BLASTX nr result

ID: Glycyrrhiza28_contig00024211 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00024211
         (526 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012568507.1 PREDICTED: pentatricopeptide repeat-containing pr...    91   6e-18
XP_004490797.1 PREDICTED: pentatricopeptide repeat-containing pr...    91   6e-18
XP_003616196.1 PPR containing plant-like protein [Medicago trunc...    71   3e-11

>XP_012568507.1 PREDICTED: pentatricopeptide repeat-containing protein At1g73710
           isoform X2 [Cicer arietinum]
          Length = 986

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +2

Query: 326 MSCADKFFVTIST--SSSSNPGAKIFTKPLWGNLPHLNARWVCPPLTCYHSKTPPLPTNF 499
           MSCA+KF V+ S+  SSSS     +FTKPL G+ P  N RWVCPPLTC HS+TPPLPT F
Sbjct: 1   MSCAEKFPVSTSSLSSSSSKIFTNVFTKPLLGHFPPRNPRWVCPPLTCLHSQTPPLPTKF 60

Query: 500 SPVSNKKKK 526
           S V+N KKK
Sbjct: 61  SSVNNNKKK 69


>XP_004490797.1 PREDICTED: pentatricopeptide repeat-containing protein At1g73710
           isoform X1 [Cicer arietinum]
          Length = 1002

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +2

Query: 326 MSCADKFFVTIST--SSSSNPGAKIFTKPLWGNLPHLNARWVCPPLTCYHSKTPPLPTNF 499
           MSCA+KF V+ S+  SSSS     +FTKPL G+ P  N RWVCPPLTC HS+TPPLPT F
Sbjct: 1   MSCAEKFPVSTSSLSSSSSKIFTNVFTKPLLGHFPPRNPRWVCPPLTCLHSQTPPLPTKF 60

Query: 500 SPVSNKKKK 526
           S V+N KKK
Sbjct: 61  SSVNNNKKK 69


>XP_003616196.1 PPR containing plant-like protein [Medicago truncatula] AES99154.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 981

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
 Frame = +2

Query: 326 MSCADKFFVTISTSSSSNPGAK----IFTKPLWGNLPHLNARWVCPPLTCYHSKTPPLPT 493
           MSCA+ F   +S+SS S+P +K    IFTKPL  + P LN RWV PPLTC+ SKT PLPT
Sbjct: 1   MSCAEIF--PVSSSSLSSPSSKFLTKIFTKPLLCHFPPLNPRWVSPPLTCFRSKTLPLPT 58

Query: 494 NFSPVSN 514
           N S   N
Sbjct: 59  NVSSTEN 65


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