BLASTX nr result
ID: Glycyrrhiza28_contig00023259
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00023259
(246 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF82248.1 plasmid partitioning protein RepB [Bradyrhizobium sp.... 132 5e-36
WP_024584215.1 plasmid partitioning protein RepB [Bradyrhizobium... 132 6e-36
WP_074448421.1 plasmid partitioning protein RepB [Bradyrhizobium... 122 4e-32
WP_028343029.1 plasmid partitioning protein RepB [Bradyrhizobium... 122 4e-32
WP_057744008.1 plasmid partitioning protein RepB [Bradyrhizobium... 121 1e-31
WP_039800569.1 plasmid partitioning protein RepB [Bradyrhizobium... 119 6e-31
WP_063710505.1 plasmid partitioning protein RepB [Bradyrhizobium... 117 6e-30
SDR63985.1 chromosome partitioning protein, ParB family [Rhizobi... 77 7e-15
WP_011504854.1 plasmid partitioning protein RepB [Nitrobacter ha... 76 2e-14
WP_056199035.1 plasmid partitioning protein RepB [Methylobacteri... 57 2e-07
WP_050631690.1 plasmid partitioning protein RepB [Bradyrhizobium... 55 4e-07
WP_066922466.1 plasmid partitioning protein RepB [Methylobacteri... 54 1e-06
WP_012333342.1 plasmid partitioning protein RepB [Methylobacteri... 54 1e-06
WP_025038353.1 plasmid partitioning protein RepB [Bradyrhizobium... 54 1e-06
WP_018260178.1 plasmid partitioning protein RepB [Methylobacteri... 54 1e-06
WP_038387554.1 plasmid partitioning protein RepB [Bradyrhizobium... 53 3e-06
SEP38043.1 chromosome partitioning protein, ParB family [Methylo... 52 7e-06
WP_060850788.1 plasmid partitioning protein RepB [Methylobacteri... 52 7e-06
WP_008120559.1 plasmid partitioning protein RepB [Phyllobacteriu... 52 9e-06
>ERF82248.1 plasmid partitioning protein RepB [Bradyrhizobium sp. DFCI-1]
Length = 338
Score = 132 bits (333), Expect = 5e-36
Identities = 70/81 (86%), Positives = 70/81 (86%)
Frame = -3
Query: 244 VGRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIER 65
VGRHDQKALADSVASDRFVRATSDERFAIAFVAL TWTDDDGKKIVKIER
Sbjct: 240 VGRHDQKALADSVASDRFVRATSDERFAIAFVALAPRKPKAPRPTTWTDDDGKKIVKIER 299
Query: 64 RADRVTLALDEKAAPAFGDFV 2
RADRVTLALDEKAAPAFGDFV
Sbjct: 300 RADRVTLALDEKAAPAFGDFV 320
>WP_024584215.1 plasmid partitioning protein RepB [Bradyrhizobium sp. OHSU_III]
Length = 343
Score = 132 bits (333), Expect = 6e-36
Identities = 70/81 (86%), Positives = 70/81 (86%)
Frame = -3
Query: 244 VGRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIER 65
VGRHDQKALADSVASDRFVRATSDERFAIAFVAL TWTDDDGKKIVKIER
Sbjct: 245 VGRHDQKALADSVASDRFVRATSDERFAIAFVALAPRKPKAPRPTTWTDDDGKKIVKIER 304
Query: 64 RADRVTLALDEKAAPAFGDFV 2
RADRVTLALDEKAAPAFGDFV
Sbjct: 305 RADRVTLALDEKAAPAFGDFV 325
>WP_074448421.1 plasmid partitioning protein RepB [Bradyrhizobium yuanmingense]
SCB51939.1 chromosome partitioning protein, ParB family
[Bradyrhizobium yuanmingense]
Length = 338
Score = 122 bits (307), Expect = 4e-32
Identities = 63/80 (78%), Positives = 66/80 (82%)
Frame = -3
Query: 241 GRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERR 62
GRHDQK+LAD+VASDRFVRATSD+RFAI F AL TW DDDGKKIVKIERR
Sbjct: 241 GRHDQKSLADTVASDRFVRATSDDRFAIVFAALAPRKPKTPRPTTWADDDGKKIVKIERR 300
Query: 61 ADRVTLALDEKAAPAFGDFV 2
ADRVTLALDEKAAPAFGDFV
Sbjct: 301 ADRVTLALDEKAAPAFGDFV 320
>WP_028343029.1 plasmid partitioning protein RepB [Bradyrhizobium elkanii]
Length = 338
Score = 122 bits (307), Expect = 4e-32
Identities = 63/80 (78%), Positives = 66/80 (82%)
Frame = -3
Query: 241 GRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERR 62
GRHDQK+LAD+VASDRFVRATSD+RFAI F AL TW DDDGKKIVKIERR
Sbjct: 241 GRHDQKSLADTVASDRFVRATSDDRFAIVFAALAPRKPKTPRPTTWADDDGKKIVKIERR 300
Query: 61 ADRVTLALDEKAAPAFGDFV 2
ADRVTLALDEKAAPAFGDFV
Sbjct: 301 ADRVTLALDEKAAPAFGDFV 320
>WP_057744008.1 plasmid partitioning protein RepB [Bradyrhizobium manausense]
KRQ15786.1 plasmid partitioning protein [Bradyrhizobium
manausense]
Length = 343
Score = 121 bits (304), Expect = 1e-31
Identities = 62/80 (77%), Positives = 66/80 (82%)
Frame = -3
Query: 241 GRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERR 62
GRHDQK+LAD++ASDRFVRATSD+RFAI F AL TW DDDGKKIVKIERR
Sbjct: 246 GRHDQKSLADAMASDRFVRATSDDRFAIVFAALAPRKSKTPRPTTWADDDGKKIVKIERR 305
Query: 61 ADRVTLALDEKAAPAFGDFV 2
ADRVTLALDEKAAPAFGDFV
Sbjct: 306 ADRVTLALDEKAAPAFGDFV 325
>WP_039800569.1 plasmid partitioning protein RepB [Bradyrhizobium sp. WSM4349]
Length = 338
Score = 119 bits (299), Expect = 6e-31
Identities = 62/81 (76%), Positives = 64/81 (79%)
Frame = -3
Query: 244 VGRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIER 65
VGRHDQK LADSVASDRFVRATSDERFAI AL TW DD GKKIVKIER
Sbjct: 240 VGRHDQKVLADSVASDRFVRATSDERFAITIAALAPRKPKVARPTTWADDGGKKIVKIER 299
Query: 64 RADRVTLALDEKAAPAFGDFV 2
RADR+TLA+DEKAAPAFGDFV
Sbjct: 300 RADRITLAVDEKAAPAFGDFV 320
>WP_063710505.1 plasmid partitioning protein RepB [Bradyrhizobium sp. CCBAU 15615]
Length = 338
Score = 117 bits (292), Expect = 6e-30
Identities = 61/80 (76%), Positives = 63/80 (78%)
Frame = -3
Query: 241 GRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERR 62
GRHDQK LADSVAS RFVRA SDERFAI F AL TW DDDGKKIVKIERR
Sbjct: 241 GRHDQKQLADSVASARFVRAASDERFAIVFAALAPREPKTPRPTTWADDDGKKIVKIERR 300
Query: 61 ADRVTLALDEKAAPAFGDFV 2
ADRVTLALDE+AAPAFGD+V
Sbjct: 301 ADRVTLALDERAAPAFGDYV 320
>SDR63985.1 chromosome partitioning protein, ParB family [Rhizobiales bacterium
GAS113]
Length = 338
Score = 77.0 bits (188), Expect = 7e-15
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = -3
Query: 238 RHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRA 59
R +K L +++ + +F A SD+RFA+ F A+ TWT +DGKK+ +IER
Sbjct: 242 RGAEKHLTEALQNPKFHAANSDDRFALLFAAITPRRPKPTRATTWTGEDGKKVARIERGV 301
Query: 58 DRVTLALDEKAAPAFGDFV 2
DRVTL++DEKAAP+FGDF+
Sbjct: 302 DRVTLSVDEKAAPSFGDFL 320
>WP_011504854.1 plasmid partitioning protein RepB [Nitrobacter hamburgensis]
ABE64885.1 ParB family protein (plasmid) [Nitrobacter
hamburgensis X14]
Length = 333
Score = 75.9 bits (185), Expect = 2e-14
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = -3
Query: 226 KALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADRVT 47
K L ++S RF+ A SDERFA+ A+ TWT DGKK+ KIER ADR
Sbjct: 243 KVLETVLSSPRFLAAPSDERFAMVLSAVTVRDTKPSKSTTWTASDGKKVAKIERNADRFV 302
Query: 46 LALDEKAAPAFGDFV 2
LALDE+AAP FGDFV
Sbjct: 303 LALDERAAPLFGDFV 317
>WP_056199035.1 plasmid partitioning protein RepB [Methylobacterium sp. Leaf123]
KQQ19151.1 plasmid partitioning protein RepB
[Methylobacterium sp. Leaf123]
Length = 345
Score = 56.6 bits (135), Expect = 2e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Frame = -3
Query: 232 DQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADR 53
DQ+AL + F +DERFA + A+ TW D G+K+ ++ER ADR
Sbjct: 253 DQRALTAVLGDPAFQAKGTDERFAAVYAAVAPKTERKPKAQTWKDAQGRKVARVERAADR 312
Query: 52 VTLALDEKAAPAFGDFV 2
V L+ DE P D+V
Sbjct: 313 VALSFDETVEPGLADYV 329
>WP_050631690.1 plasmid partitioning protein RepB [Bradyrhizobium viridifuturi]
Length = 332
Score = 55.5 bits (132), Expect = 4e-07
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = -3
Query: 241 GRHDQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERR 62
GR LA ++S F+ SD RF +A A +WT DGK + I+R+
Sbjct: 238 GRDAIGELAQLISSQAFLSKDSDARF-LAVCAALAPRPQRTEPESWTSADGKAVASIDRK 296
Query: 61 ADRVTLALDEKAAPAFGDFV 2
++ TLA++EK AP FG+FV
Sbjct: 297 TEKTTLAVNEKVAPGFGEFV 316
>WP_066922466.1 plasmid partitioning protein RepB [Methylobacterium sp. CCH5-D2]
Length = 345
Score = 54.3 bits (129), Expect = 1e-06
Identities = 27/77 (35%), Positives = 38/77 (49%)
Frame = -3
Query: 232 DQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADR 53
D+ AL + F +DERFA + AL TW D +G+K+ ++ER DR
Sbjct: 253 DRHALTTLLGDPAFQAKGTDERFAAVYTALAPKPEPKLKPQTWKDVEGRKVARVERATDR 312
Query: 52 VTLALDEKAAPAFGDFV 2
V L+ DE P D+V
Sbjct: 313 VALSFDETVEPGLADYV 329
>WP_012333342.1 plasmid partitioning protein RepB [Methylobacterium sp. 4-46]
ACA17943.1 plasmid partitioning protein RepB
[Methylobacterium sp. 4-46]
Length = 353
Score = 54.3 bits (129), Expect = 1e-06
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = -3
Query: 232 DQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADR 53
D+ AL+ +A F +D+RFA A+ WTD G+++ ++ER ADR
Sbjct: 261 DRAALSALLADPAFRAKPTDQRFAAILAAVAAPPARGGRPQVWTDPQGRRLARVERGADR 320
Query: 52 VTLALDEKAAPAFGDFV 2
V L+ DE+ P D++
Sbjct: 321 VALSFDERLEPGLADYI 337
>WP_025038353.1 plasmid partitioning protein RepB [Bradyrhizobium sp. DOA9]
GAJ37450.1 possible replication protein B
[Bradyrhizobium sp. DOA9]
Length = 332
Score = 53.9 bits (128), Expect = 1e-06
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = -3
Query: 220 LADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADRVTLA 41
LA ++S F SD RF +A A +WT DGK + IER+ ++ TLA
Sbjct: 245 LAPLISSQAFRSKNSDARF-LAVCAALAPRPQRTEPESWTSVDGKAVASIERKTEKTTLA 303
Query: 40 LDEKAAPAFGDFV 2
++EK AP FG+FV
Sbjct: 304 VNEKVAPGFGEFV 316
>WP_018260178.1 plasmid partitioning protein RepB [Methylobacterium sp. WSM2598]
Length = 353
Score = 53.9 bits (128), Expect = 1e-06
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = -3
Query: 232 DQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADR 53
D+ AL+ +A F ++D+RFA A+ WTD G+++ ++ER ADR
Sbjct: 261 DRAALSALLADPAFRAKSTDQRFAAILAAVAALPARGGRPQVWTDPQGRRLARVERGADR 320
Query: 52 VTLALDEKAAPAFGDFV 2
V ++ DE+ P D++
Sbjct: 321 VAVSFDERLEPGLADYI 337
>WP_038387554.1 plasmid partitioning protein RepB [Bradyrhizobium elkanii]
OIM95463.1 plasmid partitioning protein RepB
[Bradyrhizobium elkanii]
Length = 332
Score = 52.8 bits (125), Expect = 3e-06
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = -3
Query: 220 LADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADRVTLA 41
LA ++S F SD RF +A A +WT DGK + I+R+ ++ TLA
Sbjct: 245 LAPLISSQAFRSKDSDARF-LAVCAALAPRPQRAEPESWTSADGKAVASIDRKTEKTTLA 303
Query: 40 LDEKAAPAFGDFV 2
++EK AP FG+FV
Sbjct: 304 VNEKVAPGFGEFV 316
>SEP38043.1 chromosome partitioning protein, ParB family [Methylobacterium sp.
ap11]
Length = 359
Score = 52.0 bits (123), Expect = 7e-06
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = -3
Query: 226 KALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADRVT 47
K +A +A ++ERFA AL W+D+ G+ I +IERR DRV
Sbjct: 267 KRIAGLIADPALAETPTNERFAAVLHALAPPAAPKPAPQVWSDEAGRGIARIERRPDRVA 326
Query: 46 LALDEKAAPAFGDFV 2
++ DE A P D+V
Sbjct: 327 VSFDETAEPGLADYV 341
>WP_060850788.1 plasmid partitioning protein RepB [Methylobacterium aquaticum]
BAQ49801.1 plasmid partitioning protein (plasmid)
[Methylobacterium aquaticum]
Length = 360
Score = 52.0 bits (123), Expect = 7e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = -3
Query: 226 KALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXTWTDDDGKKIVKIERRADRVT 47
K +A +A ++ERFA AL W+D+ G+ I +IERR+DRV
Sbjct: 268 KRIAGLIADPALAGTPTNERFAAVLHALAPPAAPKPAPQVWSDEAGRGIARIERRSDRVA 327
Query: 46 LALDEKAAPAFGDFV 2
++ DE A P D+V
Sbjct: 328 VSFDETAEPGLADYV 342
>WP_008120559.1 plasmid partitioning protein RepB [Phyllobacterium sp. YR531]
EJN06771.1 plasmid partitioning protein RepB
[Phyllobacterium sp. YR531]
Length = 337
Score = 51.6 bits (122), Expect = 9e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 232 DQKALADSVASDRFVRATSDERFAIAFVALXXXXXXXXXXXT-WTDDDGKKIVKIERRAD 56
D A+ + SDRF A SD RFA+ F A+ WT +GK + +I++
Sbjct: 237 DLDAVETILESDRFKIADSDTRFALIFNAVSKRPAKPSRKVKAWTTPEGKTVARIQQEPG 296
Query: 55 RVTLALDEKAAPAFGDFV 2
R L DEK AP FG++V
Sbjct: 297 RTALIFDEKRAPLFGEYV 314