BLASTX nr result

ID: Glycyrrhiza28_contig00022138 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00022138
         (329 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007157883.1 hypothetical protein PHAVU_002G106000g [Phaseolus...    65   7e-10
XP_004512166.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   1e-08
XP_014520159.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   7e-08
XP_017408480.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   7e-08
XP_003516541.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   6e-07
XP_003612228.1 PPR containing plant-like protein [Medicago trunc...    55   2e-06
KRH28836.1 hypothetical protein GLYMA_11G079700, partial [Glycin...    54   5e-06
KHN41876.1 Pentatricopeptide repeat-containing protein [Glycine ...    54   5e-06

>XP_007157883.1 hypothetical protein PHAVU_002G106000g [Phaseolus vulgaris]
           ESW29877.1 hypothetical protein PHAVU_002G106000g
           [Phaseolus vulgaris]
          Length = 583

 Score = 64.7 bits (156), Expect = 7e-10
 Identities = 44/96 (45%), Positives = 52/96 (54%)
 Frame = -2

Query: 289 MARVSFTRQLVPFRTTLFKRXXXXXXXXXXXXXXXXXXXXXXSRFVSEEKRTPSVLIFTP 110
           MARVS TRQ  PFR+TL  R                            E + P   +F+ 
Sbjct: 1   MARVS-TRQRFPFRSTLLTRPITTTTTRTSSSSLT-------------EAQNPRFSLFS- 45

Query: 109 LQFEALLHTSCQSARHLLQIQALLITSTLSRNPFLS 2
            QFE LL  SC+SARHLLQIQALL+TS+L RNPFL+
Sbjct: 46  -QFETLLRNSCRSARHLLQIQALLVTSSLFRNPFLA 80


>XP_004512166.1 PREDICTED: pentatricopeptide repeat-containing protein At3g51320
           [Cicer arietinum]
          Length = 598

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -2

Query: 289 MARVSFTRQLVPFRTTLFKRXXXXXXXXXXXXXXXXXXXXXXSRFVSEEKRTPSVLIFTP 110
           MARVS TR L PFR TLF R                          S+E +T ++   T 
Sbjct: 1   MARVS-TRHLFPFRNTLFSRSITNTPPSPSSSSSPS----------SQENKT-TLSFLTH 48

Query: 109 LQFEALLHTS-CQSARHLLQIQALLITSTLSRNPFL 5
           L F++LL T  CQ+ RHLLQIQALLITS+  RNPFL
Sbjct: 49  LHFQSLLQTVYCQTTRHLLQIQALLITSSFYRNPFL 84


>XP_014520159.1 PREDICTED: pentatricopeptide repeat-containing protein At3g51320
           [Vigna radiata var. radiata]
          Length = 573

 Score = 58.9 bits (141), Expect = 7e-08
 Identities = 41/96 (42%), Positives = 48/96 (50%)
 Frame = -2

Query: 289 MARVSFTRQLVPFRTTLFKRXXXXXXXXXXXXXXXXXXXXXXSRFVSEEKRTPSVLIFTP 110
           MAR+S TRQ  PFR T   R                            E + P   +F+ 
Sbjct: 1   MARIS-TRQRFPFRRTFLTRPITTTRTSSSSLT---------------EAKKPGFSLFS- 43

Query: 109 LQFEALLHTSCQSARHLLQIQALLITSTLSRNPFLS 2
            QFE LL  SCQSARHL QIQALL+TS+L RN FL+
Sbjct: 44  -QFETLLRNSCQSARHLFQIQALLVTSSLFRNHFLA 78


>XP_017408480.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Vigna angularis] XP_017408481.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Vigna angularis] KOM28097.1 hypothetical
           protein LR48_Vigan499s004100 [Vigna angularis]
           KOM28099.1 hypothetical protein LR48_Vigan499s004300
           [Vigna angularis] BAT99948.1 hypothetical protein
           VIGAN_10149300 [Vigna angularis var. angularis]
          Length = 573

 Score = 58.9 bits (141), Expect = 7e-08
 Identities = 42/96 (43%), Positives = 48/96 (50%)
 Frame = -2

Query: 289 MARVSFTRQLVPFRTTLFKRXXXXXXXXXXXXXXXXXXXXXXSRFVSEEKRTPSVLIFTP 110
           MAR S TRQ  PFR T   R                            E + P   +F+ 
Sbjct: 1   MARFS-TRQRFPFRRTFLTRPITSTRTSSSSLT---------------EAKKPGFSLFS- 43

Query: 109 LQFEALLHTSCQSARHLLQIQALLITSTLSRNPFLS 2
            QFE LL  SCQSARHLLQIQALL+TS+L RN FL+
Sbjct: 44  -QFETLLRNSCQSARHLLQIQALLVTSSLFRNHFLA 78


>XP_003516541.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max] KHN36010.1
           Pentatricopeptide repeat-containing protein [Glycine
           soja] KRH76621.1 hypothetical protein GLYMA_01G163800
           [Glycine max]
          Length = 579

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -2

Query: 103 FEALLHTSCQSARHLLQIQALLITSTLSRNPFLS 2
           FEALL  SCQ+ARHLLQIQALL+TS+L RNP+L+
Sbjct: 43  FEALLQNSCQNARHLLQIQALLVTSSLFRNPYLA 76


>XP_003612228.1 PPR containing plant-like protein [Medicago truncatula] AES95186.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 665

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 37/97 (38%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 MARVSFTRQLVPFRTTLFKRXXXXXXXXXXXXXXXXXXXXXXSRFVSEEKRTPSVLIFTP 110
           MAR+ ++R   PFR   F R                          S    +PS    T 
Sbjct: 1   MARI-YSRNFFPFRNPFFSRP-----------------------ITSSSSSSPSSQFLTH 36

Query: 109 LQFEALLHTS-CQSARHLLQIQALLITSTLSRNPFLS 2
           L F++LL  S CQ+  HLLQIQ+LLITS+  RNPFLS
Sbjct: 37  LHFQSLLQPSHCQTTHHLLQIQSLLITSSFYRNPFLS 73


>KRH28836.1 hypothetical protein GLYMA_11G079700, partial [Glycine max]
          Length = 492

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -2

Query: 103 FEALLHTSCQSARHLLQIQALLITSTLSRNPFLS 2
           F+ALL  SC++ARHLLQ+QALL+TS+L RNPFL+
Sbjct: 7   FDALLQNSCRNARHLLQMQALLVTSSLFRNPFLA 40


>KHN41876.1 Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 674

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -2

Query: 103 FEALLHTSCQSARHLLQIQALLITSTLSRNPFLS 2
           F+ALL  SC++ARHLLQ+QALL+TS+L RNPFL+
Sbjct: 194 FDALLQNSCRNARHLLQMQALLVTSSLFRNPFLA 227


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