BLASTX nr result

ID: Glycyrrhiza28_contig00021793 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00021793
         (258 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFK40613.1 unknown [Medicago truncatula]                               59   3e-08
KRH39676.1 hypothetical protein GLYMA_09G213500 [Glycine max]          52   6e-06
KHN11834.1 Replication protein A 70 kDa DNA-binding subunit [Gly...    52   6e-06
XP_003533460.1 PREDICTED: replication protein A 70 kDa DNA-bindi...    52   6e-06
KHN16302.1 Replication protein A 70 kDa DNA-binding subunit [Gly...    52   8e-06

>AFK40613.1 unknown [Medicago truncatula]
          Length = 341

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 37/84 (44%), Positives = 44/84 (52%)
 Frame = -3

Query: 256 IIDLDVIRDKCDLIGEPVPAPKDIPAQSFRGGPIGRNQAAHHYRSDQLPQSGFPLMGPFF 77
           ++DL+VI DKCDLIG+P PAPK+ PA S          AA H  + Q             
Sbjct: 95  VVDLEVIMDKCDLIGKPDPAPKEAPALS----------AASHAGNVQSAAG--------- 135

Query: 76  REEKQEGKVTMGVNLTQGAIMTMC 5
           + E    K  M VNLTQGAIM MC
Sbjct: 136 QLESTAEKAVMAVNLTQGAIMKMC 159


>KRH39676.1 hypothetical protein GLYMA_09G213500 [Glycine max]
          Length = 720

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 256 IIDLDVIRDKCDLIGEPVPAPKDIPAQSFRG 164
           I+DLDV+ DKC+LIGEPVPAPKD P +S  G
Sbjct: 97  IVDLDVVLDKCELIGEPVPAPKDAPTESATG 127


>KHN11834.1 Replication protein A 70 kDa DNA-binding subunit [Glycine soja]
          Length = 866

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 256 IIDLDVIRDKCDLIGEPVPAPKDIPAQSFRG 164
           I+DLDV+ DKC+LIGEPVPAPKD P +S  G
Sbjct: 97  IVDLDVVLDKCELIGEPVPAPKDAPTESATG 127


>XP_003533460.1 PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Glycine max] KRH39675.1 hypothetical protein
           GLYMA_09G213500 [Glycine max]
          Length = 894

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 256 IIDLDVIRDKCDLIGEPVPAPKDIPAQSFRG 164
           I+DLDV+ DKC+LIGEPVPAPKD P +S  G
Sbjct: 97  IVDLDVVLDKCELIGEPVPAPKDAPTESATG 127


>KHN16302.1 Replication protein A 70 kDa DNA-binding subunit [Glycine soja]
          Length = 510

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 256 IIDLDVIRDKCDLIGEPVPAPKDIPAQSFRG 164
           I+DLDV+ DKC+LIGEPVPAPKD P +S  G
Sbjct: 8   IVDLDVVLDKCELIGEPVPAPKDAPTKSATG 38


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