BLASTX nr result

ID: Glycyrrhiza28_contig00021521 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00021521
         (850 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003630096.2 PPR containing plant-like protein [Medicago trunc...    64   7e-08
XP_004504032.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   7e-08
KYP74716.1 hypothetical protein KK1_007404 [Cajanus cajan]             64   7e-08
XP_015890905.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   5e-06

>XP_003630096.2 PPR containing plant-like protein [Medicago truncatula] AET04572.2
           PPR containing plant-like protein [Medicago truncatula]
          Length = 476

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = +1

Query: 616 KKTSDQSETRELVCLPKQKISDKEPLVKTLNKYVKLVRTE 735
           K+T+DQSET+ELV L  +KISDKEPL+KTLNKYVKLVRTE
Sbjct: 43  KQTTDQSETQELVRLLTRKISDKEPLLKTLNKYVKLVRTE 82


>XP_004504032.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Cicer arietinum] XP_004504033.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g39620, chloroplastic [Cicer arietinum]
          Length = 477

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = +1

Query: 586 GSGSIRPKREKKTSDQSETRELVCLPKQKISDKEPLVKTLNKYVKLVRTE 735
           GS   R  R+K TS++SET+ELV L  +KIS+KEPLV TLNKYVKLVRTE
Sbjct: 34  GSNPTRLNRKKITSERSETQELVRLLTRKISEKEPLVTTLNKYVKLVRTE 83


>KYP74716.1 hypothetical protein KK1_007404 [Cajanus cajan]
          Length = 518

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 38/52 (73%), Positives = 40/52 (76%)
 Frame = +1

Query: 580 CGGSGSIRPKREKKTSDQSETRELVCLPKQKISDKEPLVKTLNKYVKLVRTE 735
           CG S    PKR KKTS  SE +ELV L  +KISDKEPLVKTLNKYVKLVRTE
Sbjct: 31  CGPS----PKR-KKTSHNSEAQELVRLLTRKISDKEPLVKTLNKYVKLVRTE 77


>XP_015890905.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Ziziphus jujuba]
          Length = 128

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +1

Query: 595 SIRPKREKKT-SDQSETRELVCLPKQKISDKEPLVKTLNKYVKLVRTE 735
           S RPKR+  + ++ SE  ELV L  +  SDKEPL+KTLNKYVK+VRTE
Sbjct: 49  STRPKRKSASKTESSEAEELVRLLMRSFSDKEPLLKTLNKYVKIVRTE 96


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