BLASTX nr result

ID: Glycyrrhiza28_contig00022255 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00022255
         (311 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004503341.1 PREDICTED: putative pentatricopeptide repeat-cont...    87   8e-18
XP_003630975.1 PPR containing plant-like protein [Medicago trunc...    84   1e-16
XP_019422754.1 PREDICTED: putative pentatricopeptide repeat-cont...    70   5e-12
GAU12887.1 hypothetical protein TSUD_73740 [Trifolium subterraneum]    64   9e-10
XP_007160443.1 hypothetical protein PHAVU_002G3226001g [Phaseolu...    58   1e-07
XP_014506801.1 PREDICTED: putative pentatricopeptide repeat-cont...    54   4e-06

>XP_004503341.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 isoform X1 [Cicer arietinum] XP_012572060.1
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At3g23330 isoform X2 [Cicer arietinum]
          Length = 705

 Score = 87.0 bits (214), Expect = 8e-18
 Identities = 52/105 (49%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -3

Query: 309 STEQVITRILRNPNRRVS--TRQAKQLHGHMVRTKGTSHPDNXXXXXXXXXXXXXXXXXX 136
           STE +IT ILRNP R VS  TRQAKQLH H+V+TKGT H DN                  
Sbjct: 4   STEHIITNILRNPKRTVSVSTRQAKQLHAHIVKTKGTFHDDNILVLSLYSNLNLLHHSLH 63

Query: 135 XXXXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFNSMRSLGVSPN 1
                           LIKCYTSH+L HLS SSF SMRSL V  N
Sbjct: 64  LFNSLPSPPPPLAWSSLIKCYTSHSLLHLSFSSFKSMRSLSVPAN 108


>XP_003630975.1 PPR containing plant-like protein [Medicago truncatula] AET05451.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 701

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 50/106 (47%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
 Frame = -3

Query: 309 STEQVITRILRN-PNRR--VSTRQAKQLHGHMVRTKGTSHPDNXXXXXXXXXXXXXXXXX 139
           ST+  I++ILR  PN+   VSTRQAKQLH H+V+TKGT H DN                 
Sbjct: 4   STQHTISKILRKTPNKTLSVSTRQAKQLHAHIVKTKGTLHSDNILVLSLYSNLNLLQHSL 63

Query: 138 XXXXXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFNSMRSLGVSPN 1
                            +IKCYTSH+L HLS SSFNSMRSL V PN
Sbjct: 64  HLFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPN 109


>XP_019422754.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Lupinus angustifolius]
          Length = 722

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 39/103 (37%), Positives = 53/103 (51%)
 Frame = -3

Query: 309 STEQVITRILRNPNRRVSTRQAKQLHGHMVRTKGTSHPDNXXXXXXXXXXXXXXXXXXXX 130
           ST+ +I  I++NPN  +ST  AKQLH H+++TKGT HP +                    
Sbjct: 5   STQNLIKTIIKNPNPTISTFHAKQLHAHILKTKGTFHP-HHSSILSLYSSLKLLHDSLLL 63

Query: 129 XXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFNSMRSLGVSPN 1
                         +IKCY SH L H SL+SFN MR+LG+ P+
Sbjct: 64  FNTLHSPPPLAWISIIKCYISHGLLHSSLASFNKMRALGIYPD 106


>GAU12887.1 hypothetical protein TSUD_73740 [Trifolium subterraneum]
          Length = 424

 Score = 63.9 bits (154), Expect = 9e-10
 Identities = 41/103 (39%), Positives = 49/103 (47%)
 Frame = -3

Query: 309 STEQVITRILRNPNRRVSTRQAKQLHGHMVRTKGTSHPDNXXXXXXXXXXXXXXXXXXXX 130
           +T+ +I  ILR  + +  T  AKQLH H+V TKGT H DN                    
Sbjct: 5   TTQHMINNILRKNSNK--TLSAKQLHAHIVITKGTFHNDNILVLSLYSNLNLLHHSLHLF 62

Query: 129 XXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFNSMRSLGVSPN 1
                         LIKC+TS +L H S SSFNSMRSL V PN
Sbjct: 63  NSLPSPPPPLAWSSLIKCFTSRSLLHHSFSSFNSMRSLSVPPN 105


>XP_007160443.1 hypothetical protein PHAVU_002G3226001g [Phaseolus vulgaris]
           ESW32437.1 hypothetical protein PHAVU_002G3226001g
           [Phaseolus vulgaris]
          Length = 683

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 37/103 (35%), Positives = 48/103 (46%)
 Frame = -3

Query: 309 STEQVITRILRNPNRRVSTRQAKQLHGHMVRTKGTSHPDNXXXXXXXXXXXXXXXXXXXX 130
           ST+ V  RILRNPN  VST QAKQLH  +V+ + T H  +                    
Sbjct: 3   STQSVTRRILRNPNTVVSTCQAKQLHAQIVKARATPHSHS-------------------- 42

Query: 129 XXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFNSMRSLGVSPN 1
                         +IKCY +H L   SL++FN MR+ GV P+
Sbjct: 43  ---------LAWLCIIKCYVAHGLLRHSLAAFNLMRASGVCPH 76


>XP_014506801.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Vigna radiata var. radiata]
          Length = 685

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 35/103 (33%), Positives = 46/103 (44%)
 Frame = -3

Query: 309 STEQVITRILRNPNRRVSTRQAKQLHGHMVRTKGTSHPDNXXXXXXXXXXXXXXXXXXXX 130
           ST+    RILRNPN  VS   AKQLH  +V+ + T H                       
Sbjct: 3   STQSATRRILRNPNTVVSAFHAKQLHAQIVKARATPH----------------------- 39

Query: 129 XXXXXXXXXXXXXXLIKCYTSHNLPHLSLSSFNSMRSLGVSPN 1
                         +IKCYT++ L   SL++FN MR+ GVSP+
Sbjct: 40  ------SLSLAWVCIIKCYTAYGLLRHSLTTFNLMRASGVSPD 76


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