BLASTX nr result

ID: Glycyrrhiza28_contig00017467 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00017467
         (260 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFG78214.1 defect in organelle trafficking protein DotC [Methylo...    82   2e-16
WP_012778858.1 hypothetical protein [Methylobacterium extorquens...    82   2e-16
WP_048426293.1 hypothetical protein [Methylobacterium platani] K...    68   2e-11
WP_048462624.1 hypothetical protein [Methylobacterium aquaticum]...    67   3e-11
WP_048432316.1 hypothetical protein [Methylobacterium platani] K...    67   3e-11
SEP49168.1 defect in organelle trafficking protein DotC [Methylo...    65   2e-10
WP_012606229.1 hypothetical protein [Methylobacterium extorquens...    64   4e-10
WP_048428647.1 hypothetical protein [Methylobacterium platani] K...    62   2e-09
WP_048442884.1 hypothetical protein [Methylobacterium variabile]...    59   3e-08

>SFG78214.1 defect in organelle trafficking protein DotC [Methylobacterium
           gossipiicola]
          Length = 389

 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +3

Query: 147 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP
Sbjct: 115 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 152


>WP_012778858.1 hypothetical protein [Methylobacterium extorquens] CAX17124.1
           hypothetical protein; putative exported protein
           (plasmid) [Methylobacterium extorquens DM4]
          Length = 399

 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +3

Query: 147 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP
Sbjct: 125 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 162


>WP_048426293.1 hypothetical protein [Methylobacterium platani] KMO23417.1
           hypothetical protein QR78_04445 [Methylobacterium
           platani] KMO26556.1 hypothetical protein QR79_02000
           [Methylobacterium platani]
          Length = 407

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 31/37 (83%), Positives = 31/37 (83%)
 Frame = +3

Query: 150 AQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           AQANVLN IANGPRSLPG D QPF PNVGDN  PPAP
Sbjct: 131 AQANVLNQIANGPRSLPGGDSQPFPPNVGDNQPPPAP 167


>WP_048462624.1 hypothetical protein [Methylobacterium aquaticum] KMO39384.1
           hypothetical protein VP06_04475 [Methylobacterium
           aquaticum]
          Length = 393

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +3

Query: 147 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           +AQANVLN IANGPR LPG D QPF PNVGDNSA PAP
Sbjct: 119 VAQANVLNQIANGPRGLPGGDSQPFPPNVGDNSAAPAP 156


>WP_048432316.1 hypothetical protein [Methylobacterium platani] KMO21336.1
           hypothetical protein SQ03_03570 [Methylobacterium
           platani JCM 14648] OAS25084.1 hypothetical protein
           A5481_11355 [Methylobacterium platani]
          Length = 393

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +3

Query: 147 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           +AQANVLN IANGPR LPG D QPF PNVGDNSA PAP
Sbjct: 119 VAQANVLNQIANGPRGLPGGDSQPFPPNVGDNSAAPAP 156


>SEP49168.1 defect in organelle trafficking protein DotC [Methylobacterium sp.
           ap11]
          Length = 402

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +3

Query: 150 AQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           AQAN LNAIANGPRSLPGQ+GQPF PNV D++  PAP
Sbjct: 127 AQANALNAIANGPRSLPGQEGQPFPPNVADSAPAPAP 163


>WP_012606229.1 hypothetical protein [Methylobacterium extorquens] ACK86334.1
           hypothetical protein Mchl_5602 (plasmid)
           [Methylobacterium extorquens CM4]
          Length = 384

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = +3

Query: 147 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           +AQAN LNAIANGPRSLPGQDGQPF  NV D S  PAP
Sbjct: 110 IAQANALNAIANGPRSLPGQDGQPFPQNVPDQSPAPAP 147


>WP_048428647.1 hypothetical protein [Methylobacterium platani] KMO17838.1
           hypothetical protein QR78_16575 [Methylobacterium
           platani]
          Length = 373

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 150 AQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           AQAN LNAIANGPRSLP Q+GQPF PNV D++  PAP
Sbjct: 98  AQANALNAIANGPRSLPDQEGQPFPPNVADSAPAPAP 134


>WP_048442884.1 hypothetical protein [Methylobacterium variabile] KMO42104.1
           hypothetical protein VQ02_04100 [Methylobacterium
           variabile]
          Length = 378

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = +3

Query: 147 LAQANVLNAIANGPRSLPGQDGQPFAPNVGDNSAPPAP 260
           +AQAN L+AIANGPR LPG D QPF  NVGDN   PAP
Sbjct: 103 IAQANALSAIANGPRYLPGGDSQPFPSNVGDNQPAPAP 140


Top