BLASTX nr result

ID: Glycyrrhiza28_contig00024275 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00024275
         (966 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KRH44038.1 hypothetical protein GLYMA_08G186200 [Glycine max]         106   5e-23
XP_006585480.1 PREDICTED: uncharacterized protein At1g10890 isof...    63   1e-08

>KRH44038.1 hypothetical protein GLYMA_08G186200 [Glycine max]
          Length = 315

 Score =  106 bits (265), Expect = 5e-23
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = +1

Query: 700 MESKGYEQVLGSGKCFFHCSIVTFASPCRKRWSTQWLFLAIYEVTVHVFEFRTLEGGQDL 879
           M S+GYEQV+G+ + FFHCSIVTFAS C KRWSTQWLFLAI EVTVHVF F  L+GG+ L
Sbjct: 1   MGSEGYEQVMGADRVFFHCSIVTFASSCDKRWSTQWLFLAISEVTVHVFVFSVLDGGKHL 60

Query: 880 YSLKIA 897
           YSLKIA
Sbjct: 61  YSLKIA 66


>XP_006585480.1 PREDICTED: uncharacterized protein At1g10890 isoform X1 [Glycine
           max]
          Length = 330

 Score = 63.2 bits (152), Expect(2) = 1e-08
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = +1

Query: 769 FASPCRKRWSTQWLFLAIYEVTVHVFEFRTLEGGQDLYSLKIA 897
           ++S    RWSTQWLFLAI EVTVHVF F  L+GG+ LYSLKIA
Sbjct: 39  YSSYSYNRWSTQWLFLAISEVTVHVFVFSVLDGGKHLYSLKIA 81



 Score = 25.0 bits (53), Expect(2) = 1e-08
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 899 FQLLRFIAYDHL 934
           F LLRFIAYDH+
Sbjct: 82  FLLLRFIAYDHV 93


Top