BLASTX nr result
ID: Glycyrrhiza28_contig00017523
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00017523
(315 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcri... 199 3e-57
GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterran... 199 4e-57
KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja] 193 3e-55
XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcri... 193 3e-55
XP_013449281.1 mediator of RNA polymerase II transcription subun... 193 4e-55
XP_003623670.1 mediator of RNA polymerase II transcription subun... 193 4e-55
KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan] 186 2e-52
KOM37309.1 hypothetical protein LR48_Vigan03g069000 [Vigna angul... 176 3e-52
XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcri... 177 1e-49
XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcri... 176 3e-49
BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis ... 175 9e-49
XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcri... 170 5e-47
XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcri... 169 2e-46
XP_018818303.1 PREDICTED: mediator of RNA polymerase II transcri... 144 7e-38
XP_018818235.1 PREDICTED: mediator of RNA polymerase II transcri... 144 7e-38
XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcri... 144 7e-38
XP_018818097.1 PREDICTED: mediator of RNA polymerase II transcri... 144 7e-38
XP_018818023.1 PREDICTED: mediator of RNA polymerase II transcri... 144 7e-38
OMO51532.1 hypothetical protein CCACVL1_29737 [Corchorus capsula... 144 9e-38
OMO77508.1 hypothetical protein COLO4_25124 [Corchorus olitorius] 143 2e-37
>XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cicer arietinum]
Length = 1318
Score = 199 bits (506), Expect = 3e-57
Identities = 98/104 (94%), Positives = 101/104 (97%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
T LPSSK SRRNR+IGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGL+VSLAP WVQE
Sbjct: 1206 TNLPSSKLSRRNRIIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLIVSLAPTWVQE 1265
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
VKV+TLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI
Sbjct: 1266 VKVETLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 1309
>GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterraneum]
Length = 1247
Score = 199 bits (505), Expect = 4e-57
Identities = 97/104 (93%), Positives = 102/104 (98%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLPSSK SRRNR+IGVHLDFLAEVMERKISLSCNP+TWKTYVCCLVGLMVS APAW+Q+
Sbjct: 1135 TKLPSSKLSRRNRIIGVHLDFLAEVMERKISLSCNPLTWKTYVCCLVGLMVSFAPAWLQD 1194
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
VKVDTLRKLARGLSRWNE+ELALSLLQRGGTAAMGALAELVNVI
Sbjct: 1195 VKVDTLRKLARGLSRWNEYELALSLLQRGGTAAMGALAELVNVI 1238
>KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja]
Length = 1332
Score = 193 bits (491), Expect = 3e-55
Identities = 96/104 (92%), Positives = 98/104 (94%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLPS F+RR R I VHLDFLAEVME+KISLSCNPITWKTYVCCLVGLMVSLAPAWVQE
Sbjct: 1220 TKLPSGTFNRRKRTIEVHLDFLAEVMEKKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 1279
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
VKVDTLRKLARGLSRWNEHELALSLL RGGTAAMGALAELVNVI
Sbjct: 1280 VKVDTLRKLARGLSRWNEHELALSLLHRGGTAAMGALAELVNVI 1323
>XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Glycine max] KRH00532.1 hypothetical protein
GLYMA_18G218900 [Glycine max]
Length = 1332
Score = 193 bits (491), Expect = 3e-55
Identities = 96/104 (92%), Positives = 98/104 (94%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLPS F+RR R I VHLDFLAEVME+KISLSCNPITWKTYVCCLVGLMVSLAPAWVQE
Sbjct: 1220 TKLPSGTFNRRKRTIEVHLDFLAEVMEKKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 1279
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
VKVDTLRKLARGLSRWNEHELALSLL RGGTAAMGALAELVNVI
Sbjct: 1280 VKVDTLRKLARGLSRWNEHELALSLLHRGGTAAMGALAELVNVI 1323
>XP_013449281.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] KEH23308.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 992
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 98/104 (94%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLPS K SRRN IGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVS APAW+QE
Sbjct: 880 TKLPSPKLSRRNHTIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSFAPAWLQE 939
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
+KVD+LRKLA GLSRWNEHELALSLLQRGGTAAMGALAEL+NVI
Sbjct: 940 MKVDSLRKLAHGLSRWNEHELALSLLQRGGTAAMGALAELINVI 983
>XP_003623670.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] AES79888.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 1320
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 98/104 (94%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLPS K SRRN IGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVS APAW+QE
Sbjct: 1208 TKLPSPKLSRRNHTIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSFAPAWLQE 1267
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
+KVD+LRKLA GLSRWNEHELALSLLQRGGTAAMGALAEL+NVI
Sbjct: 1268 MKVDSLRKLAHGLSRWNEHELALSLLQRGGTAAMGALAELINVI 1311
>KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan]
Length = 1233
Score = 186 bits (471), Expect = 2e-52
Identities = 93/104 (89%), Positives = 95/104 (91%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLP FSRRNR I VHL+FLAEVME+KISLSCNPITWKTYVCCLVGLMV LAPAWVQE
Sbjct: 1121 TKLPPGTFSRRNRTIEVHLEFLAEVMEKKISLSCNPITWKTYVCCLVGLMVRLAPAWVQE 1180
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
VKVDTLRKLARGLSRWNE ELALSLL RGGTAAMGALAE VNVI
Sbjct: 1181 VKVDTLRKLARGLSRWNEVELALSLLHRGGTAAMGALAEFVNVI 1224
>KOM37309.1 hypothetical protein LR48_Vigan03g069000 [Vigna angularis]
Length = 372
Score = 176 bits (447), Expect = 3e-52
Identities = 85/104 (81%), Positives = 92/104 (88%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLP FSRR+R I VHLDFLAEVME+KIS+SCNPITWKTYVCC VG MVSLAP W+QE
Sbjct: 255 TKLPPGTFSRRSRTIEVHLDFLAEVMEKKISVSCNPITWKTYVCCFVGFMVSLAPVWIQE 314
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
V+VDTL+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV VI
Sbjct: 315 VRVDTLKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVI 358
>XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Vigna radiata var. radiata]
Length = 1326
Score = 177 bits (449), Expect = 1e-49
Identities = 85/104 (81%), Positives = 92/104 (88%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLP FSRR+R I VHLDFLAEVME+KISLSCNPITWKTYVCC VG MVSLAP W+QE
Sbjct: 1214 TKLPPGTFSRRSRTIEVHLDFLAEVMEKKISLSCNPITWKTYVCCFVGFMVSLAPVWIQE 1273
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
V+VDTL+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV V+
Sbjct: 1274 VRVDTLKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVV 1317
>XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Vigna angularis]
Length = 1331
Score = 176 bits (447), Expect = 3e-49
Identities = 85/104 (81%), Positives = 92/104 (88%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLP FSRR+R I VHLDFLAEVME+KIS+SCNPITWKTYVCC VG MVSLAP W+QE
Sbjct: 1214 TKLPPGTFSRRSRTIEVHLDFLAEVMEKKISVSCNPITWKTYVCCFVGFMVSLAPVWIQE 1273
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
V+VDTL+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV VI
Sbjct: 1274 VRVDTLKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVI 1317
>BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis var. angularis]
Length = 1331
Score = 175 bits (443), Expect = 9e-49
Identities = 84/104 (80%), Positives = 92/104 (88%)
Frame = +1
Query: 4 TKLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQE 183
TKLP FSRR+R I VHLDFLAEVME+KIS+SCNPITWKTYVCC VG +VSLAP W+QE
Sbjct: 1214 TKLPPGTFSRRSRTIEVHLDFLAEVMEKKISVSCNPITWKTYVCCFVGFIVSLAPVWIQE 1273
Query: 184 VKVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
V+VDTL+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV VI
Sbjct: 1274 VRVDTLKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVI 1317
>XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis duranensis]
Length = 1324
Score = 170 bits (431), Expect = 5e-47
Identities = 81/103 (78%), Positives = 93/103 (90%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KLPS FSRRNR +GVHLDFLAEVMERKISLSC+P+TWKTYV LVG M++ APAW++EV
Sbjct: 1211 KLPSWTFSRRNRTVGVHLDFLAEVMERKISLSCHPVTWKTYVSSLVGFMITYAPAWIREV 1270
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
KV+TLRKLA GL RW++HELALSLLQRGG AAMGALAELVN++
Sbjct: 1271 KVETLRKLAHGLCRWHKHELALSLLQRGGVAAMGALAELVNLV 1313
>XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis ipaensis]
Length = 1326
Score = 169 bits (427), Expect = 2e-46
Identities = 80/103 (77%), Positives = 92/103 (89%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KLPS FSRRNR +G HLDFLAEVMERKISLSC+P+TWKTYV LVG M++ APAW++EV
Sbjct: 1213 KLPSWTFSRRNRTVGAHLDFLAEVMERKISLSCHPVTWKTYVSSLVGFMITYAPAWIREV 1272
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
KV+TLRKLA GL RW++HELALSLLQRGG AAMGALAELVN++
Sbjct: 1273 KVETLRKLAHGLCRWHKHELALSLLQRGGVAAMGALAELVNLV 1315
>XP_018818303.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X5 [Juglans regia]
Length = 1085
Score = 144 bits (363), Expect = 7e-38
Identities = 69/103 (66%), Positives = 85/103 (82%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KL + FSRR R +GVH+DFLA V+E ISL C+P TWK Y+ CLVGLMV APAW+QEV
Sbjct: 982 KLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEV 1041
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1042 KLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1084
>XP_018818235.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X4 [Juglans regia]
Length = 1089
Score = 144 bits (363), Expect = 7e-38
Identities = 69/103 (66%), Positives = 85/103 (82%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KL + FSRR R +GVH+DFLA V+E ISL C+P TWK Y+ CLVGLMV APAW+QEV
Sbjct: 986 KLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEV 1045
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1046 KLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1088
>XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Juglans regia]
Length = 1274
Score = 144 bits (363), Expect = 7e-38
Identities = 69/103 (66%), Positives = 85/103 (82%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KL + FSRR R +GVH+DFLA V+E ISL C+P TWK Y+ CLVGLMV APAW+QEV
Sbjct: 1171 KLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEV 1230
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1231 KLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1273
>XP_018818097.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Juglans regia]
Length = 1308
Score = 144 bits (363), Expect = 7e-38
Identities = 69/103 (66%), Positives = 85/103 (82%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KL + FSRR R +GVH+DFLA V+E ISL C+P TWK Y+ CLVGLMV APAW+QEV
Sbjct: 1205 KLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEV 1264
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1265 KLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1307
>XP_018818023.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Juglans regia]
Length = 1328
Score = 144 bits (363), Expect = 7e-38
Identities = 69/103 (66%), Positives = 85/103 (82%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
KL + FSRR R +GVH+DFLA V+E ISL C+P TWK Y+ CLVGLMV APAW+QEV
Sbjct: 1225 KLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEV 1284
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1285 KLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1327
>OMO51532.1 hypothetical protein CCACVL1_29737 [Corchorus capsularis]
Length = 1303
Score = 144 bits (362), Expect = 9e-38
Identities = 68/103 (66%), Positives = 85/103 (82%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
K PSS S+R ++GVH+DFLA V+E +ISL CNP TW+ YV CLVGL+VS APAW+Q+V
Sbjct: 1200 KTPSSATSKRACMVGVHMDFLARVLEGQISLGCNPATWRAYVSCLVGLIVSCAPAWIQQV 1259
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E+ELALSLL+RGG A G++AELVNVI
Sbjct: 1260 KLETLRKLASGLRGWDEYELALSLLERGGVPAFGSVAELVNVI 1302
>OMO77508.1 hypothetical protein COLO4_25124 [Corchorus olitorius]
Length = 1281
Score = 143 bits (360), Expect = 2e-37
Identities = 68/103 (66%), Positives = 84/103 (81%)
Frame = +1
Query: 7 KLPSSKFSRRNRVIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSLAPAWVQEV 186
K PSS S+R ++GVH+DFLA V+E +ISL CNP TW+ YV CLVGL VS APAW+Q+V
Sbjct: 1178 KTPSSATSKRACMVGVHMDFLARVLEGQISLGCNPATWRAYVSCLVGLTVSCAPAWIQQV 1237
Query: 187 KVDTLRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 315
K++TLRKLA GL W+E+ELALSLL+RGG A G++AELVNVI
Sbjct: 1238 KLETLRKLASGLRGWDEYELALSLLERGGVPAFGSVAELVNVI 1280