BLASTX nr result

ID: Glycyrrhiza28_contig00017978 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00017978
         (518 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU48346.1 hypothetical protein TSUD_267710 [Trifolium subterran...    62   3e-08
XP_012572879.1 PREDICTED: splicing factor U2af large subunit A-l...    61   7e-08
KHN47080.1 Splicing factor U2af large subunit B [Glycine soja]         59   5e-07

>GAU48346.1 hypothetical protein TSUD_267710 [Trifolium subterraneum]
          Length = 585

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = -3

Query: 114 MLGY*PHCADNGREPTSVAFISTEESMHLFLVRSLVQI 1
           MLGY PHCADNGREPTSVAF+S EESMH FLV  + QI
Sbjct: 206 MLGYLPHCADNGREPTSVAFMSKEESMHRFLVGLVRQI 243


>XP_012572879.1 PREDICTED: splicing factor U2af large subunit A-like isoform X5
           [Cicer arietinum]
          Length = 636

 Score = 61.2 bits (147), Expect = 7e-08
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 117 AMLGY*PHCADNGREPTSVAFISTEESMHLFLV 19
           AMLGY PHCADNGREPTSVAF+S EES+H FLV
Sbjct: 209 AMLGYLPHCADNGREPTSVAFMSKEESVHRFLV 241


>KHN47080.1 Splicing factor U2af large subunit B [Glycine soja]
          Length = 653

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 99  PHCADNGREPTSVAFISTEESMHLFLV 19
           PHCADNGREPTSVAF+STEESMHLFLV
Sbjct: 230 PHCADNGREPTSVAFMSTEESMHLFLV 256


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