BLASTX nr result
ID: Glycyrrhiza28_contig00016241
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00016241
(1603 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013466604.1 RNA-directed RNA polymerase [Medicago truncatula]... 518 e-173
XP_013466603.1 RNA-directed RNA polymerase [Medicago truncatula]... 518 e-169
GAU20393.1 hypothetical protein TSUD_12110 [Trifolium subterraneum] 517 e-169
XP_004498237.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 502 e-163
XP_004498236.1 PREDICTED: probable RNA-dependent RNA polymerase ... 502 e-163
XP_003518619.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycin... 501 e-163
XP_016175443.1 PREDICTED: RNA-dependent RNA polymerase 1-like [A... 496 e-161
XP_015940506.1 PREDICTED: RNA-dependent RNA polymerase 1-like [A... 496 e-161
XP_013466600.1 RNA-directed RNA polymerase [Medicago truncatula]... 496 e-161
XP_013466608.1 RNA-directed RNA polymerase [Medicago truncatula]... 491 e-154
XP_019461464.1 PREDICTED: RNA-dependent RNA polymerase 1 [Lupinu... 475 e-153
KYP49993.1 putative RNA-dependent RNA polymerase 1 [Cajanus cajan] 471 e-151
XP_015937207.1 PREDICTED: probable RNA-dependent RNA polymerase ... 444 e-141
XP_016170571.1 PREDICTED: probable RNA-dependent RNA polymerase ... 443 e-141
XP_012072325.1 PREDICTED: RNA-dependent RNA polymerase 1-like [J... 439 e-139
XP_010236147.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe... 299 e-137
XP_012072320.1 PREDICTED: RNA-dependent RNA polymerase 1-like is... 428 e-135
XP_012072321.1 PREDICTED: RNA-dependent RNA polymerase 1-like is... 427 e-134
XP_018856654.1 PREDICTED: RNA-dependent RNA polymerase 1 [Juglan... 426 e-134
KQK02024.1 hypothetical protein BRADI_3g59910 [Brachypodium dist... 286 e-133
>XP_013466604.1 RNA-directed RNA polymerase [Medicago truncatula] KEH40644.1
RNA-directed RNA polymerase [Medicago truncatula]
Length = 789
Score = 518 bits (1334), Expect = e-173
Identities = 249/348 (71%), Positives = 296/348 (85%), Gaps = 1/348 (0%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+YGFPS V VS VK F+E YTGE +V A+KIR G GRV RAFAIIQFT+AKHAT M
Sbjct: 5 KTIELYGFPSFVNVSQVKIFVEHYTGEGSVVAMKIRVGNGRVKRAFAIIQFTTAKHATFM 64
Query: 201 LSLADKS-LWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKVN 377
++L ++ L + +SYLKVRE+ERDI P+PR FLDSL++VKLYFGCQISK R S LWK
Sbjct: 65 MALPSRTKLRFGDSYLKVRELERDIDPKPRAFLDSLDDVKLYFGCQISKERFSKLWKV-- 122
Query: 378 DVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRIF 557
D SVDFGIGMRKWRF + H + K+KLELSYENIWKIEL+QPQG+T KYLLIQL GAPR+F
Sbjct: 123 DASVDFGIGMRKWRFSMHHENKKFKLELSYENIWKIELHQPQGKTAKYLLIQLIGAPRVF 182
Query: 558 KMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFRE 737
+ +PTS ++Y+DPL NY++D+PD+QWIRAIDFTPC+CIGQSSA+CLEL ++DFPNF+E
Sbjct: 183 ECNVPTSTSVYKDPLKNYYRDSPDDQWIRAIDFTPCNCIGQSSAICLELSSNRDFPNFKE 242
Query: 738 NFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSGL 917
N +YEE E QY LESG +FS NPD+VP+VAPPQGI+IPFDILFKVNSLVQHG LSGS L
Sbjct: 243 NCVHYEEIEGQYTLESGSSFSCNPDVVPMVAPPQGIQIPFDILFKVNSLVQHGCLSGSEL 302
Query: 918 DNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
DN+FY +VDP +N+E I+HALEKMYYSKDFCYEP RWL GQY+RYL+
Sbjct: 303 DNDFYRLVDPLGINVELIKHALEKMYYSKDFCYEPARWLKGQYRRYLR 350
Score = 291 bits (745), Expect = 6e-86
Identities = 147/180 (81%), Positives = 157/180 (87%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL QY+RYL +NNPPRSP ISLD GLVYVRRVQITPCKVYF GPEINVSNRVLRH
Sbjct: 336 EPARWLKGQYRRYLRANNPPRSPTISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVLRH 395
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F++HI+NFLRVSFVDEELD +YS DLSSR S+ +TEIY R+LSILRNGI IG KFEFL
Sbjct: 396 FHQHIDNFLRVSFVDEELDNMYSADLSSRISENGRTEIYYRILSILRNGIDIGGMKFEFL 455
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMFA TTTG TA IREWMGDF I+NVAKYAARLGQSFGSSTETLSV
Sbjct: 456 AFSSSQLRENSLWMFARTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSV 515
>XP_013466603.1 RNA-directed RNA polymerase [Medicago truncatula] KEH40645.1
RNA-directed RNA polymerase [Medicago truncatula]
Length = 1114
Score = 518 bits (1334), Expect = e-169
Identities = 249/348 (71%), Positives = 296/348 (85%), Gaps = 1/348 (0%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+YGFPS V VS VK F+E YTGE +V A+KIR G GRV RAFAIIQFT+AKHAT M
Sbjct: 5 KTIELYGFPSFVNVSQVKIFVEHYTGEGSVVAMKIRVGNGRVKRAFAIIQFTTAKHATFM 64
Query: 201 LSLADKS-LWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKVN 377
++L ++ L + +SYLKVRE+ERDI P+PR FLDSL++VKLYFGCQISK R S LWK
Sbjct: 65 MALPSRTKLRFGDSYLKVRELERDIDPKPRAFLDSLDDVKLYFGCQISKERFSKLWKV-- 122
Query: 378 DVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRIF 557
D SVDFGIGMRKWRF + H + K+KLELSYENIWKIEL+QPQG+T KYLLIQL GAPR+F
Sbjct: 123 DASVDFGIGMRKWRFSMHHENKKFKLELSYENIWKIELHQPQGKTAKYLLIQLIGAPRVF 182
Query: 558 KMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFRE 737
+ +PTS ++Y+DPL NY++D+PD+QWIRAIDFTPC+CIGQSSA+CLEL ++DFPNF+E
Sbjct: 183 ECNVPTSTSVYKDPLKNYYRDSPDDQWIRAIDFTPCNCIGQSSAICLELSSNRDFPNFKE 242
Query: 738 NFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSGL 917
N +YEE E QY LESG +FS NPD+VP+VAPPQGI+IPFDILFKVNSLVQHG LSGS L
Sbjct: 243 NCVHYEEIEGQYTLESGSSFSCNPDVVPMVAPPQGIQIPFDILFKVNSLVQHGCLSGSEL 302
Query: 918 DNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
DN+FY +VDP +N+E I+HALEKMYYSKDFCYEP RWL GQY+RYL+
Sbjct: 303 DNDFYRLVDPLGINVELIKHALEKMYYSKDFCYEPARWLKGQYRRYLR 350
Score = 291 bits (745), Expect = 8e-84
Identities = 147/180 (81%), Positives = 157/180 (87%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL QY+RYL +NNPPRSP ISLD GLVYVRRVQITPCKVYF GPEINVSNRVLRH
Sbjct: 336 EPARWLKGQYRRYLRANNPPRSPTISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVLRH 395
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F++HI+NFLRVSFVDEELD +YS DLSSR S+ +TEIY R+LSILRNGI IG KFEFL
Sbjct: 396 FHQHIDNFLRVSFVDEELDNMYSADLSSRISENGRTEIYYRILSILRNGIDIGGMKFEFL 455
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMFA TTTG TA IREWMGDF I+NVAKYAARLGQSFGSSTETLSV
Sbjct: 456 AFSSSQLRENSLWMFARTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSV 515
>GAU20393.1 hypothetical protein TSUD_12110 [Trifolium subterraneum]
Length = 1121
Score = 517 bits (1331), Expect = e-169
Identities = 249/353 (70%), Positives = 297/353 (84%), Gaps = 7/353 (1%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+YGFPS+V VS VKRF+E+ TGE +V A+KIR GKGR+PRAFAIIQFT+A+HAT M
Sbjct: 5 KTIELYGFPSSVNVSDVKRFVEKLTGEGSVVAMKIRVGKGRIPRAFAIIQFTTARHATFM 64
Query: 201 LSLADKS---LWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
++L +S L Y +SYLKVRE+ERDI P PR FLDSL++VKLYFGC ISK R SVLW K
Sbjct: 65 IALPIRSASTLRYGSSYLKVREMERDIDPNPRVFLDSLDDVKLYFGCLISKERFSVLWSK 124
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
DV VDFGIGM+KWRF L H D K+KLELSYENIWKIEL+QPQG+T KYLLIQL GAPR
Sbjct: 125 A-DVCVDFGIGMKKWRFSLHHDDKKFKLELSYENIWKIELHQPQGKTAKYLLIQLLGAPR 183
Query: 552 IFKMVIPTSA----NIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 719
++++ +P S +IY DPL+NY KD+PD+QWIRAIDFTPCSCIGQSSA+C+ELP ++D
Sbjct: 184 VYELYVPNSDVGVYSIYNDPLMNYNKDSPDDQWIRAIDFTPCSCIGQSSAICVELPSNRD 243
Query: 720 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGY 899
FPNFR N A+YEESE Q+ L+SG FS NPD+VP+VAPP+G +IPFDI FKVNSLVQHG
Sbjct: 244 FPNFRANCAHYEESEGQFTLQSGLAFSSNPDVVPMVAPPRGFQIPFDISFKVNSLVQHGC 303
Query: 900 LSGSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
+SGS LDN+FY +VDP ++N++FIEHALEKMYYSKDFCYEP RWL QY+RYL
Sbjct: 304 VSGSELDNDFYRLVDPHRINVDFIEHALEKMYYSKDFCYEPARWLKDQYRRYL 356
Score = 284 bits (727), Expect = 3e-81
Identities = 144/180 (80%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL DQY+RYL +N PPRSP ISLD GLVY+RR QITPCKVYF GPEINVSNRVLRH
Sbjct: 343 EPARWLKDQYRRYLGANTPPRSPTISLDNGLVYIRRAQITPCKVYFCGPEINVSNRVLRH 402
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F+EHI+NFLRVSFVDEELD LYS DLS+R S+ KT IY R+LSIL NG+ I KKFEFL
Sbjct: 403 FHEHIDNFLRVSFVDEELDNLYSADLSTRISERGKTGIYYRILSILMNGLDIAGKKFEFL 462
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMFA TTTG TA IR WMGDF IRNVAKYAARLGQSFGSSTETLSV
Sbjct: 463 AFSSSQLRENSLWMFARTTTGLTADSIRAWMGDFSRIRNVAKYAARLGQSFGSSTETLSV 522
>XP_004498237.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Cicer
arietinum]
Length = 1100
Score = 502 bits (1292), Expect = e-163
Identities = 244/351 (69%), Positives = 290/351 (82%), Gaps = 5/351 (1%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+YGFP++V V VKRF+E++TGE +V AIKIR+GK RV RA+AIIQF +A ATHM
Sbjct: 5 KTIELYGFPTSVVVPDVKRFVERFTGEGSVVAIKIREGKARVQRAYAIIQFNTANQATHM 64
Query: 201 LSLADKS---LWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
LSL ++S L Y NSYLK+RE+ RDIVP PRT+L+SL++V LYFGCQISK R S+LW+K
Sbjct: 65 LSLHNRSSTMLRYGNSYLKIREMVRDIVPNPRTYLESLDDVTLYFGCQISKERFSILWRK 124
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
DVSVD GMRKWRF + H + K+K +LSYENIWKIE YQP G+T KYLLIQL GAPR
Sbjct: 125 -RDVSVDLSAGMRKWRFCMCHDNKKFKFDLSYENIWKIEQYQPWGKTAKYLLIQLIGAPR 183
Query: 552 IFKMVIPTSA--NIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFP 725
IF++ +PTS N+YEDPL NYFK++PD+QWIRA+DFTP +CIGQSSA+CLELP D+DFP
Sbjct: 184 IFELYVPTSTSTNVYEDPLKNYFKESPDDQWIRAVDFTPFNCIGQSSAICLELPCDRDFP 243
Query: 726 NFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLS 905
N RE F +Y+E+E QY LESG FS N D+VPIVAPPQGI IPFDILFKVNSLVQHG LS
Sbjct: 244 NIREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHGCLS 303
Query: 906 GSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
GS LDN FY +VDP ++N++FIEHALEKMYYSKDFCYEP RWL QY+ YL
Sbjct: 304 GSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPARWLKDQYRMYL 354
Score = 300 bits (769), Expect = 3e-87
Identities = 151/180 (83%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL DQY+ YL+SN P +SP ISLD GLVYVRRVQITPCKVYF GPEINVSNRV+RH
Sbjct: 341 EPARWLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRH 400
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F+EHI+NFLRVSFVDEELDKLYSTDLSSR S G +TE+YNR+LSILRNGI+IGDKKFEFL
Sbjct: 401 FHEHIDNFLRVSFVDEELDKLYSTDLSSRISVGVRTEVYNRILSILRNGIVIGDKKFEFL 460
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMFAPT TG TA IR WMGDF IRNVAKYAARLGQSFGSSTETLSV
Sbjct: 461 AFSSSQLRENSLWMFAPTATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSV 520
>XP_004498236.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Cicer
arietinum]
Length = 1126
Score = 502 bits (1292), Expect = e-163
Identities = 244/351 (69%), Positives = 290/351 (82%), Gaps = 5/351 (1%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+YGFP++V V VKRF+E++TGE +V AIKIR+GK RV RA+AIIQF +A ATHM
Sbjct: 5 KTIELYGFPTSVVVPDVKRFVERFTGEGSVVAIKIREGKARVQRAYAIIQFNTANQATHM 64
Query: 201 LSLADKS---LWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
LSL ++S L Y NSYLK+RE+ RDIVP PRT+L+SL++V LYFGCQISK R S+LW+K
Sbjct: 65 LSLHNRSSTMLRYGNSYLKIREMVRDIVPNPRTYLESLDDVTLYFGCQISKERFSILWRK 124
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
DVSVD GMRKWRF + H + K+K +LSYENIWKIE YQP G+T KYLLIQL GAPR
Sbjct: 125 -RDVSVDLSAGMRKWRFCMCHDNKKFKFDLSYENIWKIEQYQPWGKTAKYLLIQLIGAPR 183
Query: 552 IFKMVIPTSA--NIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFP 725
IF++ +PTS N+YEDPL NYFK++PD+QWIRA+DFTP +CIGQSSA+CLELP D+DFP
Sbjct: 184 IFELYVPTSTSTNVYEDPLKNYFKESPDDQWIRAVDFTPFNCIGQSSAICLELPCDRDFP 243
Query: 726 NFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLS 905
N RE F +Y+E+E QY LESG FS N D+VPIVAPPQGI IPFDILFKVNSLVQHG LS
Sbjct: 244 NIREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHGCLS 303
Query: 906 GSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
GS LDN FY +VDP ++N++FIEHALEKMYYSKDFCYEP RWL QY+ YL
Sbjct: 304 GSELDNAFYCLVDPLRINVDFIEHALEKMYYSKDFCYEPARWLKDQYRMYL 354
Score = 300 bits (769), Expect = 4e-87
Identities = 151/180 (83%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL DQY+ YL+SN P +SP ISLD GLVYVRRVQITPCKVYF GPEINVSNRV+RH
Sbjct: 341 EPARWLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRH 400
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F+EHI+NFLRVSFVDEELDKLYSTDLSSR S G +TE+YNR+LSILRNGI+IGDKKFEFL
Sbjct: 401 FHEHIDNFLRVSFVDEELDKLYSTDLSSRISVGVRTEVYNRILSILRNGIVIGDKKFEFL 460
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMFAPT TG TA IR WMGDF IRNVAKYAARLGQSFGSSTETLSV
Sbjct: 461 AFSSSQLRENSLWMFAPTATGLTAQFIRAWMGDFSQIRNVAKYAARLGQSFGSSTETLSV 520
>XP_003518619.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycine max]
XP_006574822.1 PREDICTED: RNA-dependent RNA polymerase 1
[Glycine max] XP_006574823.1 PREDICTED: RNA-dependent RNA
polymerase 1 [Glycine max] KHN15461.1 RNA-dependent RNA
polymerase 1 [Glycine soja] KRH70363.1 hypothetical
protein GLYMA_02G086100 [Glycine max]
Length = 1125
Score = 501 bits (1289), Expect = e-163
Identities = 246/356 (69%), Positives = 292/356 (82%), Gaps = 3/356 (0%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+YGFP++V VS VK F+EQYTGE TVFAIK+R GKGRVPRAFAIIQFT+A AT
Sbjct: 1 MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSAT 60
Query: 195 HMLSLAD---KSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLW 365
M+S A+ ++L Y SYLK RE+ERDIVPRPR FL SL++VKL FGCQISKGR SVLW
Sbjct: 61 SMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLW 120
Query: 366 KKVNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGA 545
KK DV V+FG GMRK F H + +YKLELSYENIWKIEL++P+ ETT+YLLIQL GA
Sbjct: 121 KK-QDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGA 179
Query: 546 PRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFP 725
PR+F+ +PTS NI++DPL N+FKD PDEQWIRAIDFTP S IGQSSA+CLELP+ + P
Sbjct: 180 PRVFENDVPTSTNIFDDPLFNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLP 239
Query: 726 NFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLS 905
NFRENFAYYEESE+QY L++G FS+N LVPIVAPP G++I +DILFKVNSLVQH L+
Sbjct: 240 NFRENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLA 299
Query: 906 GSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLKX*TH 1073
G LD +FY +VDPR++ EFIE+ALEK+YYSK+FCYEPT+WL QYK YL+ H
Sbjct: 300 GPALDGDFYRLVDPRRMPREFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNH 355
Score = 314 bits (805), Expect = 3e-92
Identities = 153/179 (85%), Positives = 163/179 (91%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EPT WL DQYK YL S N PRSP ISLDTGLVYVRRVQITPCKVYF GPE+NVSNRVLRH
Sbjct: 337 EPTKWLTDQYKTYLESKNHPRSPAISLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRH 396
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSRSDGSKTEIYNRVLSILRNGIIIGDKKFEFLA 1425
F EHI+NFLRVSFVDEELDKL+STDLSSRS KTEIY R+LSIL+NGI++GDKKFEFLA
Sbjct: 397 FREHIDNFLRVSFVDEELDKLFSTDLSSRSQNKKTEIYTRILSILKNGIVVGDKKFEFLA 456
Query: 1426 FSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
FSSSQLRENSLWMFAPT TGCTAA+IR+WMG+F IRNVAKYAARLGQSFGSSTETLSV
Sbjct: 457 FSSSQLRENSLWMFAPTETGCTAAYIRKWMGNFSQIRNVAKYAARLGQSFGSSTETLSV 515
>XP_016175443.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Arachis ipaensis]
XP_016175444.1 PREDICTED: RNA-dependent RNA polymerase
1-like [Arachis ipaensis] XP_016175445.1 PREDICTED:
RNA-dependent RNA polymerase 1-like [Arachis ipaensis]
Length = 1116
Score = 496 bits (1278), Expect = e-161
Identities = 236/348 (67%), Positives = 285/348 (81%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+YGFP VTV +VK ++E TGE TV A+KIRQGKG+VPRAFAIIQFTSA +A+
Sbjct: 1 MGKTIELYGFPYYVTVDVVKTYVEHITGEGTVLAVKIRQGKGKVPRAFAIIQFTSASNAS 60
Query: 195 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 374
H+LS A K LW+ NSYLK RE+ +DIVP+PR+ LNNVKLYFGCQ+SK R SVLW+ +
Sbjct: 61 HILSKATKKLWFGNSYLKAREMIKDIVPKPRSSQHCLNNVKLYFGCQLSKERFSVLWRNM 120
Query: 375 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 554
DV + FG GMRK+ FFL H +++YKLEL YENIWKIEL++P+GET YLLIQL GAPRI
Sbjct: 121 -DVRLSFGYGMRKFHFFLSHNNSEYKLELYYENIWKIELHRPRGETANYLLIQLLGAPRI 179
Query: 555 FKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFR 734
F+ TS +IY+ PL N++KD PD+QWIRA DFTPCS IGQSSAL +ELP DQ FP+FR
Sbjct: 180 FEKEESTSGDIYDHPLFNFYKDVPDDQWIRATDFTPCSSIGQSSALVIELPYDQQFPDFR 239
Query: 735 ENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSG 914
ENF YYEESE+Q+ L +G FS N DLVPIV PPQGI+IP+DILFKVNSLVQHG L+G
Sbjct: 240 ENFGYYEESERQFTLVTGVPFSSNLDLVPIVTPPQGIQIPYDILFKVNSLVQHGSLAGPS 299
Query: 915 LDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
LD++FY +VDP ++ LEFIEHALEKM+YSK+FCYEP +WL QY+RY+
Sbjct: 300 LDDDFYRLVDPYRMKLEFIEHALEKMFYSKEFCYEPIKWLSDQYRRYI 347
Score = 301 bits (772), Expect = 1e-87
Identities = 151/183 (82%), Positives = 164/183 (89%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSN---NPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRV 1236
EP WL DQY+RY+S N NPPRSP ISLDTGLVYV+RVQITPCKVYF GPEINVSNRV
Sbjct: 334 EPIKWLSDQYRRYISGNALGNPPRSPAISLDTGLVYVKRVQITPCKVYFCGPEINVSNRV 393
Query: 1237 LRHFNEHINNFLRVSFVDEELDKLYSTDLSSRSD-GSKTEIYNRVLSILRNGIIIGDKKF 1413
LRHF++ ++NFLRVSFVDEEL+KLYSTDLS R+ KTEIY R+LSILR+GI IGDKKF
Sbjct: 394 LRHFHQDLDNFLRVSFVDEELEKLYSTDLSPRTSVNRKTEIYTRILSILRDGITIGDKKF 453
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
EFLAFSSSQLRENSLWMFAPT TGCTAA+IREWMGDFR IRNVAKYAARLGQSFGSSTET
Sbjct: 454 EFLAFSSSQLRENSLWMFAPTATGCTAAYIREWMGDFRNIRNVAKYAARLGQSFGSSTET 513
Query: 1594 LSV 1602
L+V
Sbjct: 514 LTV 516
>XP_015940506.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Arachis duranensis]
XP_015940507.1 PREDICTED: RNA-dependent RNA polymerase
1-like [Arachis duranensis] XP_015940508.1 PREDICTED:
RNA-dependent RNA polymerase 1-like [Arachis duranensis]
XP_015940509.1 PREDICTED: RNA-dependent RNA polymerase
1-like [Arachis duranensis]
Length = 1116
Score = 496 bits (1277), Expect = e-161
Identities = 237/348 (68%), Positives = 284/348 (81%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+YGFP VTV +VK ++EQ TGE TV A+KIRQGKG+VPRAFAIIQFTSA +A+
Sbjct: 1 MGKTIELYGFPYYVTVDVVKTYVEQITGEGTVLAVKIRQGKGKVPRAFAIIQFTSASNAS 60
Query: 195 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 374
H+LS A K LW+ NSYLK RE+ +DIVP+PR+ LNNVKLYFGCQ+SK R SVLW+ +
Sbjct: 61 HILSKATKKLWFGNSYLKAREMIKDIVPKPRSSQHCLNNVKLYFGCQLSKERFSVLWRNM 120
Query: 375 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 554
DV + FG GMRK+ FFL H +++YKLEL YENIWKIE +QP+GET YLLIQL GAPRI
Sbjct: 121 -DVRLCFGYGMRKFHFFLSHNNSEYKLELYYENIWKIERHQPRGETANYLLIQLLGAPRI 179
Query: 555 FKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFR 734
F+ TS +IY+ PL N++KD PD+QWIRA DFTPCS IGQSSAL +ELP DQ FP+FR
Sbjct: 180 FEKEESTSGDIYDHPLFNFYKDVPDDQWIRATDFTPCSSIGQSSALVIELPYDQQFPDFR 239
Query: 735 ENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSG 914
ENF YYEESE+Q+ L +G FS N DLVPIV PPQGI+IP+DILFKVNSLVQHG L+G
Sbjct: 240 ENFGYYEESERQFTLVTGVPFSSNLDLVPIVTPPQGIQIPYDILFKVNSLVQHGSLAGPS 299
Query: 915 LDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
LD+ FY +VDP ++ LEFIEHALEKM+YSK+FCYEP +WL QY+RY+
Sbjct: 300 LDDGFYRLVDPYRMKLEFIEHALEKMFYSKEFCYEPIKWLSDQYRRYI 347
Score = 299 bits (766), Expect = 9e-87
Identities = 150/183 (81%), Positives = 164/183 (89%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSN---NPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRV 1236
EP WL DQY+RY+S N NPPRSP ISLDTGLVYV+RVQITPCKVYF GPEINVSNRV
Sbjct: 334 EPIKWLSDQYRRYISGNALGNPPRSPAISLDTGLVYVKRVQITPCKVYFCGPEINVSNRV 393
Query: 1237 LRHFNEHINNFLRVSFVDEELDKLYSTDLSSRSD-GSKTEIYNRVLSILRNGIIIGDKKF 1413
LRHF++ ++NFLRVSFVDEEL+KLYSTDLS R+ KT+IY R+LSILR+GI IGDKKF
Sbjct: 394 LRHFHQDLDNFLRVSFVDEELEKLYSTDLSPRTSVNRKTKIYTRLLSILRDGITIGDKKF 453
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
EFLAFSSSQLRENSLWMFAPT TGCTAA+IREWMGDFR IRNVAKYAARLGQSFGSSTET
Sbjct: 454 EFLAFSSSQLRENSLWMFAPTATGCTAAYIREWMGDFRNIRNVAKYAARLGQSFGSSTET 513
Query: 1594 LSV 1602
L+V
Sbjct: 514 LTV 516
>XP_013466600.1 RNA-directed RNA polymerase [Medicago truncatula] KEH40642.1
RNA-directed RNA polymerase [Medicago truncatula]
Length = 1117
Score = 496 bits (1277), Expect = e-161
Identities = 248/351 (70%), Positives = 285/351 (81%), Gaps = 6/351 (1%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+YGFP VTV VKRF+EQYTGE +V AIKIR+GK R+ AFAIIQFT+ H T M
Sbjct: 5 KTIELYGFPHYVTVPDVKRFVEQYTGEGSVVAIKIREGKARIRTAFAIIQFTTKDHVTDM 64
Query: 201 LSLADKSL---WYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
++L +SL Y +SYLKVRE+ERDIV RPR L SLN+VKLYF CQIS+ R+SVLW++
Sbjct: 65 MALPSRSLSPLQYGSSYLKVREMERDIVRRPREILHSLNDVKLYFCCQISEERLSVLWRE 124
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
V DV VDFGIGMRKWRF L H + +KLELSYENIWKIEL+QP+ +TTKYLLIQL GAPR
Sbjct: 125 V-DVRVDFGIGMRKWRFTLCHDNKTFKLELSYENIWKIELHQPRSKTTKYLLIQLIGAPR 183
Query: 552 IFKMVIPTSA---NIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDF 722
+F++ PTS N+YED NYF D PD+QWIRA+DFTPCSCIGQSSALCLELP ++DF
Sbjct: 184 VFELYSPTSDDAYNVYEDLSKNYFSDPPDDQWIRAVDFTPCSCIGQSSALCLELPSNRDF 243
Query: 723 PNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYL 902
PNFRENFA YEES Y LESG FS N D+VP+V+PPQGI+IPFDILFKVNSLVQHG L
Sbjct: 244 PNFRENFAQYEESAGPYMLESGSPFSCNLDVVPMVSPPQGIQIPFDILFKVNSLVQHGCL 303
Query: 903 SGSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRY 1055
SGS LDN FYH+VDP +VN+E IE+ALEKMYYS DFCYEP RWL QYK Y
Sbjct: 304 SGSELDNAFYHLVDPTRVNVELIENALEKMYYSNDFCYEPVRWLKDQYKMY 354
Score = 283 bits (725), Expect = 5e-81
Identities = 144/180 (80%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL DQYK Y SSNN PRSP ISLD GLVYVRR QITPCKVYF GPEINVSNRVLR
Sbjct: 342 EPVRWLKDQYKMYHSSNNLPRSPTISLDNGLVYVRRAQITPCKVYFCGPEINVSNRVLRK 401
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
+ +H++NFLRVSFVDEELDKLYS+DLSSR S G +T+IY R+LSILRNGI+IGDKKFEFL
Sbjct: 402 YKKHMDNFLRVSFVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFL 461
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRE+SLWMFA T TG TA IREWMGDF I+NVAKYAARLGQSFGSSTET +V
Sbjct: 462 AFSSSQLRESSLWMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTV 521
>XP_013466608.1 RNA-directed RNA polymerase [Medicago truncatula] KEH40649.1
RNA-directed RNA polymerase [Medicago truncatula]
Length = 1726
Score = 491 bits (1265), Expect = e-154
Identities = 241/350 (68%), Positives = 288/350 (82%), Gaps = 3/350 (0%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+ GFP TV VK F+E YTGE +V A+KIR+GKG V RAFAIIQFT+AKHAT+M
Sbjct: 614 KTIELSGFPCYETVYDVKSFVEHYTGEGSVVAMKIREGKGHVRRAFAIIQFTTAKHATYM 673
Query: 201 LSLADKSL--WYSNSY-LKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
++L++ SL W Y LKVRE+ERDI PRPR FL+SL++VKL+FGCQISK R S LW++
Sbjct: 674 MTLSNISLPTWRYGGYDLKVREMERDINPRPRAFLESLDDVKLHFGCQISKERFSALWRE 733
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
V DVSV+FGIGMRKWRF + H D K+KLELSYENI KIEL++P+G+T KYLLIQL GAP+
Sbjct: 734 V-DVSVEFGIGMRKWRFSMRHHDKKFKLELSYENIGKIELHRPRGKTAKYLLIQLIGAPQ 792
Query: 552 IFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNF 731
+F++ IP S N+YEDP NY+KD+PDEQW R+IDFTP SCIG SSALC+ELP ++DFPNF
Sbjct: 793 VFELYIPNSKNVYEDPAKNYYKDSPDEQWTRSIDFTPFSCIGHSSALCIELPSNRDFPNF 852
Query: 732 RENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGS 911
RENFA+YEE E Y LE G FSRN D+VPIVAPP+GI IPFDI+FKVN+LVQHG LSGS
Sbjct: 853 RENFAHYEEIEGNYTLERGLPFSRNLDVVPIVAPPRGINIPFDIMFKVNALVQHGCLSGS 912
Query: 912 GLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
LDN+FY +VDP K+ + +EHALEKMYYSKDFCYEP RWL QYK Y+K
Sbjct: 913 ELDNDFYRLVDPLKMTSDCVEHALEKMYYSKDFCYEPARWLKDQYKMYIK 962
Score = 490 bits (1261), Expect = e-154
Identities = 240/350 (68%), Positives = 287/350 (82%), Gaps = 3/350 (0%)
Frame = +3
Query: 21 KTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHATHM 200
KTIE+ GFP TV VK F+E YTGE +V A+KIR+GKG V R FAIIQFT+AKHAT+M
Sbjct: 5 KTIELSGFPCYETVYDVKSFVEHYTGEGSVVAMKIREGKGHVRRTFAIIQFTTAKHATYM 64
Query: 201 LSLADKSL--WYSNSY-LKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
++L++ SL W Y LKVRE+ERDI PRPR FL+SL++VKL+FGCQISK R S LW++
Sbjct: 65 MTLSNISLPTWRYGGYDLKVREMERDINPRPRAFLESLDDVKLHFGCQISKERFSALWRE 124
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
V DVSV+FGIGMRKWRF + H D K+KLELSYENI KIEL++P+G+T KYLLIQL GAP+
Sbjct: 125 V-DVSVEFGIGMRKWRFSMRHHDKKFKLELSYENIGKIELHRPRGKTAKYLLIQLIGAPQ 183
Query: 552 IFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNF 731
+F++ IP S N+YEDP NY+KD+PDEQW R+IDFTP SCIG SSALC+ELP ++DFPNF
Sbjct: 184 VFELYIPNSKNVYEDPAKNYYKDSPDEQWTRSIDFTPFSCIGHSSALCIELPSNRDFPNF 243
Query: 732 RENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGS 911
RENFA+YEE E Y LE G FSRN D+VPIVAPP+GI IPFDI+FKVN+LVQHG LSGS
Sbjct: 244 RENFAHYEEIEGNYTLERGLPFSRNLDVVPIVAPPRGINIPFDIMFKVNALVQHGCLSGS 303
Query: 912 GLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
LDN+FY +VDP K+ + +EHALEKMYYSKDFCYEP RWL QYK Y+K
Sbjct: 304 ELDNDFYRLVDPLKMTSDCVEHALEKMYYSKDFCYEPARWLKDQYKMYIK 353
Score = 277 bits (709), Expect = 6e-78
Identities = 143/180 (79%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL DQYK Y+ SN P SP ISLD GLVYVRRVQITP KVYF GPEINVSNRVLR
Sbjct: 339 EPARWLKDQYKMYIKSNYLPPSPTISLDDGLVYVRRVQITPSKVYFCGPEINVSNRVLRR 398
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F++HI+NFLRVSFVDE LDKLYS DLSS S+ +T+IY R+LSILRNGI IG KKFEFL
Sbjct: 399 FHKHIDNFLRVSFVDEGLDKLYSADLSSHISESGRTKIYYRILSILRNGIDIGGKKFEFL 458
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMF+PTTTG TA IREWMGDF I+NVAKYAARLGQSFGSSTETLSV
Sbjct: 459 AFSSSQLRENSLWMFSPTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSV 518
Score = 277 bits (709), Expect = 6e-78
Identities = 143/180 (79%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP WL DQYK Y+ SN P SP ISLD GLVYVRRVQITP KVYF GPEINVSNRVLR
Sbjct: 948 EPARWLKDQYKMYIKSNYLPPSPTISLDDGLVYVRRVQITPSKVYFCGPEINVSNRVLRR 1007
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F++HI+NFLRVSFVDE LDKLYS DLSS S+ +T+IY R+LSILRNGI IG KKFEFL
Sbjct: 1008 FHKHIDNFLRVSFVDEGLDKLYSADLSSHISESGRTKIYYRILSILRNGIDIGGKKFEFL 1067
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMF+PTTTG TA IREWMGDF I+NVAKYAARLGQSFGSSTETLSV
Sbjct: 1068 AFSSSQLRENSLWMFSPTTTGLTADSIREWMGDFSRIKNVAKYAARLGQSFGSSTETLSV 1127
>XP_019461464.1 PREDICTED: RNA-dependent RNA polymerase 1 [Lupinus angustifolius]
OIW01897.1 hypothetical protein TanjilG_15222 [Lupinus
angustifolius]
Length = 1118
Score = 475 bits (1222), Expect = e-153
Identities = 234/351 (66%), Positives = 278/351 (79%), Gaps = 3/351 (0%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+YGFPS VT + V +F+E+Y GE VFA+K+RQGKGRVPRAFAIIQF SAK A
Sbjct: 1 MGKTIELYGFPSYVTATTVIQFVERYIGEGAVFALKLRQGKGRVPRAFAIIQFASAKDAA 60
Query: 195 HMLSLADKS---LWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLW 365
MLSLA+ S L Y SYLK RE+ERDIVP+P TFL +LNNV LYFGCQISK + SV +
Sbjct: 61 DMLSLANNSAQMLQYGTSYLKAREMERDIVPKPITFLHNLNNVNLYFGCQISKEKFSVFF 120
Query: 366 KKVNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGA 545
K+V D SV FG GMRK + FL + +YK+ELSYENIWKIEL+QP+ ET KYL+IQL GA
Sbjct: 121 KQV-DASVKFGTGMRKLQIFLSNSRAQYKMELSYENIWKIELHQPRSETAKYLIIQLLGA 179
Query: 546 PRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFP 725
PRIF+ PTS NIYE+PL NYF+D PD+ WIR IDFTP SCIGQSSA+CLE P Q FP
Sbjct: 180 PRIFEKDEPTSENIYENPLFNYFRDIPDDHWIRTIDFTPSSCIGQSSAICLEFPFGQHFP 239
Query: 726 NFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLS 905
N +ENFA+YE SE+QY LESG RN L PIV PQ I+IP+DILFKVNSLVQHG ++
Sbjct: 240 NLKENFAHYELSERQYMLESGLPLYRNSGLAPIVTSPQHIKIPYDILFKVNSLVQHGCVA 299
Query: 906 GSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
G LDN+FYH+VDP +++L FIEHALE+MY+ K+FCY+PT WL QY++YL
Sbjct: 300 GCALDNDFYHLVDPCRMDLAFIEHALEQMYHLKEFCYKPTNWLTDQYRKYL 350
Score = 302 bits (773), Expect = 1e-87
Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
+PT+WL DQY++YL+S NPPRSP ISLD GLVYVRRVQITPCKVYF GPEINVSNRVLRH
Sbjct: 337 KPTNWLTDQYRKYLTSRNPPRSPSISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVLRH 396
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR-SDGSKTEIYNRVLSILRNGIIIGDKKFEFL 1422
F++H +NFLRVSFVDEELDKLYSTDLS R S KTEIYNR+LSIL+NGI IGDKKFEFL
Sbjct: 397 FHQHGDNFLRVSFVDEELDKLYSTDLSPRTSVNKKTEIYNRILSILKNGIDIGDKKFEFL 456
Query: 1423 AFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
AFSSSQLRENSLWMFAP T GCTAA IREWMG+FR I+NVAKYAARLGQSFGSSTETLSV
Sbjct: 457 AFSSSQLRENSLWMFAP-TAGCTAASIREWMGNFRQIKNVAKYAARLGQSFGSSTETLSV 515
>KYP49993.1 putative RNA-dependent RNA polymerase 1 [Cajanus cajan]
Length = 1126
Score = 471 bits (1211), Expect = e-151
Identities = 234/356 (65%), Positives = 281/356 (78%), Gaps = 7/356 (1%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+YGFP++VTV+ VK+F+E TGE TVFAIK+R GKGR PRAFAIIQFT A HA
Sbjct: 1 MGKTIELYGFPTSVTVADVKKFVENITGEGTVFAIKLRHGKGRFPRAFAIIQFTVANHAA 60
Query: 195 HMLSLADKSLW---YSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLW 365
+M+S A+ SL Y S+LK RE+ERDIVP+PR FL SL +VKLYFGCQISKGR VLW
Sbjct: 61 YMMSKANNSLRTLRYGTSFLKAREMERDIVPKPRNFLHSLEDVKLYFGCQISKGRFYVLW 120
Query: 366 KKVNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGA 545
+ + DVS++FG GMRK F H + +YKLELSYENIWKIEL++P E +YLLIQL GA
Sbjct: 121 EML-DVSINFGSGMRKVHFLFSHNNVQYKLELSYENIWKIELHRPWAEAARYLLIQLLGA 179
Query: 546 PRIFKMVIPTSANIYED----PLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDD 713
PR+F +PTS N++E+ PL N++KD DEQWIRAIDFT SCIGQS+A+CLELP
Sbjct: 180 PRVFVNDVPTSENLFENMFDSPLFNFYKDGLDEQWIRAIDFTTYSCIGQSTAICLELPCG 239
Query: 714 QDFPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQH 893
Q PNF+ENF YYEES +QY L++G FS+N LVPIVAPPQG +IP+DILFKVNSLVQH
Sbjct: 240 QQLPNFKENFGYYEESNRQYTLQTGVPFSQNVGLVPIVAPPQGFDIPYDILFKVNSLVQH 299
Query: 894 GYLSGSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
G L+G LD +FYH+V RK+ L FIEHALEK+YYSK+FCYEPT WL +Y RYL+
Sbjct: 300 GCLAGPALDGHFYHLV--RKMPLAFIEHALEKIYYSKEFCYEPTEWLHTEYTRYLR 353
Score = 305 bits (781), Expect = 8e-89
Identities = 148/179 (82%), Positives = 162/179 (90%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EPT WL +Y RYL NP +SP ISLDTGLVYVRRVQ+TPCKVYF GPEINVSNRV+R+
Sbjct: 339 EPTEWLHTEYTRYLRLKNPRQSPAISLDTGLVYVRRVQVTPCKVYFCGPEINVSNRVIRN 398
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSRSDGSKTEIYNRVLSILRNGIIIGDKKFEFLA 1425
F+EHI+NFLRVSFVDEELDKL++TDL SR+ KTEIY R+LS+L NGI+IGDKKFEFLA
Sbjct: 399 FHEHIDNFLRVSFVDEELDKLFATDLLSRTQNKKTEIYTRILSVLTNGIVIGDKKFEFLA 458
Query: 1426 FSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
FSSSQLRENSLWMFAPTTTGCTAA+IREWMGDFR IRNVAKYAARLGQSFGSSTETLSV
Sbjct: 459 FSSSQLRENSLWMFAPTTTGCTAAYIREWMGDFRKIRNVAKYAARLGQSFGSSTETLSV 517
>XP_015937207.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Arachis duranensis]
Length = 1107
Score = 444 bits (1143), Expect = e-141
Identities = 216/348 (62%), Positives = 271/348 (77%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+ GFP VTV VK ++E TGE TVFA KIRQ +G+ R +AIIQF SA++A+
Sbjct: 1 MGKTIELSGFPFYVTVDHVKTYVEHITGEGTVFAFKIRQSQGKDQRKYAIIQFISARNAS 60
Query: 195 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 374
M+S A K L + NS LK RE+ +DIVP PR+ LNNVKL+FGCQ+S+ RISVLW+ +
Sbjct: 61 LMMSKATKKLLFGNSRLKAREMMKDIVPNPRSSQHCLNNVKLHFGCQLSEERISVLWRNM 120
Query: 375 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 554
DV + FG GMRK+ FFL H +++YKLEL Y+NIWKIEL++P+ ET YLLIQL GAPRI
Sbjct: 121 -DVRLCFGSGMRKFHFFLSHNNSEYKLELYYDNIWKIELHRPRDETANYLLIQLLGAPRI 179
Query: 555 FKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFR 734
F+ T +IY+DPL NY+KD ++QWIRAIDFTPC+CIGQS+A+ +ELPD Q FP+FR
Sbjct: 180 FEKEEYTLGDIYDDPLFNYYKDDSNDQWIRAIDFTPCNCIGQSTAIVIELPDGQHFPDFR 239
Query: 735 ENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSG 914
ENF YYEESE+ + LE+G FS N LVPIV PPQG +IP+DILFKVNSLVQHG L+G
Sbjct: 240 ENFGYYEESERPFTLETGAPFSSNLGLVPIVTPPQGTQIPYDILFKVNSLVQHGCLAGPS 299
Query: 915 LDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYL 1058
LD+ FY +VDP +V LE+IEHALEK+ YSK+ CY+P +WL QY+RY+
Sbjct: 300 LDDGFYRLVDPCRVKLEYIEHALEKISYSKESCYDPIKWLSDQYRRYI 347
Score = 286 bits (733), Expect = 4e-82
Identities = 146/183 (79%), Positives = 161/183 (87%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSN---NPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRV 1236
+P WL DQY+RY++SN P RSP ISLDTGLVYV+RVQITPCKVYF GPE+NVSNRV
Sbjct: 334 DPIKWLSDQYRRYIASNASGKPLRSPAISLDTGLVYVKRVQITPCKVYFYGPEVNVSNRV 393
Query: 1237 LRHFNEHINNFLRVSFVDEELDKLYSTDLSSRSDGS-KTEIYNRVLSILRNGIIIGDKKF 1413
LRHF + I+NFLRVSFVDEEL+KLYSTDLS R+ + KTEIY R+LSILR+GI IGDKKF
Sbjct: 394 LRHFQQDIDNFLRVSFVDEELEKLYSTDLSQRASVNIKTEIYIRILSILRDGITIGDKKF 453
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
EFLAFSSSQLRENSLWMFAPT TG TAA+IR+WMGDF IRNVAKYAARLGQSFGSSTET
Sbjct: 454 EFLAFSSSQLRENSLWMFAPTATGRTAAYIRKWMGDFHRIRNVAKYAARLGQSFGSSTET 513
Query: 1594 LSV 1602
LSV
Sbjct: 514 LSV 516
>XP_016170571.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Arachis ipaensis]
Length = 1107
Score = 443 bits (1140), Expect = e-141
Identities = 217/347 (62%), Positives = 270/347 (77%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTIE+ GFP VTV VK ++E TGE TVFA+KIRQ +G+ R FAIIQF SA++A+
Sbjct: 1 MGKTIELSGFPFYVTVDHVKTYVEHITGEGTVFAVKIRQSQGKDQRIFAIIQFISARNAS 60
Query: 195 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 374
M+S A K L + NS LK RE+ +DIVP+PR+ LNNVKL+FGCQ+S+ RISVLW+ +
Sbjct: 61 LMMSKATKKLLFGNSRLKAREMMKDIVPKPRSSQHCLNNVKLHFGCQLSEERISVLWRNM 120
Query: 375 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 554
DV + FG GMRK+ FFL H +++YKLEL Y+NIWKIEL+QP+ ET YLLIQL GAPRI
Sbjct: 121 -DVRLCFGSGMRKFHFFLSHNNSEYKLELHYDNIWKIELHQPRDETDNYLLIQLLGAPRI 179
Query: 555 FKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFR 734
F+ T +IY+DPL NY+KD ++QWIRAIDFTPC+CIGQS+A+ +ELPD Q FP+FR
Sbjct: 180 FEKEEYTLGDIYDDPLFNYYKDGSNDQWIRAIDFTPCNCIGQSTAIVIELPDGQHFPDFR 239
Query: 735 ENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSG 914
ENF YYEESE+ + LE+G FS LVPIV PPQG +IP+DILFKVNSLVQHG L+G
Sbjct: 240 ENFGYYEESERPFTLETGAPFSSILGLVPIVTPPQGTQIPYDILFKVNSLVQHGCLAGPS 299
Query: 915 LDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRY 1055
LD+ FY VDP +V LE+IEHALEK+ YSK+ CY+P +WL QY+RY
Sbjct: 300 LDDGFYRWVDPCRVKLEYIEHALEKISYSKECCYDPIKWLSDQYRRY 346
Score = 288 bits (738), Expect = 7e-83
Identities = 148/183 (80%), Positives = 160/183 (87%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSN---NPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRV 1236
+P WL DQY+RY SSN P RSP ISLDTGLVYV+RVQITPCKVYF GPEINVSNRV
Sbjct: 334 DPIKWLSDQYRRYNSSNASGKPLRSPAISLDTGLVYVKRVQITPCKVYFYGPEINVSNRV 393
Query: 1237 LRHFNEHINNFLRVSFVDEELDKLYSTDLSSRSD-GSKTEIYNRVLSILRNGIIIGDKKF 1413
LRHF + I+NFLRVSFVDEEL+KLYSTDLS R+ +KTEIY R+LSILR+GI IGDKKF
Sbjct: 394 LRHFQQDIDNFLRVSFVDEELEKLYSTDLSQRTSVNTKTEIYTRILSILRDGITIGDKKF 453
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
EFLAFSSSQLRENSLWMFAPT TG TAA+IR+WMGDF IRNVAKYAARLGQSFGSSTET
Sbjct: 454 EFLAFSSSQLRENSLWMFAPTATGRTAAYIRKWMGDFHRIRNVAKYAARLGQSFGSSTET 513
Query: 1594 LSV 1602
LSV
Sbjct: 514 LSV 516
>XP_012072325.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
Length = 1096
Score = 439 bits (1130), Expect = e-139
Identities = 209/350 (59%), Positives = 270/350 (77%)
Frame = +3
Query: 12 MMGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHA 191
+MGKTI VYGFPS+VTV VK+F+E ++GE TVFA+KIR+ K PR +AI+QF +A+ A
Sbjct: 24 LMGKTIHVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNGGPRKYAIVQFQTARDA 83
Query: 192 THMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
++SL +K LWY SYLK R ++ DIVP+PRTFL S++++ L+FGC ISK + SVLW
Sbjct: 84 ELIISLTNKRLWYGTSYLKARTLDNDIVPKPRTFLHSMDHITLHFGCHISKEKFSVLWTG 143
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
N V V+FG GMRK FFL HG YKL+LSYEN+W+IEL+ P+G + KYLLIQL GAPR
Sbjct: 144 TN-VLVNFGFGMRKLHFFLSHGQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPR 202
Query: 552 IFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNF 731
IF+ I S N++E PL NYFKDTPDEQW+R IDFTP IG SS LCLE P + P F
Sbjct: 203 IFEKEI-ASFNVFESPLFNYFKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKF 261
Query: 732 RENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGS 911
+ENF+YY+ESE + LE+G FSRN DLVPIV PP G+++PF+ILF+VN LVQ+G L GS
Sbjct: 262 QENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGS 321
Query: 912 GLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
LD++FY +VDP ++N++ IEHALEK+++ K+ CYEP+RWL QY++YLK
Sbjct: 322 ALDSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEPSRWLDEQYRKYLK 371
Score = 177 bits (448), Expect = 1e-43
Identities = 99/179 (55%), Positives = 113/179 (63%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
EP+ WL +QY++YL S PRSP ISLD+GLVYVRRVQITPCKVYF GPE+NVSNRV+RH
Sbjct: 357 EPSRWLDEQYRKYLKSKYLPRSPSISLDSGLVYVRRVQITPCKVYFCGPEVNVSNRVIRH 416
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSRSDGSKTEIYNRVLSILRNGIIIGDKKFEFLA 1425
+++ INNFLRVSFVDEEL+K+
Sbjct: 417 YSKDINNFLRVSFVDEELEKI--------------------------------------- 437
Query: 1426 FSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETLSV 1602
MFA + G TAA IREWMG+FR IRNVAKYAARLGQSFGSSTETLSV
Sbjct: 438 ------------MFA-SRYGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSV 483
>XP_010236147.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
1 [Brachypodium distachyon]
Length = 1117
Score = 299 bits (766), Expect(2) = e-137
Identities = 159/350 (45%), Positives = 226/350 (64%), Gaps = 5/350 (1%)
Frame = +3
Query: 12 MMGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVP--RAFAIIQFTSAK 185
M GKT+++ GFP+NV VK +EQ G V+A+K+R K R+FAI+QF + +
Sbjct: 1 MGGKTLQISGFPANVHADHVKDLLEQIVGAGNVYAVKLRPPKNITANSRSFAIVQFQTEE 60
Query: 186 HATHMLSLADKSLWYSNSY-LKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVL 362
+A+ + + A +++ + SY LKVR ERDIVPRPRT + +L+ L F C + + +SVL
Sbjct: 61 YASLVENAAXRNVLSTESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKENVLSVL 120
Query: 363 WKKVNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETT--KYLLIQL 536
W DVSV+FG M+K F+L KYKLELSYE+IW+I+L++P + K+LLIQ+
Sbjct: 121 WSGT-DVSVEFGFDMKKIYFYL--ECRKYKLELSYESIWEIQLHRPPAYRSQKKFLLIQV 177
Query: 537 QGAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQ 716
+ AP+I+++ + ++EDPL NYF+D D+QW R DFTP + IGQS LCLELP
Sbjct: 178 EAAPKIYELNQRRAGFMFEDPLFNYFRDDTDDQWTRTTDFTPSASIGQSFILCLELPYHH 237
Query: 717 DFPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHG 896
D P R+ F YYEE + SG+++S + VP V I++P++ILFK+N LVQ+G
Sbjct: 238 DLPKIRDYFVYYEEHNDDFHCRSGHSYSCDTRFVPNVKSHHFIDVPYEILFKINHLVQNG 297
Query: 897 YLSGSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQY 1046
LSG LD+NF+ MV P V+++ I+ ALEK+ Y K C PT WL QY
Sbjct: 298 TLSGPTLDDNFFRMVSPGFVSIDHIKRALEKLSYQKKTCLNPTNWLSEQY 347
Score = 220 bits (561), Expect(2) = e-137
Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 4/182 (2%)
Frame = +1
Query: 1069 PTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRHF 1248
PT+WL +QY S SP ISLD GLVYV R Q+TP KVYF GPEINVSNRV+RH+
Sbjct: 339 PTNWLSEQYAIIKRSRYVLASPNISLDDGLVYVYRAQVTPAKVYFYGPEINVSNRVVRHY 398
Query: 1249 NEHINNFLRVSFVDEELDKLYSTDLSSRS----DGSKTEIYNRVLSILRNGIIIGDKKFE 1416
+ NFLR+SFVDE+ +KL STDLS RS +T +YNRVLS+L NG+ IGDK FE
Sbjct: 399 AADLENFLRISFVDEDCEKLRSTDLSPRSAPGDSTRRTALYNRVLSVLSNGLTIGDKHFE 458
Query: 1417 FLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETL 1596
FLAFSSSQLR+NS WMFA + G +A+ IR+WMG+F IRNVAKYAARLGQS SSTETL
Sbjct: 459 FLAFSSSQLRDNSAWMFA-SRPGLSASDIRQWMGNFCNIRNVAKYAARLGQSLSSSTETL 517
Query: 1597 SV 1602
V
Sbjct: 518 KV 519
>XP_012072320.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 428 bits (1101), Expect = e-135
Identities = 207/354 (58%), Positives = 271/354 (76%)
Frame = +3
Query: 12 MMGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHA 191
+MGKTI+VYGFPS+VTV VK+F+E ++GE TVFA+KIR+ K R R +AI+QF +A+ A
Sbjct: 17 LMGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRKYAIVQFQTARDA 76
Query: 192 THMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKK 371
++SL +K L Y SYLK R ++ DIVP+PRTFL S++++ L+FGCQISK + SVLW
Sbjct: 77 ELIISLTNKRLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTG 136
Query: 372 VNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPR 551
N VSV+FG GMRK +FFL HG YKLELSYEN+W++EL+ P+G + KYLLIQL GAPR
Sbjct: 137 TN-VSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPR 195
Query: 552 IFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNF 731
IF+ I T N++E PL N KDTPDEQW+R IDFTP IG SS LCLE P + P F
Sbjct: 196 IFEKEIATF-NVFEIPLFNDLKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKF 254
Query: 732 RENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGS 911
+ENF+YY+ESE + LE+G FSRN DLVPIV PP G+++PF+ILF+VN LVQ+G L GS
Sbjct: 255 QENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGS 314
Query: 912 GLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLKX*TH 1073
LD++FY +VDP +N++ IEHAL+K+++ K+ CY+P+RWL QY++YLK H
Sbjct: 315 ALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCH 368
Score = 262 bits (669), Expect = 4e-73
Identities = 132/183 (72%), Positives = 155/183 (84%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
+P+ WL +QY++YL S PRSP ISL +GLVY+RRVQITPCKVYF GPE+NVSNRV+RH
Sbjct: 350 DPSRWLDEQYRKYLKSKCHPRSPSISLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRH 409
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDL----SSRSDGSKTEIYNRVLSILRNGIIIGDKKF 1413
+++ INNFLRVSFVDEEL+K+YSTDL SS + +T IY R+LS L+NGI+IG+K+F
Sbjct: 410 YSKDINNFLRVSFVDEELEKIYSTDLCPRASSGNGDRRTAIYKRILSTLQNGIVIGNKRF 469
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
EFLAFSSSQLRENS WMFA + G TAA IREWMG+FR IRNVAKYAARLGQSFGSSTET
Sbjct: 470 EFLAFSSSQLRENSCWMFA-SRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTET 528
Query: 1594 LSV 1602
LSV
Sbjct: 529 LSV 531
>XP_012072321.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] XP_012072322.1 PREDICTED: RNA-dependent RNA
polymerase 1-like isoform X2 [Jatropha curcas]
XP_012072324.1 PREDICTED: RNA-dependent RNA polymerase
1-like isoform X2 [Jatropha curcas]
Length = 1127
Score = 427 bits (1099), Expect = e-134
Identities = 207/353 (58%), Positives = 270/353 (76%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTI+VYGFPS+VTV VK+F+E ++GE TVFA+KIR+ K R R +AI+QF +A+ A
Sbjct: 1 MGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETKNRGRRKYAIVQFQTARDAE 60
Query: 195 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 374
++SL +K L Y SYLK R ++ DIVP+PRTFL S++++ L+FGCQISK + SVLW
Sbjct: 61 LIISLTNKRLRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEKFSVLWTGT 120
Query: 375 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 554
N VSV+FG GMRK +FFL HG YKLELSYEN+W++EL+ P+G + KYLLIQL GAPRI
Sbjct: 121 N-VSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLIQLYGAPRI 179
Query: 555 FKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFR 734
F+ I T N++E PL N KDTPDEQW+R IDFTP IG SS LCLE P + P F+
Sbjct: 180 FEKEIATF-NVFEIPLFNDLKDTPDEQWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQ 238
Query: 735 ENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSG 914
ENF+YY+ESE + LE+G FSRN DLVPIV PP G+++PF+ILF+VN LVQ+G L GS
Sbjct: 239 ENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSGVDLPFEILFRVNLLVQNGCLPGSA 298
Query: 915 LDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLKX*TH 1073
LD++FY +VDP +N++ IEHAL+K+++ K+ CY+P+RWL QY++YLK H
Sbjct: 299 LDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDPSRWLDEQYRKYLKSKCH 351
Score = 262 bits (669), Expect = 3e-73
Identities = 132/183 (72%), Positives = 155/183 (84%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
+P+ WL +QY++YL S PRSP ISL +GLVY+RRVQITPCKVYF GPE+NVSNRV+RH
Sbjct: 333 DPSRWLDEQYRKYLKSKCHPRSPSISLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRH 392
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDL----SSRSDGSKTEIYNRVLSILRNGIIIGDKKF 1413
+++ INNFLRVSFVDEEL+K+YSTDL SS + +T IY R+LS L+NGI+IG+K+F
Sbjct: 393 YSKDINNFLRVSFVDEELEKIYSTDLCPRASSGNGDRRTAIYKRILSTLQNGIVIGNKRF 452
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
EFLAFSSSQLRENS WMFA + G TAA IREWMG+FR IRNVAKYAARLGQSFGSSTET
Sbjct: 453 EFLAFSSSQLRENSCWMFA-SRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTET 511
Query: 1594 LSV 1602
LSV
Sbjct: 512 LSV 514
>XP_018856654.1 PREDICTED: RNA-dependent RNA polymerase 1 [Juglans regia]
XP_018856655.1 PREDICTED: RNA-dependent RNA polymerase 1
[Juglans regia] XP_018856657.1 PREDICTED: RNA-dependent
RNA polymerase 1 [Juglans regia]
Length = 1131
Score = 426 bits (1094), Expect = e-134
Identities = 204/349 (58%), Positives = 266/349 (76%)
Frame = +3
Query: 15 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 194
MGKTI + GFPS+VT V+ F+E++TGE TV+AIKIR + RA A +QFTS +HA
Sbjct: 1 MGKTIHLSGFPSSVTAQEVQEFLERHTGEGTVYAIKIRPNRSGGQRANATVQFTSNRHAE 60
Query: 195 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 374
++SLA+ LWY SYLK E ERDIVP+PRTFL SL N+ L+FGCQIS + S+LW+ V
Sbjct: 61 SIISLANVRLWYGRSYLKAWERERDIVPKPRTFLHSLENIILHFGCQISNEKFSILWRAV 120
Query: 375 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 554
N V V+FG G+RK++F L +YKLE SYENIW+IEL++P+G+T KYLLIQL GAPRI
Sbjct: 121 N-VCVNFGTGLRKFQFVLSLNSVEYKLEFSYENIWQIELHRPRGQTAKYLLIQLFGAPRI 179
Query: 555 FKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQDFPNFR 734
++ S N+YE+PL N+FKD PD+QW+R +DFTP CIGQSS+LCLELP P+FR
Sbjct: 180 YEKDSQPSDNLYENPLFNFFKDIPDDQWVRGVDFTPSCCIGQSSSLCLELPHGHQLPDFR 239
Query: 735 ENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGYLSGSG 914
ENFAYY+ESE +Y LESG TFS N DLVPIV P G+++P++ILFK+NSLVQ+G L+G
Sbjct: 240 ENFAYYKESEGRYILESGSTFSCNLDLVPIVGPSPGVDLPYEILFKINSLVQNGCLAGPT 299
Query: 915 LDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQYKRYLK 1061
LD FY +V+PR +N++ IEHAL+K+ + ++ CY+P WL QY++YLK
Sbjct: 300 LDVRFYRLVNPRTINIDCIEHALDKLSHIQECCYDPLMWLNEQYRKYLK 348
Score = 246 bits (628), Expect = 1e-67
Identities = 127/183 (69%), Positives = 151/183 (82%), Gaps = 4/183 (2%)
Frame = +1
Query: 1066 EPTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRH 1245
+P WL +QY++YL + +PP+SP IS D+GL YVRRVQITP KVYF GPEINVSNRVLR+
Sbjct: 334 DPLMWLNEQYRKYLKARHPPKSPAIS-DSGLCYVRRVQITPSKVYFCGPEINVSNRVLRY 392
Query: 1246 FNEHINNFLRVSFVDEELDKLYSTDLSSR----SDGSKTEIYNRVLSILRNGIIIGDKKF 1413
F + I+NFLRVSFVDE+LDK++STDLSSR ++ KT IY R+LS+LRNGI+ KKF
Sbjct: 393 FRDDIDNFLRVSFVDEDLDKMFSTDLSSRVSSANEDRKTGIYKRILSVLRNGIVFAGKKF 452
Query: 1414 EFLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTET 1593
E LAFSSSQLR+NS+WMFA + G TAA IR WMG+F IRNVAKYAARLGQSFGSSTET
Sbjct: 453 ETLAFSSSQLRDNSIWMFA-SRHGLTAADIRAWMGNFCHIRNVAKYAARLGQSFGSSTET 511
Query: 1594 LSV 1602
L+V
Sbjct: 512 LTV 514
>KQK02024.1 hypothetical protein BRADI_3g59910 [Brachypodium distachyon]
Length = 1088
Score = 286 bits (733), Expect(2) = e-133
Identities = 157/349 (44%), Positives = 217/349 (62%), Gaps = 4/349 (1%)
Frame = +3
Query: 12 MMGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVP--RAFAIIQFTSAK 185
M GKT+++ GFP+NV VK +EQ G V+A+K+R K R+FAI+Q
Sbjct: 1 MGGKTLQISGFPANVHADHVKDLLEQIVGAGNVYAVKLRPPKNITANSRSFAIVQ----- 55
Query: 186 HATHMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLW 365
++LS + YLKVR ERDIVPRPRT + +L+ L F C + + +SVLW
Sbjct: 56 ---NVLST-------ESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKENVLSVLW 105
Query: 366 KKVNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETT--KYLLIQLQ 539
DVSV+FG M+K F+L KYKLELSYE+IW+I+L++P + K+LLIQ++
Sbjct: 106 SGT-DVSVEFGFDMKKIYFYL--ECRKYKLELSYESIWEIQLHRPPAYRSQKKFLLIQVE 162
Query: 540 GAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 719
AP+I+++ + ++EDPL NYF+D D+QW R DFTP + IGQS LCLELP D
Sbjct: 163 AAPKIYELNQRRAGFMFEDPLFNYFRDDTDDQWTRTTDFTPSASIGQSFILCLELPYHHD 222
Query: 720 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVNSLVQHGY 899
P R+ F YYEE + SG+++S + VP V I++P++ILFK+N LVQ+G
Sbjct: 223 LPKIRDYFVYYEEHNDDFHCRSGHSYSCDTRFVPNVKSHHFIDVPYEILFKINHLVQNGT 282
Query: 900 LSGSGLDNNFYHMVDPRKVNLEFIEHALEKMYYSKDFCYEPTRWLVGQY 1046
LSG LD+NF+ MV P V+++ I+ ALEK+ Y K C PT WL QY
Sbjct: 283 LSGPTLDDNFFRMVSPGFVSIDHIKRALEKLSYQKKTCLNPTNWLSEQY 331
Score = 220 bits (561), Expect(2) = e-133
Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 4/182 (2%)
Frame = +1
Query: 1069 PTSWLIDQYKRYLSSNNPPRSPMISLDTGLVYVRRVQITPCKVYFSGPEINVSNRVLRHF 1248
PT+WL +QY S SP ISLD GLVYV R Q+TP KVYF GPEINVSNRV+RH+
Sbjct: 323 PTNWLSEQYAIIKRSRYVLASPNISLDDGLVYVYRAQVTPAKVYFYGPEINVSNRVVRHY 382
Query: 1249 NEHINNFLRVSFVDEELDKLYSTDLSSRS----DGSKTEIYNRVLSILRNGIIIGDKKFE 1416
+ NFLR+SFVDE+ +KL STDLS RS +T +YNRVLS+L NG+ IGDK FE
Sbjct: 383 AADLENFLRISFVDEDCEKLRSTDLSPRSAPGDSTRRTALYNRVLSVLSNGLTIGDKHFE 442
Query: 1417 FLAFSSSQLRENSLWMFAPTTTGCTAAHIREWMGDFRMIRNVAKYAARLGQSFGSSTETL 1596
FLAFSSSQLR+NS WMFA + G +A+ IR+WMG+F IRNVAKYAARLGQS SSTETL
Sbjct: 443 FLAFSSSQLRDNSAWMFA-SRPGLSASDIRQWMGNFCNIRNVAKYAARLGQSLSSSTETL 501
Query: 1597 SV 1602
V
Sbjct: 502 KV 503