BLASTX nr result
ID: Glycyrrhiza28_contig00020910
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00020910
(259 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP69657.1 Copia protein, partial [Cajanus cajan] 147 1e-41
KYP69673.1 Copia protein, partial [Cajanus cajan] 147 1e-41
KYP60954.1 Copia protein, partial [Cajanus cajan] 143 4e-39
KYP54686.1 Retrovirus-related Pol polyprotein from transposon TN... 139 9e-39
KYP48238.1 Retrovirus-related Pol polyprotein from transposon TN... 133 4e-37
KYP54694.1 Retrovirus-related Pol polyprotein from transposon TN... 134 7e-37
KYP42467.1 Retrovirus-related Pol polyprotein from transposon TN... 132 1e-34
KYP36277.1 Copia protein [Cajanus cajan] 123 1e-33
ABD32582.1 Integrase, catalytic region; Zinc finger, CCHC-type; ... 128 1e-32
ABE88110.1 Reverse transcriptase (RNA-dependent DNA polymerase),... 127 4e-32
KYP49882.1 Copia protein, partial [Cajanus cajan] 122 1e-31
XP_013455251.1 hypothetical protein MTR_4g033045 [Medicago trunc... 116 5e-31
KYP35168.1 hypothetical protein KK1_043810 [Cajanus cajan] 112 9e-31
KYP74059.1 Retrovirus-related Pol polyprotein from transposon TN... 121 1e-30
KYP45449.1 Retrovirus-related Pol polyprotein from transposon TN... 112 4e-30
KYP78343.1 Retrovirus-related Pol polyprotein from transposon TN... 111 1e-29
CAN64335.1 hypothetical protein VITISV_001808 [Vitis vinifera] 119 1e-29
CAN74951.1 hypothetical protein VITISV_030567, partial [Vitis vi... 119 1e-29
EOY03245.1 Uncharacterized protein TCM_017953 [Theobroma cacao] 117 2e-29
CAN69203.1 hypothetical protein VITISV_023039 [Vitis vinifera] 118 3e-29
>KYP69657.1 Copia protein, partial [Cajanus cajan]
Length = 314
Score = 147 bits (370), Expect = 1e-41
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR IS++ KHNLVRGLP+LVY+S LCEACQKGKQVK+SF SKN VSTSRPLELLH+DLF
Sbjct: 147 LRLISRMKKHNLVRGLPSLVYQSNSLCEACQKGKQVKSSFESKNHVSTSRPLELLHIDLF 206
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GPT+TAS++GK+YGLVIVDDYTRWT
Sbjct: 207 GPTRTASISGKRYGLVIVDDYTRWT 231
>KYP69673.1 Copia protein, partial [Cajanus cajan]
Length = 327
Score = 147 bits (370), Expect = 1e-41
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR IS++ KHNLVRGLP+LVY+S LCEACQKGKQVK+SF SKN VSTSRPLELLH+DLF
Sbjct: 160 LRLISRMKKHNLVRGLPSLVYQSNSLCEACQKGKQVKSSFESKNHVSTSRPLELLHIDLF 219
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GPT+TAS++GK+YGLVIVDDYTRWT
Sbjct: 220 GPTRTASISGKRYGLVIVDDYTRWT 244
>KYP60954.1 Copia protein, partial [Cajanus cajan]
Length = 438
Score = 143 bits (360), Expect = 4e-39
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR ISKL KHNL+RGLP+LVY++ LCEACQKGKQVK+SF SKN VSTSRPLELLH+DLF
Sbjct: 354 LRLISKLIKHNLIRGLPSLVYQTNNLCEACQKGKQVKSSFESKNHVSTSRPLELLHVDLF 413
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GPT+ AS++GK+YGLVIVDDYTRWT
Sbjct: 414 GPTRIASVSGKRYGLVIVDDYTRWT 438
>KYP54686.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan] KYP54690.1 Retrovirus-related
Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 319
Score = 139 bits (351), Expect = 9e-39
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR I KL KHNLVRGLP+LVY++ LCEACQKGKQVK+SF SKN VSTSR LE LH+DLF
Sbjct: 9 LRLILKLKKHNLVRGLPSLVYQTNSLCEACQKGKQVKSSFKSKNYVSTSRRLEFLHIDLF 68
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GPT+TAS+NGK+Y LVIVDDYTRWT
Sbjct: 69 GPTKTASINGKQYRLVIVDDYTRWT 93
>KYP48238.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 250
Score = 133 bits (335), Expect = 4e-37
Identities = 60/84 (71%), Positives = 75/84 (89%)
Frame = +3
Query: 6 RTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFG 185
R ISK+ +HNLV+GLPNLV+++ +CEACQK KQ+K+SF SKN VSTSRPLELLH+DLFG
Sbjct: 12 RLISKMKRHNLVKGLPNLVHQTNNVCEACQKRKQIKSSFQSKNHVSTSRPLELLHIDLFG 71
Query: 186 PTQTASLNGKKYGLVIVDDYTRWT 257
PT+T S++ K+YGL+IVDDYTRWT
Sbjct: 72 PTRTTSISDKRYGLIIVDDYTRWT 95
>KYP54694.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 319
Score = 134 bits (338), Expect = 7e-37
Identities = 66/85 (77%), Positives = 74/85 (87%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR I KL KHNLVRGLP+LVY++ LCEACQKGKQVK+SF SKN VSTSR LE LH+DLF
Sbjct: 9 LRLILKLKKHNLVRGLPSLVYQTNSLCEACQKGKQVKSSFKSKNYVSTSRRLEFLHIDLF 68
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GPT+TAS+NGK+Y LVIVDDYTR T
Sbjct: 69 GPTKTASINGKQYRLVIVDDYTRLT 93
>KYP42467.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 490
Score = 132 bits (331), Expect = 1e-34
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR ISKL KHNL+RGL +LV+++ LC+ACQKGKQ+K+SF SKN VSTSR ELLH+DLF
Sbjct: 363 LRLISKLKKHNLIRGLTSLVHQTNSLCDACQKGKQIKSSFQSKNHVSTSRAYELLHIDLF 422
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GPT+T S+ GK+YGLVIVDDYTRWT
Sbjct: 423 GPTRTTSVIGKQYGLVIVDDYTRWT 447
>KYP36277.1 Copia protein [Cajanus cajan]
Length = 208
Score = 123 bits (309), Expect = 1e-33
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
ISKL KHNLVRGLPNLV+++ +CEACQ GKQ+K+SF SKN VSTSRPLELLH+DLFGPT
Sbjct: 132 ISKLKKHNLVRGLPNLVHQTNNVCEACQNGKQIKSSFQSKNHVSTSRPLELLHIDLFGPT 191
Query: 192 QTASLNGKKYGLVIVDD 242
+T ++GK+YGLVIVDD
Sbjct: 192 RTIFVSGKRYGLVIVDD 208
>ABD32582.1 Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 128 bits (322), Expect = 1e-32
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 6 RTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFG 185
R ISK++K LV+GLPN+ Y S+ LC ACQKGK VK+SF SK+IVSTSRPLELLH+DLFG
Sbjct: 810 RLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG 869
Query: 186 PTQTASLNGKKYGLVIVDDYTRWT 257
P TASL G KYGLVIVDDY+RWT
Sbjct: 870 PVNTASLYGSKYGLVIVDDYSRWT 893
>ABE88110.1 Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Medicago truncatula]
Length = 1654
Score = 127 bits (318), Expect = 4e-32
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +3
Query: 6 RTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFG 185
R ISK+ K LV+GLPN+ Y S+ LC ACQKGK VK+SF SK+IVSTSRPLELLH+DLFG
Sbjct: 749 RLISKIIKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG 808
Query: 186 PTQTASLNGKKYGLVIVDDYTRWT 257
P TASL G KYGLVIVDDY+RWT
Sbjct: 809 PVNTASLYGSKYGLVIVDDYSRWT 832
>KYP49882.1 Copia protein, partial [Cajanus cajan]
Length = 385
Score = 122 bits (307), Expect = 1e-31
Identities = 60/78 (76%), Positives = 69/78 (88%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
LR I KL KHNLV+GL +LVY+S LCEACQKGK+VK+SF SKN VSTSRPLELLHMDLF
Sbjct: 306 LRLILKLKKHNLVKGLSSLVYQSNSLCEACQKGKEVKSSFESKNHVSTSRPLELLHMDLF 365
Query: 183 GPTQTASLNGKKYGLVIV 236
GPT+TA ++GK+YGLVIV
Sbjct: 366 GPTRTAFVSGKRYGLVIV 383
>XP_013455251.1 hypothetical protein MTR_4g033045 [Medicago truncatula] KEH29282.1
hypothetical protein MTR_4g033045 [Medicago truncatula]
Length = 187
Score = 116 bits (290), Expect = 5e-31
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +3
Query: 6 RTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFG 185
R ISKL K LV+GLP L Y S+ LC ACQKGK VK +F KNIVSTSRPLELLH+DLFG
Sbjct: 109 RLISKLIKQKLVKGLPELQYHSDALCRACQKGKSVKTTFKPKNIVSTSRPLELLHIDLFG 168
Query: 186 PTQTASLNGKKYGLVIVDD 242
P AS+NGK YGLV+VDD
Sbjct: 169 PVSIASINGKMYGLVVVDD 187
>KYP35168.1 hypothetical protein KK1_043810 [Cajanus cajan]
Length = 85
Score = 112 bits (280), Expect = 9e-31
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
++KL++ LV GLP L + + LC+ACQKGKQVK SF SKN +STSRPL+L+HMD FGP+
Sbjct: 4 LNKLSRKELVVGLPKLKFSKDKLCDACQKGKQVKASFKSKNHISTSRPLQLIHMDFFGPS 63
Query: 192 QTASLNGKKYGLVIVDDYTRWT 257
+T SL G YGLVIVDDY+R+T
Sbjct: 64 RTMSLGGNYYGLVIVDDYSRFT 85
>KYP74059.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 470
Score = 121 bits (303), Expect = 1e-30
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +3
Query: 6 RTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFG 185
R ISKL KHNL+RGLP+LV++S LCE QKG +K+SF +KN VSTSRPLELLH+DLFG
Sbjct: 139 RLISKLKKHNLIRGLPSLVFQSNSLCETYQKGNVIKSSFENKNHVSTSRPLELLHIDLFG 198
Query: 186 PTQTASLNGKKYGLVIVDDYTRWT 257
PT+TA ++GK+Y LVIVDDYT+ T
Sbjct: 199 PTRTAYVSGKRYELVIVDDYTKST 222
>KYP45449.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 141
Score = 112 bits (280), Expect = 4e-30
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
++KL++ LV GLP L + LC+ACQKGKQVK SF SKN +STSRPL+L+HMDLFGP+
Sbjct: 38 LNKLSRKELVIGLPKLKISKDKLCDACQKGKQVKASFKSKNQISTSRPLQLIHMDLFGPS 97
Query: 192 QTASLNGKKYGLVIVDDYTRWT 257
+T SL G YGLVIVDDY+R+T
Sbjct: 98 RTMSLGGNYYGLVIVDDYSRFT 119
>KYP78343.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 149
Score = 111 bits (278), Expect = 1e-29
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
++KL++ LV GLP L + + LC+ACQKGKQVK SF SKN +ST+RPL+L+H+DLFGP+
Sbjct: 46 LNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVKASFKSKNQISTTRPLQLIHLDLFGPS 105
Query: 192 QTASLNGKKYGLVIVDDYTRWT 257
+T SL G YGLVIVDDY+R+T
Sbjct: 106 RTMSLGGNYYGLVIVDDYSRFT 127
>CAN64335.1 hypothetical protein VITISV_001808 [Vitis vinifera]
Length = 1885
Score = 119 bits (299), Expect = 1e-29
Identities = 54/82 (65%), Positives = 68/82 (82%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
IS+LNK LVRGLP + ++ + +CEACQ GKQ+KNSF +KN +STSRPLELLHMDLFGP+
Sbjct: 616 ISQLNKDELVRGLPKINFQKDKICEACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPS 675
Query: 192 QTASLNGKKYGLVIVDDYTRWT 257
+T SL GK Y VIVDD++R+T
Sbjct: 676 RTPSLGGKSYAYVIVDDFSRYT 697
>CAN74951.1 hypothetical protein VITISV_030567, partial [Vitis vinifera]
Length = 2203
Score = 119 bits (299), Expect = 1e-29
Identities = 54/82 (65%), Positives = 68/82 (82%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
IS+LNK LVRGLP + ++ + +CEACQ GKQ+KNSF +KN +STSRPLELLHMDLFGP+
Sbjct: 1047 ISQLNKDELVRGLPKINFQKDKICEACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPS 1106
Query: 192 QTASLNGKKYGLVIVDDYTRWT 257
+T SL GK Y VIVDD++R+T
Sbjct: 1107 RTPSLGGKSYAYVIVDDFSRYT 1128
>EOY03245.1 Uncharacterized protein TCM_017953 [Theobroma cacao]
Length = 395
Score = 117 bits (292), Expect = 2e-29
Identities = 55/85 (64%), Positives = 68/85 (80%)
Frame = +3
Query: 3 LRTISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLF 182
+ T+SKL K NLV GLP L ++++ +C+ACQ GKQV+ SF SK IVSTSRPLELLH+DLF
Sbjct: 311 MHTMSKLIKKNLVAGLPELKFENDRICDACQLGKQVRISFKSKKIVSTSRPLELLHIDLF 370
Query: 183 GPTQTASLNGKKYGLVIVDDYTRWT 257
GP T SL GK YG VI+DDY+R+T
Sbjct: 371 GPISTTSLGGKSYGFVIIDDYSRYT 395
>CAN69203.1 hypothetical protein VITISV_023039 [Vitis vinifera]
Length = 543
Score = 118 bits (295), Expect = 3e-29
Identities = 54/82 (65%), Positives = 68/82 (82%)
Frame = +3
Query: 12 ISKLNKHNLVRGLPNLVYKSEVLCEACQKGKQVKNSFNSKNIVSTSRPLELLHMDLFGPT 191
IS+LNK LVRGLP + ++ + +CEACQ GKQ+KNSF +KN +STSRPLELLHMDLFGP+
Sbjct: 234 ISQLNKDELVRGLPKINFQKDKVCEACQVGKQIKNSFKNKNFISTSRPLELLHMDLFGPS 293
Query: 192 QTASLNGKKYGLVIVDDYTRWT 257
+T SL GK Y VIVDD++R+T
Sbjct: 294 RTPSLRGKSYTYVIVDDFSRYT 315