BLASTX nr result
ID: Glycyrrhiza28_contig00023013
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00023013
(478 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004516703.1 PREDICTED: pentatricopeptide repeat-containing pr... 89 2e-18
GAU26980.1 hypothetical protein TSUD_290300 [Trifolium subterran... 88 4e-18
XP_013452335.1 PPR containing plant protein [Medicago truncatula... 89 5e-18
KYP61906.1 Pentatricopeptide repeat-containing protein At4g21190... 72 5e-12
KHN42466.1 Pentatricopeptide repeat-containing protein [Glycine ... 66 3e-10
XP_006587265.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 3e-10
ACU23645.1 unknown [Glycine max] 66 3e-10
XP_003548152.1 PREDICTED: pentatricopeptide repeat-containing pr... 67 4e-10
XP_007152143.1 hypothetical protein PHAVU_004G106000g [Phaseolus... 65 1e-09
XP_019449705.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 4e-09
XP_017437793.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 3e-07
XP_015973781.1 PREDICTED: pentatricopeptide repeat-containing pr... 50 4e-07
XP_015948346.1 PREDICTED: pentatricopeptide repeat-containing pr... 50 4e-07
XP_015973782.1 PREDICTED: pentatricopeptide repeat-containing pr... 50 4e-07
XP_015973783.1 PREDICTED: pentatricopeptide repeat-containing pr... 50 4e-07
XP_014509676.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 5e-07
XP_016166768.1 PREDICTED: pentatricopeptide repeat-containing pr... 50 4e-06
ACU19790.1 unknown [Glycine max] 48 8e-06
>XP_004516703.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Cicer arietinum]
Length = 308
Score = 89.4 bits (220), Expect = 2e-18
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
+YIKGKR+RIKVQGQSN+V+KY+ K DNVQ NSG+ EDD SEETSE+ DDEQF QD
Sbjct: 228 RYIKGKRVRIKVQGQSNKVDKYIRKRDNVQLNSGLIEDDSSEETSELTDDEQFEQD 283
>GAU26980.1 hypothetical protein TSUD_290300 [Trifolium subterraneum]
Length = 263
Score = 87.8 bits (216), Expect(2) = 4e-18
Identities = 38/56 (67%), Positives = 49/56 (87%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
++IKGKR++IKVQGQSN V+KY+ KHDNV+P+SG+ +DD SEE SE+ DDEQF QD
Sbjct: 183 RFIKGKRVKIKVQGQSNYVDKYIRKHDNVEPDSGLRDDDSSEENSELTDDEQFEQD 238
Score = 30.8 bits (68), Expect(2) = 4e-18
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2
Query: 246 NATFMEPKQISDESSESTELVLDV 175
+ T MEP+QI ESSESTE LDV
Sbjct: 240 DVTHMEPEQIFYESSESTEPSLDV 263
>XP_013452335.1 PPR containing plant protein [Medicago truncatula] KEH26363.1 PPR
containing plant protein [Medicago truncatula]
Length = 354
Score = 89.0 bits (219), Expect = 5e-18
Identities = 39/56 (69%), Positives = 50/56 (89%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
+YIKGKR+RI+VQGQ N+V++Y+ KHDNVQPNSG+ E+D SEETSE+ +DEQF QD
Sbjct: 274 QYIKGKRVRIRVQGQPNKVDRYVRKHDNVQPNSGLREEDSSEETSELTNDEQFEQD 329
>KYP61906.1 Pentatricopeptide repeat-containing protein At4g21190 family
[Cajanus cajan]
Length = 309
Score = 72.0 bits (175), Expect = 5e-12
Identities = 33/57 (57%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRS-EETSEVIDDEQFNQD 254
+YI+GKR+++KVQ QSNQVN YL +H+NV+ N +N + +S EETSE+IDD+Q QD
Sbjct: 228 RYIRGKRVKVKVQVQSNQVNTYLKRHENVETNLDLNNNYKSEEETSEIIDDQQLRQD 284
>KHN42466.1 Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 343
Score = 65.9 bits (159), Expect(2) = 3e-10
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
+YI+GKR+++KV+ QS+QVN Y+ +H NV+PNS +N+D RS E + D+Q QD
Sbjct: 228 RYIRGKRVKVKVEVQSSQVNTYIERHGNVEPNSDLNKDYRSSEKTSETVDQQLRQD 283
Score = 25.8 bits (55), Expect(2) = 3e-10
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 234 MEPKQISDESSESTELVLDV 175
ME +QISD+S +S E +LDV
Sbjct: 324 MELEQISDDSYDSIEPILDV 343
>XP_006587265.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Glycine max] XP_006587266.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g21190
[Glycine max] KRH38338.1 hypothetical protein
GLYMA_09G129400 [Glycine max] KRH38339.1 hypothetical
protein GLYMA_09G129400 [Glycine max]
Length = 343
Score = 65.9 bits (159), Expect(2) = 3e-10
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
+YI+GKR+++KV+ QS+QVN Y+ +H NV+PNS +N+D RS E + D+Q QD
Sbjct: 228 RYIRGKRVKVKVEVQSSQVNTYIERHGNVEPNSDLNKDYRSSEKTSETVDQQLRQD 283
Score = 25.8 bits (55), Expect(2) = 3e-10
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 234 MEPKQISDESSESTELVLDV 175
ME +QISD+S +S E +LDV
Sbjct: 324 MELEQISDDSYDSIEPILDV 343
>ACU23645.1 unknown [Glycine max]
Length = 343
Score = 65.9 bits (159), Expect(2) = 3e-10
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
+YI+GKR+++KV+ QS+QVN Y+ +H NV+PNS +N+D RS E + D+Q QD
Sbjct: 228 RYIRGKRVKVKVEVQSSQVNTYIERHGNVEPNSDLNKDYRSSEKTSETVDQQLRQD 283
Score = 25.8 bits (55), Expect(2) = 3e-10
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 234 MEPKQISDESSESTELVLDV 175
ME +QISD+S +S E +LDV
Sbjct: 324 MELEQISDDSYDSIEPILDV 343
>XP_003548152.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Glycine max] XP_006599545.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g21190
[Glycine max] KHN09283.1 Pentatricopeptide
repeat-containing protein [Glycine soja] KRH08830.1
hypothetical protein GLYMA_16G177300 [Glycine max]
KRH08831.1 hypothetical protein GLYMA_16G177300 [Glycine
max]
Length = 343
Score = 67.0 bits (162), Expect = 4e-10
Identities = 31/57 (54%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDR-SEETSEVIDDEQFNQD 254
+YI+GKR+++KV+ QSNQVN Y+ +H NV+PNS +N++ R SE+TSE++ D+Q QD
Sbjct: 228 RYIRGKRVKVKVEVQSNQVNTYIERHGNVEPNSDLNKNYRLSEKTSEIV-DQQLRQD 283
>XP_007152143.1 hypothetical protein PHAVU_004G106000g [Phaseolus vulgaris]
ESW24137.1 hypothetical protein PHAVU_004G106000g
[Phaseolus vulgaris]
Length = 344
Score = 65.1 bits (157), Expect(2) = 1e-09
Identities = 31/58 (53%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDR-SEETSEVIDDEQFNQDD 251
+Y +GKRI++KVQ QS QVN + + +NV+P+S +N + R SEETSE+IDD+Q QD+
Sbjct: 228 RYSRGKRIKVKVQSQSTQVNTWTKRLENVEPDSDLNNNYRSSEETSEMIDDQQLEQDN 285
Score = 25.0 bits (53), Expect(2) = 1e-09
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 261 IRMMLNATFMEPKQISDESSESTELVLDV 175
+R + T ME +QISD S + E +LDV
Sbjct: 316 LRQDADLTSMELEQISDSSYDIMEPILDV 344
>XP_019449705.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Lupinus angustifolius] XP_019449706.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Lupinus angustifolius] XP_019449707.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Lupinus angustifolius] OIW08062.1
hypothetical protein TanjilG_20163 [Lupinus
angustifolius]
Length = 297
Score = 63.9 bits (154), Expect = 4e-09
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
++I+GKR++IKVQ Q N+V Y K++N++PNS ++EDD SE+ S +I DEQF +D
Sbjct: 228 RFIRGKRVKIKVQDQPNRVISYREKNENIEPNSDLDEDDTSEDISGII-DEQFEKD 282
>XP_017437793.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Vigna angularis] KOM55192.1 hypothetical protein
LR48_Vigan10g108400 [Vigna angularis] BAU02224.1
hypothetical protein VIGAN_11170500 [Vigna angularis
var. angularis]
Length = 336
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINED-DRSEETSEVIDDEQFNQDD 251
+Y +G+RI++KVQ S QVN Y + +NV+ +S +N++ + SEETS +IDD+Q D+
Sbjct: 228 RYSRGRRIKVKVQPPSKQVNTYTERRENVEQDSDLNKNYESSEETSGIIDDQQVRHDN 285
Score = 25.0 bits (53), Expect(2) = 3e-07
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 261 IRMMLNATFMEPKQISDESSESTELVLDV 175
+R + T E +QIS+ S+ S E +LDV
Sbjct: 308 LRQEADVTSNELEQISENSNHSMETILDV 336
>XP_015973781.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like isoform X1 [Arachis duranensis]
Length = 328
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = -1
Query: 421 KYIKG-KRIRIKVQGQSNQVNKYLGKHD---NVQPNSGINEDDRSEETSEVID-DEQFNQ 257
+Y+KG +RI++KV GQ Q N G N +PN ++++D SEETSE+ + DEQFNQ
Sbjct: 243 RYVKGGRRIKVKVSGQPYQGNYREGNEHANANGEPNLDLDDNDTSEETSELEEVDEQFNQ 302
Query: 256 D 254
D
Sbjct: 303 D 303
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2
Query: 246 NATFMEPKQISDESSESTELVLDV 175
NA ME KQISD+S E+ E VLDV
Sbjct: 305 NARTMESKQISDDSFETKESVLDV 328
>XP_015948346.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Arachis duranensis]
Length = 313
Score = 50.1 bits (118), Expect(2) = 4e-07
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = -1
Query: 421 KYIKG-KRIRIKVQGQSNQVNKYLGKHD---NVQPNSGINEDDRSEETSEVID-DEQFNQ 257
+Y+KG +RI+IKV GQ Q N G N +PN ++++D SEETSE+ + DEQFNQ
Sbjct: 228 RYVKGGRRIKIKVSGQPYQGNYREGNEHAKLNGEPNLDLDDNDTSEETSELEEVDEQFNQ 287
Query: 256 D 254
D
Sbjct: 288 D 288
Score = 31.2 bits (69), Expect(2) = 4e-07
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2
Query: 246 NATFMEPKQISDESSESTELVLDV 175
NA ME KQISD+S E+ E VLDV
Sbjct: 290 NARTMESKQISDDSFETKEPVLDV 313
>XP_015973782.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like isoform X2 [Arachis duranensis]
Length = 313
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = -1
Query: 421 KYIKG-KRIRIKVQGQSNQVNKYLGKHD---NVQPNSGINEDDRSEETSEVID-DEQFNQ 257
+Y+KG +RI++KV GQ Q N G N +PN ++++D SEETSE+ + DEQFNQ
Sbjct: 228 RYVKGGRRIKVKVSGQPYQGNYREGNEHANANGEPNLDLDDNDTSEETSELEEVDEQFNQ 287
Query: 256 D 254
D
Sbjct: 288 D 288
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2
Query: 246 NATFMEPKQISDESSESTELVLDV 175
NA ME KQISD+S E+ E VLDV
Sbjct: 290 NARTMESKQISDDSFETKESVLDV 313
>XP_015973783.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like isoform X3 [Arachis duranensis]
XP_015973784.1 PREDICTED: pentatricopeptide
repeat-containing protein At4g21190-like isoform X3
[Arachis duranensis]
Length = 310
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = -1
Query: 421 KYIKG-KRIRIKVQGQSNQVNKYLGKHD---NVQPNSGINEDDRSEETSEVID-DEQFNQ 257
+Y+KG +RI++KV GQ Q N G N +PN ++++D SEETSE+ + DEQFNQ
Sbjct: 225 RYVKGGRRIKVKVSGQPYQGNYREGNEHANANGEPNLDLDDNDTSEETSELEEVDEQFNQ 284
Query: 256 D 254
D
Sbjct: 285 D 285
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2
Query: 246 NATFMEPKQISDESSESTELVLDV 175
NA ME KQISD+S E+ E VLDV
Sbjct: 287 NARTMESKQISDDSFETKESVLDV 310
>XP_014509676.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Vigna radiata var. radiata] XP_014509755.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g21190
[Vigna radiata var. radiata]
Length = 336
Score = 55.8 bits (133), Expect(2) = 5e-07
Identities = 25/58 (43%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -1
Query: 421 KYIKGKRIRIKVQGQSNQVNKYLGKHDNVQPNSGINED-DRSEETSEVIDDEQFNQDD 251
+Y +G+RI++KVQ S Q+N Y + +NV+ +S +N++ + SEETS +IDD+Q D+
Sbjct: 228 RYSRGRRIKVKVQAPSKQINTYTERLENVEQDSDLNKNYESSEETSGIIDDQQVTHDN 285
Score = 25.0 bits (53), Expect(2) = 5e-07
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 261 IRMMLNATFMEPKQISDESSESTELVLDV 175
+R + T E +QIS+ S+ S E +LDV
Sbjct: 308 LRQEADVTSNELEQISENSNHSMETILDV 336
>XP_016166768.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Arachis ipaensis] XP_016166769.1
PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Arachis ipaensis]
Length = 313
Score = 49.7 bits (117), Expect(2) = 4e-06
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = -1
Query: 421 KYIKG-KRIRIKVQGQSNQVNKYLGKHD---NVQPNSGINEDDRSEETSEVID-DEQFNQ 257
+Y+KG +RI++KV GQ Q N G N +PN ++++D SEETSE+ + DEQFNQ
Sbjct: 228 RYVKGGRRIKVKVSGQPYQGNYREGNEHAKANGEPNLDLDDNDTSEETSELEEVDEQFNQ 287
Query: 256 D 254
D
Sbjct: 288 D 288
Score = 28.1 bits (61), Expect(2) = 4e-06
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2
Query: 246 NATFMEPKQISDESSESTELVLDV 175
NA ME KQIS +S E+ E VLDV
Sbjct: 290 NARTMESKQISVDSFETKESVLDV 313
>ACU19790.1 unknown [Glycine max]
Length = 119
Score = 48.1 bits (113), Expect(3) = 8e-06
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -1
Query: 406 KRIRIKVQGQSNQVNKYLGKHDNVQPNSGINEDDRSEETSEVIDDEQFNQD 254
K + + + QS+QVN Y+ +H NV+PNS +N+D RS E + D+Q QD
Sbjct: 9 KACKSQSEVQSSQVNTYIERHGNVEPNSDLNKDYRSSEKTSETVDQQLRQD 59
Score = 25.8 bits (55), Expect(3) = 8e-06
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 234 MEPKQISDESSESTELVLDV 175
ME +QISD+S +S E +LDV
Sbjct: 100 MELEQISDDSYDSIEPILDV 119
Score = 22.3 bits (46), Expect(3) = 8e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 425 LQIHQRKAHKNQ 390
+QIHQRKA K+Q
Sbjct: 3 IQIHQRKACKSQ 14