BLASTX nr result
ID: Glycyrrhiza28_contig00021824
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00021824
(457 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACS44168.1 integration host factor (IHF) like DNA-binding protei... 254 1e-84
WP_043768370.1 integration host factor subunit beta [Methylobact... 196 1e-62
WP_036360924.1 integration host factor subunit beta [Microvirga ... 120 1e-32
KNY20265.1 integration host factor subunit beta [Methylobacteriu... 120 1e-32
WP_036354203.1 integration host factor subunit beta [Microvirga ... 119 5e-32
WP_009490463.1 integration host factor subunit beta [Microvirga ... 119 5e-32
WP_027314528.1 integration host factor subunit beta [Microvirga ... 118 7e-32
ANY78753.1 integration host factor subunit beta [Microvirga sp. ... 117 1e-31
WP_007568545.1 integration host factor subunit beta [Methylobact... 117 3e-31
WP_047188125.1 integration host factor subunit beta [Microvirga ... 116 4e-31
SDO55523.1 integration host factor subunit beta [Methylobacteriu... 116 5e-31
SCY51847.1 integration host factor subunit beta [Microvirga guan... 116 6e-31
WP_010687684.1 integration host factor subunit beta [Methylobact... 115 9e-31
WP_043351019.1 MULTISPECIES: integration host factor subunit bet... 115 2e-30
WP_012319412.1 MULTISPECIES: integration host factor subunit bet... 114 5e-30
SDA29992.1 integration host factor subunit beta [Methylobacteriu... 114 5e-30
WP_010683170.1 integration host factor subunit beta [Methylobact... 114 5e-30
WP_007559930.1 MULTISPECIES: integration host factor subunit bet... 114 5e-30
SDO32565.1 integration host factor subunit beta [Methylobacteriu... 113 6e-30
WP_052341813.1 integration host factor subunit beta [Salinarimon... 114 7e-30
>ACS44168.1 integration host factor (IHF) like DNA-binding protein (plasmid)
[Methylobacterium extorquens AM1]
Length = 163
Score = 254 bits (648), Expect = 1e-84
Identities = 130/148 (87%), Positives = 131/148 (88%)
Frame = +2
Query: 2 PTMPRPVTHSILGLMRKRSGALFEXXXXXXXXXXXXXXXXXSCSWPPMIRSEIVTRLAAQ 181
PTMPRPVTHSILGLMRKRSGALFE SCSWPPMIRSE+VTRLAAQ
Sbjct: 12 PTMPRPVTHSILGLMRKRSGALFERRGLARGHGRRLKALGGSCSWPPMIRSELVTRLAAQ 71
Query: 182 NPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQGRNPRTGESVLVA 361
NPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQGRNPRTGESVLVA
Sbjct: 72 NPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQGRNPRTGESVLVA 131
Query: 362 EKKAVQFRPGKGMRQRLKAMTPDALPAS 445
EKKAVQFRPGKGMRQRLKAMTPDALPAS
Sbjct: 132 EKKAVQFRPGKGMRQRLKAMTPDALPAS 159
>WP_043768370.1 integration host factor subunit beta [Methylobacterium extorquens]
Length = 105
Score = 196 bits (499), Expect = 1e-62
Identities = 100/101 (99%), Positives = 101/101 (100%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MIRSE+VTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ
Sbjct: 1 MIRSELVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS
Sbjct: 61 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 101
>WP_036360924.1 integration host factor subunit beta [Microvirga lupini]
Length = 104
Score = 120 bits (301), Expect = 1e-32
Identities = 60/101 (59%), Positives = 74/101 (73%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEKIVNAILDTIADALARGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGESV ++EK F+ GK MRQRL A P L A+
Sbjct: 61 GRNPRTGESVSISEKVVPVFKTGKEMRQRLNAPAPKVLKAA 101
>KNY20265.1 integration host factor subunit beta [Methylobacterium sp. ARG-1]
Length = 97
Score = 120 bits (300), Expect = 1e-32
Identities = 59/96 (61%), Positives = 71/96 (73%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MIRSE+V R+A QNPHLY KD +AVV A+L RI ALV GDRVE+RGFGAF + AR
Sbjct: 1 MIRSELVARIAEQNPHLYAKDVDAVVDAILDRIGAALVDGDRVELRGFGAFEVRHQEARA 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPD 430
RNPRTG++V V + A+ FRPGK MR +L A+ PD
Sbjct: 61 ARNPRTGQAVEVEARTAIHFRPGKAMRAQLNALAPD 96
>WP_036354203.1 integration host factor subunit beta [Microvirga sp. BSC39]
KFG67994.1 integration host factor subunit beta
[Microvirga sp. BSC39]
Length = 104
Score = 119 bits (297), Expect = 5e-32
Identities = 59/101 (58%), Positives = 74/101 (73%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEKIVNAILDTIADALSRGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGESV ++EK F+ GK MRQRL A P + A+
Sbjct: 61 GRNPRTGESVSISEKVVPVFKTGKEMRQRLNAPAPKVMKAA 101
>WP_009490463.1 integration host factor subunit beta [Microvirga lotononidis]
EIM29066.1 integration host factor, beta subunit
[Microvirga lotononidis]
Length = 104
Score = 119 bits (297), Expect = 5e-32
Identities = 59/101 (58%), Positives = 74/101 (73%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEKIVNAILDTIGDALARGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGE+V ++EK F+ GK MRQRL A P L A+
Sbjct: 61 GRNPRTGEAVSISEKVVPVFKTGKEMRQRLNAPAPKVLKAA 101
>WP_027314528.1 integration host factor subunit beta [Microvirga flocculans]
Length = 104
Score = 118 bits (296), Expect = 7e-32
Identities = 58/101 (57%), Positives = 74/101 (73%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEKIVNAILDTIADALARGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGE+V ++EK F+ GK MRQRL A P + A+
Sbjct: 61 GRNPRTGEAVSISEKVVPVFKTGKEMRQRLNAPAPKVMKAA 101
>ANY78753.1 integration host factor subunit beta [Microvirga sp. V5/3M]
Length = 104
Score = 117 bits (294), Expect = 1e-31
Identities = 59/101 (58%), Positives = 73/101 (72%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEKIVNAILDTIGDALARGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTG SV ++EK F+ GK MRQRL A P L A+
Sbjct: 61 GRNPRTGASVSISEKVVPVFKTGKEMRQRLNAPAPKVLKAA 101
>WP_007568545.1 integration host factor subunit beta [Methylobacterium sp. GXF4]
EIZ81918.1 integration host factor, beta subunit
[Methylobacterium sp. GXF4]
Length = 108
Score = 117 bits (292), Expect = 3e-31
Identities = 62/101 (61%), Positives = 70/101 (69%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MIRSE+V R+A QNPHLY KD EAVV AVL RI AL GDRVE+RG G F ++ AR
Sbjct: 1 MIRSELVARVAEQNPHLYAKDVEAVVDAVLERIGTALADGDRVELRGLGMFKIRNRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGE+V V + VQF+PGK MR RL T D AS
Sbjct: 61 GRNPRTGETVQVEARAGVQFKPGKAMRARLNLSTIDTGAAS 101
>WP_047188125.1 integration host factor subunit beta [Microvirga vignae] KLK94083.1
integration host factor subunit beta [Microvirga vignae]
Length = 104
Score = 116 bits (291), Expect = 4e-31
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEKIVNAILDTIADALARGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGESV ++EK F+ GK MRQRL A + A+
Sbjct: 61 GRNPRTGESVSISEKVVPVFKTGKEMRQRLNAPASKVMKAA 101
>SDO55523.1 integration host factor subunit beta [Methylobacterium
phyllostachyos]
Length = 108
Score = 116 bits (291), Expect = 5e-31
Identities = 57/90 (63%), Positives = 69/90 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MIRSE+V R+A QNP+LY +D +AVV A+L RI AL GDRVE+R FG F T+D AR
Sbjct: 1 MIRSELVARIAEQNPYLYARDAQAVVDAILDRIATALADGDRVELRDFGTFETRDREART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRL 412
GRNPRTG+SV VA K+ V+FRPGK +R RL
Sbjct: 61 GRNPRTGQSVAVAAKRDVRFRPGKALRARL 90
>SCY51847.1 integration host factor subunit beta [Microvirga guangxiensis]
Length = 104
Score = 116 bits (290), Expect = 6e-31
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V +++ QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVLKISEQNPHLYQRDVEKIVNAILDTIADALARGDRVELRGFGAFSVKKRDART 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTPDALPAS 445
GRNPRTGESV ++EK F+ GK MRQRL A L A+
Sbjct: 61 GRNPRTGESVSISEKVVPVFKTGKEMRQRLNAPASKVLKAA 101
>WP_010687684.1 integration host factor subunit beta [Methylobacterium
mesophilicum] EMS39065.1 Hypothetical protein
MmSR116_5956 [Methylobacterium mesophilicum SR1.6/6]
Length = 109
Score = 115 bits (289), Expect = 9e-31
Identities = 58/104 (55%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MIRSE++TR+A QNPHLY KD EAVVS +LA+I AL +GDRVE+R FG+F+TK+++ R
Sbjct: 1 MIRSELITRIAKQNPHLYAKDVEAVVSVILAQIAAALTSGDRVELRDFGSFATKELQGRT 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKAMTP--DALPASP 448
RNP+TG V V K ++ F+PGK MR RL T D P+ P
Sbjct: 61 ARNPKTGAVVSVETKLSIAFKPGKAMRVRLNRPTTRGDGDPSQP 104
>WP_043351019.1 MULTISPECIES: integration host factor subunit beta [Bacteria]
AIQ90640.1 integration host factor, beta subunit
[Methylobacterium oryzae CBMB20] KOX43025.1 integration
host factor subunit beta [Streptomyces
purpurogeneiscleroticus] SFG63666.1 integration host
factor subunit beta [Methylobacterium phyllosphaerae]
SFU85023.1 integration host factor subunit beta
[Methylobacterium sp. UNCCL125] APT31350.1 DNA-binding
protein HU-alpha [Methylobacterium phyllosphaerae]
Length = 103
Score = 115 bits (287), Expect = 2e-30
Identities = 57/92 (61%), Positives = 70/92 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V R+A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR+
Sbjct: 1 MIKSELVLRIAEQNPHLYQRDVEILVNAILDTISDALARGDRVELRGFGAFSVKRREARR 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKA 418
GRNPRTG +V V+EK F+ GK MRQRL A
Sbjct: 61 GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNA 92
>WP_012319412.1 MULTISPECIES: integration host factor subunit beta [Bacteria]
ACB24439.1 integration host factor, beta subunit
[Methylobacterium radiotolerans JCM 2831] KIU33690.1
integration host factor subunit beta [Methylobacterium
radiotolerans] GAN50327.1 integration host factor
subunit beta [Methylobacterium sp. ME121] KOX57130.1
integration host factor subunit beta [Asanoa ferruginea]
KQS71283.1 integration host factor subunit beta
[Methylobacterium sp. Leaf361] KTS12199.1 integration
host factor subunit beta [Methylobacterium
radiotolerans] KTS48155.1 integration host factor
subunit beta [Methylobacterium radiotolerans] KZC01728.1
Integration host factor subunit beta [Methylobacterium
radiotolerans] SEG67678.1 integration host factor
subunit beta [Methylobacterium sp. 190mf] SEH28847.1
integration host factor subunit beta [Methylobacterium
sp. 275MFSha3.1] SEN51207.1 integration host factor
subunit beta [Methylobacterium sp. UNC300MFChir4.1]
SFD29271.1 integration host factor subunit beta
[Methylobacterium sp. 13MFTsu3.1M2] SFT10699.1
integration host factor subunit beta [Methylobacterium
sp. yr668] ONF47843.1 integration host factor subunit
beta [Methylobacterium radiotolerans]
Length = 103
Score = 114 bits (284), Expect = 5e-30
Identities = 56/92 (60%), Positives = 70/92 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR+
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEILVNAILDTISDALARGDRVELRGFGAFSVKRREARR 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKA 418
GRNPRTG +V V+EK F+ GK MRQRL A
Sbjct: 61 GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNA 92
>SDA29992.1 integration host factor subunit beta [Methylobacterium sp.
UNC378MF]
Length = 103
Score = 114 bits (284), Expect = 5e-30
Identities = 56/92 (60%), Positives = 70/92 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR+
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEILVNAILDTISDALARGDRVELRGFGAFSVKRREARR 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKA 418
GRNPRTG +V V+EK F+ GK MRQRL A
Sbjct: 61 GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNA 92
>WP_010683170.1 integration host factor subunit beta [Methylobacterium
mesophilicum] EMS43167.1 integration host factor subunit
beta [Methylobacterium mesophilicum SR1.6/6]
Length = 103
Score = 114 bits (284), Expect = 5e-30
Identities = 56/92 (60%), Positives = 70/92 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR+
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEILVNAILDTISDALARGDRVELRGFGAFSVKRREARR 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKA 418
GRNPRTG +V V+EK F+ GK MRQRL A
Sbjct: 61 GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNA 92
>WP_007559930.1 MULTISPECIES: integration host factor subunit beta
[Methylobacterium] EIZ86189.1 integration host factor
subunit beta [Methylobacterium sp. GXF4] KNY23765.1
integration host factor subunit beta [Methylobacterium
sp. ARG-1] KST60257.1 integration host factor subunit
beta [Methylobacterium sp. GXS13] SFH98939.1 integration
host factor subunit beta [Methylobacterium brachiatum]
SFL97274.1 integration host factor subunit beta
[Methylobacterium pseudosasicola]
Length = 103
Score = 114 bits (284), Expect = 5e-30
Identities = 56/92 (60%), Positives = 70/92 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR+
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEILVNAILDTISDALARGDRVELRGFGAFSVKRREARK 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKA 418
GRNPRTG +V V+EK F+ GK MRQRL A
Sbjct: 61 GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNA 92
>SDO32565.1 integration host factor subunit beta [Methylobacterium
phyllostachyos]
Length = 103
Score = 113 bits (283), Expect = 6e-30
Identities = 56/92 (60%), Positives = 70/92 (76%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V ++A QNPHLY++D E +V+A+L I DAL GDRVE+RGFGAFS K AR+
Sbjct: 1 MIKSELVLKIAEQNPHLYQRDVEILVNAILDTISDALAHGDRVELRGFGAFSVKRREARR 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRLKA 418
GRNPRTG +V V+EK F+ GK MRQRL A
Sbjct: 61 GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNA 92
>WP_052341813.1 integration host factor subunit beta [Salinarimonas rosea]
Length = 117
Score = 114 bits (284), Expect = 7e-30
Identities = 57/90 (63%), Positives = 67/90 (74%)
Frame = +2
Query: 143 MIRSEIVTRLAAQNPHLYEKDCEAVVSAVLARIEDALVAGDRVEIRGFGAFSTKDIRARQ 322
MI+SE+V R+A QNPHLY++D E +V A+L I DAL GDRVE+RGFGAFS K AR
Sbjct: 1 MIKSELVMRIAEQNPHLYQRDVENIVGAILETIADALARGDRVELRGFGAFSVKRRDARM 60
Query: 323 GRNPRTGESVLVAEKKAVQFRPGKGMRQRL 412
GRNPRTGE+V VAEK F+ GK MR RL
Sbjct: 61 GRNPRTGETVAVAEKAIPVFKTGKEMRNRL 90