDSKVIVNMVTSG 432