BLASTX nr result
ID: Glycyrrhiza28_contig00023142
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00023142
(445 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III] 151 2e-41
WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobi... 147 1e-39
EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis A... 147 1e-39
WP_041358589.1 replication protein C [Methylobacterium extorquens] 143 2e-38
CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4] 143 2e-38
WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ... 136 7e-35
WP_013913430.1 replication protein C [Oligotropha carboxidovoran... 132 5e-34
ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5] 132 1e-33
WP_048758169.1 replication protein C [Afipia felis] 127 4e-32
CEG10456.1 replication initiation protein RepC [Afipia felis] 127 4e-32
WP_024584976.1 hypothetical protein [Bradyrhizobium sp. OHSU_III] 117 8e-32
WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32... 111 2e-26
KTT92375.1 replication protein C, partial [Staphylococcus sciuri] 106 1e-25
WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR7945... 109 2e-25
WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobia... 108 4e-25
WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium] 104 1e-23
SHF79796.1 Replication protein C C-terminal region, partial [Dev... 96 4e-22
SCB50338.1 replication initiation protein RepC [Rhizobium multih... 100 5e-22
ODT74398.1 replication initiation protein RepC [Pelagibacterium ... 98 3e-21
WP_018391520.1 hypothetical protein [Ancylobacter sp. FA202] 98 3e-21
>WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III]
Length = 412
Score = 151 bits (382), Expect = 2e-41
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP
Sbjct: 326 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 385
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQGQAARDRE
Sbjct: 386 MLMALRRQGQAARDRE 401
>WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobiaceae] KIZ48201.1
replication protein C [Rhodopseudomonas palustris]
KQW18215.1 replication protein C [Afipia sp. Root123D2]
Length = 410
Score = 147 bits (370), Expect = 1e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
R MLGISPSAWEEAR+AMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP
Sbjct: 324 RSMLGISPSAWEEARIAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 383
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQGQAARDR+
Sbjct: 384 MLMALRRQGQAARDRD 399
>EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis ATCC 53690]
Length = 412
Score = 147 bits (370), Expect = 1e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
R MLGISPSAWEEAR+AMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP
Sbjct: 326 RSMLGISPSAWEEARIAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 385
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQGQAARDR+
Sbjct: 386 MLMALRRQGQAARDRD 401
>WP_041358589.1 replication protein C [Methylobacterium extorquens]
Length = 412
Score = 143 bits (361), Expect = 2e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIK+PGGYLRILARRAAAGKFSVWP
Sbjct: 324 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGKFSVWP 383
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQG ARD++
Sbjct: 384 MLMALRRQGPGARDKD 399
>CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4]
Length = 414
Score = 143 bits (361), Expect = 2e-38
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIK+PGGYLRILARRAAAGKFSVWP
Sbjct: 326 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGKFSVWP 385
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQG ARD++
Sbjct: 386 MLMALRRQGPGARDKD 401
>WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ABE65103.1
replication protein C (plasmid) [Nitrobacter
hamburgensis X14]
Length = 541
Score = 136 bits (342), Expect = 7e-35
Identities = 67/76 (88%), Positives = 73/76 (96%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEA AMGDGQASVVL+AILQRG AIK+PGGYLR+LARRAAAG+FSVWP
Sbjct: 453 RPMLGISPSAWEEACTAMGDGQASVVLAAILQRGAAIKSPGGYLRVLARRAAAGEFSVWP 512
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQG+AARDR+
Sbjct: 513 MLMALRRQGRAARDRD 528
>WP_013913430.1 replication protein C [Oligotropha carboxidovorans] AEI04578.1
replication protein C (plasmid) [Oligotropha
carboxidovorans OM4] AEI08207.1 replication protein C
(plasmid) [Oligotropha carboxidovorans OM5]
Length = 410
Score = 132 bits (331), Expect = 5e-34
Identities = 66/76 (86%), Positives = 70/76 (92%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEA AMGDGQASVVL+AILQRG AIK+PGGYLRILARRA G+FSVWP
Sbjct: 324 RPMLGISPSAWEEACNAMGDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGEFSVWP 383
Query: 264 MLMALRRQGQAARDRE 217
ML+ALRRQG AARDRE
Sbjct: 384 MLLALRRQGHAARDRE 399
>ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5]
Length = 484
Score = 132 bits (331), Expect = 1e-33
Identities = 66/76 (86%), Positives = 70/76 (92%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEA AMGDGQASVVL+AILQRG AIK+PGGYLRILARRA G+FSVWP
Sbjct: 398 RPMLGISPSAWEEACNAMGDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGEFSVWP 457
Query: 264 MLMALRRQGQAARDRE 217
ML+ALRRQG AARDRE
Sbjct: 458 MLLALRRQGHAARDRE 473
>WP_048758169.1 replication protein C [Afipia felis]
Length = 410
Score = 127 bits (318), Expect = 4e-32
Identities = 65/76 (85%), Positives = 68/76 (89%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LGIS SAWEEA AMGDGQASVVL+AILQRG AIKNPGGYLR LARRAAAGKFSVWP
Sbjct: 324 RPILGISSSAWEEACTAMGDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGKFSVWP 383
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQG A DR+
Sbjct: 384 MLMALRRQGCADNDRD 399
>CEG10456.1 replication initiation protein RepC [Afipia felis]
Length = 412
Score = 127 bits (318), Expect = 4e-32
Identities = 65/76 (85%), Positives = 68/76 (89%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LGIS SAWEEA AMGDGQASVVL+AILQRG AIKNPGGYLR LARRAAAGKFSVWP
Sbjct: 326 RPILGISSSAWEEACTAMGDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGKFSVWP 385
Query: 264 MLMALRRQGQAARDRE 217
MLMALRRQG A DR+
Sbjct: 386 MLMALRRQGCADNDRD 401
>WP_024584976.1 hypothetical protein [Bradyrhizobium sp. OHSU_III]
Length = 78
Score = 117 bits (293), Expect = 8e-32
Identities = 58/59 (98%), Positives = 59/59 (100%)
Frame = -1
Query: 178 VILLVSPPSFGASRGREYAASARTFLSGFARRRQAADPFEVVVDNAVDDPKRVCSLLGG 2
+ILLVSPPSFGASRGREYAASARTFLSGFARRRQAADPFEVVVDNAVDDPKRVCSLLGG
Sbjct: 1 MILLVSPPSFGASRGREYAASARTFLSGFARRRQAADPFEVVVDNAVDDPKRVCSLLGG 59
>WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32924.1 hypothetical
protein HMPREF9695_04939 [Afipia broomeae ATCC 49717]
Length = 410
Score = 111 bits (278), Expect = 2e-26
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LG+SPSAWEEA AMG G ASV L+ ILQRGN IKNPGGYLR LARRAAAG+FS+WP
Sbjct: 321 RPLLGVSPSAWEEACAAMGQGPASVTLALILQRGNGIKNPGGYLRTLARRAAAGQFSIWP 380
Query: 264 MLMALR 247
MLMALR
Sbjct: 381 MLMALR 386
>KTT92375.1 replication protein C, partial [Staphylococcus sciuri]
Length = 226
Score = 106 bits (264), Expect = 1e-25
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LG+SPSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+FS+WP
Sbjct: 160 RPLLGVSPSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWP 219
Query: 264 MLMAL 250
MLMAL
Sbjct: 220 MLMAL 224
>WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR79455.1 replication
protein C [Afipia sp. P52-10]
Length = 403
Score = 109 bits (272), Expect = 2e-25
Identities = 55/77 (71%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LG+SPSAWEE VAMG G ASV L+ ILQRG+AI+NPGGYLR LARRA+AG+FSVWP
Sbjct: 315 RPLLGVSPSAWEETCVAMGPGLASVTLALILQRGSAIRNPGGYLRTLARRASAGQFSVWP 374
Query: 264 MLMAL----RRQGQAAR 226
MLMAL R++ +AAR
Sbjct: 375 MLMALGATQRQKSEAAR 391
>WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae]
Length = 396
Score = 108 bits (269), Expect = 4e-25
Identities = 52/65 (80%), Positives = 59/65 (90%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEA + MG+ QA++V+SAILQRG AIKNPGGYLR L RRAAAG+FS+WP
Sbjct: 322 RPMLGISPSAWEEAGITMGETQAAIVVSAILQRGVAIKNPGGYLRNLTRRAAAGQFSMWP 381
Query: 264 MLMAL 250
MLMAL
Sbjct: 382 MLMAL 386
>WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium]
Length = 399
Score = 104 bits (259), Expect = 1e-23
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LGISPSAWEEA MG+ QAS+V++AILQRG AIKNPGGYLR L RRAAAG+FS+WP
Sbjct: 326 RPLLGISPSAWEEAGQVMGEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWP 385
Query: 264 MLMAL 250
ML+AL
Sbjct: 386 MLLAL 390
>SHF79796.1 Replication protein C C-terminal region, partial [Devosia limi DSM
17137]
Length = 184
Score = 95.9 bits (237), Expect = 4e-22
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LGISPSAWE+A+VAMG+ QA++ L+AI QR + IK+PGGYLR L RA GKFS WP
Sbjct: 68 RPVLGISPSAWEDAKVAMGEQQAAITLAAIYQRTDQIKSPGGYLRNLTERAKEGKFSTWP 127
Query: 264 MLMALRR 244
M+MAL R
Sbjct: 128 MIMALLR 134
>SCB50338.1 replication initiation protein RepC [Rhizobium multihospitium]
Length = 394
Score = 99.8 bits (247), Expect = 5e-22
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP+LGIS SAWEEA MG+ QA+++++AILQRG AIKNPGGYLR L RRA AG+FSVWP
Sbjct: 321 RPLLGISASAWEEAGQIMGEPQAAIIVAAILQRGVAIKNPGGYLRNLTRRAGAGQFSVWP 380
Query: 264 MLMAL 250
MLMAL
Sbjct: 381 MLMAL 385
>ODT74398.1 replication initiation protein RepC [Pelagibacterium sp. SCN 64-44]
Length = 447
Score = 98.2 bits (243), Expect = 3e-21
Identities = 44/67 (65%), Positives = 56/67 (83%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RP++GISPSAWE+ARVAMG+ QA++ L+AI Q+G+ +K+PGGYLR L RA GKFS WP
Sbjct: 331 RPVMGISPSAWEDARVAMGEQQAAITLAAIYQKGDEVKSPGGYLRYLTERAKEGKFSAWP 390
Query: 264 MLMALRR 244
M+MAL R
Sbjct: 391 MIMALVR 397
>WP_018391520.1 hypothetical protein [Ancylobacter sp. FA202]
Length = 409
Score = 97.8 bits (242), Expect = 3e-21
Identities = 50/75 (66%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Frame = -2
Query: 444 RPMLGISPSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWP 265
RPMLGISPSAWEEA+ AMG+ QA VV++AILQRG AI N GGY+R L R+A AG FS+ P
Sbjct: 334 RPMLGISPSAWEEAQAAMGEVQADVVVAAILQRGTAINNAGGYIRDLTRKAEAGAFSIGP 393
Query: 264 MLMAL--RRQGQAAR 226
MLMAL +R+G+ R
Sbjct: 394 MLMALIGKRKGEKRR 408