BLASTX nr result

ID: Glycyrrhiza28_contig00016319 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00016319
         (284 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABD63139.1 Reverse transcriptase family protein [Asparagus offic...    48   1e-07
ABD63165.1 F5M15.26, related [Asparagus officinalis]                   48   1e-07
ONK72915.1 uncharacterized protein A4U43_C04F24880 [Asparagus of...    47   2e-06
ONK72755.1 uncharacterized protein A4U43_C04F22830 [Asparagus of...    45   2e-06
ONK57059.1 uncharacterized protein A4U43_C10F16190 [Asparagus of...    41   6e-06

>ABD63139.1 Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 47.8 bits (112), Expect(3) = 1e-07
 Identities = 23/49 (46%), Positives = 30/49 (61%)
 Frame = +3

Query: 138 VPTSRLSQTKVTIPGYNADSQRAARFVSCVCQTWDLKTEVTSYVIDGDT 284
           +P  RL  T+ TI G+NA+S R    +   CQ  DLK+EV  Y+ID DT
Sbjct: 216 IPMHRLHTTQTTIFGFNANSTRPLGKIKLRCQIGDLKSEVACYIIDADT 264



 Score = 31.6 bits (70), Expect(3) = 1e-07
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = +2

Query: 62  LPRVEIDPGASINVMPLRALADLGI 136
           + RV++DPG+++++MP R +  LGI
Sbjct: 192 ISRVQVDPGSALSIMPYRVMQVLGI 216



 Score = 22.7 bits (47), Expect(3) = 1e-07
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 13  HKRPLYLTGDIG 48
           H RPLY TG IG
Sbjct: 177 HDRPLYYTGYIG 188


>ABD63165.1 F5M15.26, related [Asparagus officinalis]
          Length = 320

 Score = 47.8 bits (112), Expect(3) = 1e-07
 Identities = 23/49 (46%), Positives = 30/49 (61%)
 Frame = +3

Query: 138 VPTSRLSQTKVTIPGYNADSQRAARFVSCVCQTWDLKTEVTSYVIDGDT 284
           +P  RL  T+ TI G+NA+S R    +   CQ  DLK+EV  Y+ID DT
Sbjct: 46  IPMHRLHTTQTTIFGFNANSTRPLGKIKLRCQIGDLKSEVACYIIDADT 94



 Score = 31.6 bits (70), Expect(3) = 1e-07
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = +2

Query: 62  LPRVEIDPGASINVMPLRALADLGI 136
           + RV++DPG+++++MP R +  LGI
Sbjct: 22  ISRVQVDPGSALSIMPYRVMQVLGI 46



 Score = 22.7 bits (47), Expect(3) = 1e-07
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 13 HKRPLYLTGDIG 48
          H RPLY TG IG
Sbjct: 7  HDRPLYYTGYIG 18


>ONK72915.1 uncharacterized protein A4U43_C04F24880 [Asparagus officinalis]
          Length = 1510

 Score = 46.6 bits (109), Expect(3) = 2e-06
 Identities = 22/49 (44%), Positives = 28/49 (57%)
 Frame = +3

Query: 138  VPTSRLSQTKVTIPGYNADSQRAARFVSCVCQTWDLKTEVTSYVIDGDT 284
            +P S+L+ T   I G+N    R    +   CQ  DLKTEVT YVID +T
Sbjct: 910  IPVSKLASTGTVIYGFNTSGSRPLGKIRVKCQMGDLKTEVTCYVIDAET 958



 Score = 30.0 bits (66), Expect(3) = 2e-06
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +2

Query: 68  RVEIDPGASINVMPLRALADLGI 136
           R+++DPG+++++MPLR +  L I
Sbjct: 888 RIQVDPGSAVSIMPLRLMHFLSI 910



 Score = 21.6 bits (44), Expect(3) = 2e-06
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 7   SIHKRPLYLTGDIG 48
           S H RPLY  G IG
Sbjct: 869 SNHDRPLYFVGYIG 882


>ONK72755.1 uncharacterized protein A4U43_C04F22830 [Asparagus officinalis]
          Length = 378

 Score = 45.4 bits (106), Expect(3) = 2e-06
 Identities = 22/49 (44%), Positives = 30/49 (61%)
 Frame = +3

Query: 138 VPTSRLSQTKVTIPGYNADSQRAARFVSCVCQTWDLKTEVTSYVIDGDT 284
           +P  RL  T+ TI  +NA+S R    +   CQ  DL++EVT Y+ID DT
Sbjct: 245 IPMHRLHATQTTIFRFNANSTRPLGKIKLRCQIGDLRSEVTCYIIDADT 293



 Score = 32.0 bits (71), Expect(3) = 2e-06
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 50  KERRLPRVEIDPGASINVMPLRALADLGI 136
           +   + RV++DPG+++++MP R +  LGI
Sbjct: 217 RSSEISRVQVDPGSALSIMPYRVMQVLGI 245



 Score = 20.4 bits (41), Expect(3) = 2e-06
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 13  HKRPLYLTGDI 45
           H RPLY TG I
Sbjct: 206 HDRPLYYTGYI 216


>ONK57059.1 uncharacterized protein A4U43_C10F16190 [Asparagus officinalis]
          Length = 230

 Score = 40.8 bits (94), Expect(3) = 6e-06
 Identities = 20/48 (41%), Positives = 27/48 (56%)
 Frame = +3

Query: 138 VPTSRLSQTKVTIPGYNADSQRAARFVSCVCQTWDLKTEVTSYVIDGD 281
           +P   LS T  TI G+NA   R    +   C+  D+KT+VT YVID +
Sbjct: 106 IPPKSLSLTATTIFGFNATGTRPRGKIRLKCRIGDMKTKVTCYVIDAE 153



 Score = 31.2 bits (69), Expect(3) = 6e-06
 Identities = 9/26 (34%), Positives = 22/26 (84%)
 Frame = +2

Query: 59  RLPRVEIDPGASINVMPLRALADLGI 136
           ++ R+++DPG++++++PL+ +  LGI
Sbjct: 81  KVDRIQVDPGSALSIVPLKLIKHLGI 106



 Score = 24.3 bits (51), Expect(3) = 6e-06
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 13  HKRPLYLTGDIGERK 57
           H RPLY TG +G  K
Sbjct: 67  HDRPLYFTGYVGSSK 81


Top