BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00015807
         (1082 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009242005.1 ribosomal protein S3 (mitochondrion) [Oryza minut...   173   2e-44
YP_009241985.1 ribosomal protein S3 (mitochondrion) [Oryza minut...   173   2e-44
EEF26991.1 conserved hypothetical protein [Ricinus communis] EEF...    99   4e-22
EEF49599.1 conserved hypothetical protein [Ricinus communis]           95   2e-17
XP_012575409.1 PREDICTED: uncharacterized protein LOC105852994 [...    89   5e-16
OAO89239.1 hypothetical protein AXX17_ATUG02800 (mitochondrion) ...    82   6e-16
YP_588287.1 hypothetical protein ZeamMp023 (mitochondrion) [Zea ...    75   4e-13
ABE98744.1 hypothetical protein (mitochondrion) [Zea mays subsp....    75   9e-13
ABE98701.1 hypothetical protein (mitochondrion) [Zea mays subsp....    75   1e-12
KVF63445.1 hypothetical protein Ccrd_026728 [Cynara cardunculus ...    66   3e-11
KVH87538.1 hypothetical protein Ccrd_025183 [Cynara cardunculus ...    56   4e-11
EEF30656.1 conserved hypothetical protein [Ricinus communis]           55   3e-10
KVI11367.1 cytochrome c oxidase subunit I [Cynara cardunculus va...    70   4e-10
EEF32829.1 conserved hypothetical protein [Ricinus communis]           64   2e-09
AAT77278.1 unknown protein [Oryza sativa Japonica Group] BAH9319...    53   5e-06

>YP_009242005.1 ribosomal protein S3 (mitochondrion) [Oryza minuta] AMQ23369.1
           ribosomal protein S3 (mitochondrion) [Oryza minuta]
          Length = 1150

 Score =  173 bits (439), Expect = 2e-44
 Identities = 101/155 (65%), Positives = 109/155 (70%), Gaps = 6/155 (3%)
 Frame = -1

Query: 497 EVQDTRPRNPGNH-----PLPMCRSLAHPGPRRPAELERPSLI*EVLIRFG*TSFKNAAA 333
           ++ + R R PG       PL MCRSLAHPGPRRPA LERPSLI +V +RFG T   NA  
Sbjct: 100 DIMNARIRIPGRETRASTPL-MCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALP 158

Query: 332 P-GINKKTSAKFQISE*TETKEERDLSRSAPKAHYAPLQQMRVFGGTGEPRELVRCVGQR 156
              I  K    FQISE TE   +RDLSRSAP  HYAPLQQMRVFGGTGEPRELVRCVGQR
Sbjct: 159 QESIKNKCLVSFQISELTE---KRDLSRSAP--HYAPLQQMRVFGGTGEPRELVRCVGQR 213

Query: 155 AHSTC*RSYAVEGKEPKSTPFFFIYLKNKKKEVQR 51
           A ST  RSYAVEGKEPKSTPFF  Y K +K   +R
Sbjct: 214 ARSTSLRSYAVEGKEPKSTPFFLFYSKTQKHSTKR 248



 Score =  137 bits (344), Expect = 9e-32
 Identities = 82/136 (60%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
 Frame = -2

Query: 811 MARKGNPIXXXXXXXXXXXXXXXXXXXXXSHRMGQSFPSVCPIYIC*IKKLG-RT*QMSG 635
           MARKGNPI                     SHRMG     +  I++C  KK   RT QMSG
Sbjct: 1   MARKGNPISVRLDLNRSSDPSRFSEGDRESHRMGSV--RLFLIFVCPPKKRRERTLQMSG 58

Query: 634 TDTTSSNARRPLEETRDQSMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATTP 455
           TDTTSSNARRP EETRDQSMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+TP
Sbjct: 59  TDTTSSNARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRASTP 118

Query: 454 SLCADR*RIQGPGAQR 407
            +C     +  PG +R
Sbjct: 119 LMCRS---LAHPGPRR 131


>YP_009241985.1 ribosomal protein S3 (mitochondrion) [Oryza minuta] AMA06704.1
           ribosomal protein S3 (mitochondrion) [Oryza minuta]
          Length = 1154

 Score =  173 bits (439), Expect = 2e-44
 Identities = 101/155 (65%), Positives = 109/155 (70%), Gaps = 6/155 (3%)
 Frame = -1

Query: 497 EVQDTRPRNPGNH-----PLPMCRSLAHPGPRRPAELERPSLI*EVLIRFG*TSFKNAAA 333
           ++ + R R PG       PL MCRSLAHPGPRRPA LERPSLI +V +RFG T   NA  
Sbjct: 100 DIMNARIRIPGRETRASTPL-MCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALP 158

Query: 332 P-GINKKTSAKFQISE*TETKEERDLSRSAPKAHYAPLQQMRVFGGTGEPRELVRCVGQR 156
              I  K    FQISE TE   +RDLSRSAP  HYAPLQQMRVFGGTGEPRELVRCVGQR
Sbjct: 159 QESIKNKCLVSFQISELTE---KRDLSRSAP--HYAPLQQMRVFGGTGEPRELVRCVGQR 213

Query: 155 AHSTC*RSYAVEGKEPKSTPFFFIYLKNKKKEVQR 51
           A ST  RSYAVEGKEPKSTPFF  Y K +K   +R
Sbjct: 214 ARSTSLRSYAVEGKEPKSTPFFLFYSKTQKHSTKR 248



 Score =  137 bits (344), Expect = 9e-32
 Identities = 82/136 (60%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
 Frame = -2

Query: 811 MARKGNPIXXXXXXXXXXXXXXXXXXXXXSHRMGQSFPSVCPIYIC*IKKLG-RT*QMSG 635
           MARKGNPI                     SHRMG     +  I++C  KK   RT QMSG
Sbjct: 1   MARKGNPISVRLDLNRSSDPSRFSEGDRESHRMGSV--RLFLIFVCPPKKRRERTLQMSG 58

Query: 634 TDTTSSNARRPLEETRDQSMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATTP 455
           TDTTSSNARRP EETRDQSMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+TP
Sbjct: 59  TDTTSSNARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRASTP 118

Query: 454 SLCADR*RIQGPGAQR 407
            +C     +  PG +R
Sbjct: 119 LMCRS---LAHPGPRR 131


>EEF26991.1 conserved hypothetical protein [Ricinus communis] EEF27071.1
           conserved hypothetical protein [Ricinus communis]
          Length = 94

 Score = 99.0 bits (245), Expect = 4e-22
 Identities = 51/66 (77%), Positives = 55/66 (83%)
 Frame = -3

Query: 717 EWVSLFLQFVLYIYVE*KSLGGRSRCPGRTRLLLTLEDHWKRPGTRACRERSTLGGRAST 538
           +WVSLFL  +L    + KS+GGR RCPGRTRLLLTLEDH   PGTRACRERSTLGGRAST
Sbjct: 33  KWVSLFLCPIL----KKKSVGGRCRCPGRTRLLLTLEDHRNIPGTRACRERSTLGGRAST 88

Query: 537 VSPGHS 520
           VSPGHS
Sbjct: 89  VSPGHS 94


>EEF49599.1 conserved hypothetical protein [Ricinus communis]
          Length = 813

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 43/44 (97%), Positives = 43/44 (97%)
 Frame = +3

Query: 456 GVVARVSRPGILHLAFMISTFNCAPETRSKHARPVCFFHDMLWS 587
           GVVARVSRPGILHLAFMISTF CAPETRSKHARPVCFFHDMLWS
Sbjct: 755 GVVARVSRPGILHLAFMISTFRCAPETRSKHARPVCFFHDMLWS 798


>XP_012575409.1 PREDICTED: uncharacterized protein LOC105852994 [Cicer arietinum]
          Length = 385

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 43/50 (86%), Positives = 47/50 (94%)
 Frame = +3

Query: 111 LLPFHCIAALAGTMSPLSHASNQLAWFTGSTENSHLLKRSIVRFRRRARK 260
           L+PF+ +AALAGTMSPLSHASNQLAWF GST+NSHLLK SIVRFRRRARK
Sbjct: 45  LIPFNYVAALAGTMSPLSHASNQLAWFIGSTKNSHLLKWSIVRFRRRARK 94



 Score = 58.9 bits (141), Expect(2) = 2e-10
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 482 WYPAPRVHDIYIQLCPGDTVEARPPSVLLSRHAL 583
           WYP PR+HDIYIQ   G+TVEARPPSVLLSRH L
Sbjct: 114 WYPTPRIHDIYIQ---GNTVEARPPSVLLSRHVL 144



 Score = 35.8 bits (81), Expect(2) = 2e-10
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +1

Query: 415 RRGPGCASDRHIGRGWLPGF 474
           R+GPGCASDRHIG G  PGF
Sbjct: 93  RKGPGCASDRHIGVG-CPGF 111


>OAO89239.1 hypothetical protein AXX17_ATUG02800 (mitochondrion) [Arabidopsis
           thaliana]
          Length = 77

 Score = 81.6 bits (200), Expect = 6e-16
 Identities = 48/80 (60%), Positives = 51/80 (63%)
 Frame = -2

Query: 811 MARKGNPIXXXXXXXXXXXXXXXXXXXXXSHRMGQSFPSVCPIYIC*IKKLGRT*QMSGT 632
           MARKGNPI                     SHRMG+SFPSV PI+    KK GRT QMSGT
Sbjct: 1   MARKGNPISVRLGKNRSSDSSRFSEGDRESHRMGKSFPSVYPIFS---KKRGRTLQMSGT 57

Query: 631 DTTSSNARRPLEETRDQSMS 572
           DTTSSNARRPLE TR+QSMS
Sbjct: 58  DTTSSNARRPLENTRNQSMS 77


>YP_588287.1 hypothetical protein ZeamMp023 (mitochondrion) [Zea mays subsp.
           mays] AAR91110.1 hypothetical protein (mitochondrion)
           [Zea mays]
          Length = 127

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 41/61 (67%), Positives = 43/61 (70%)
 Frame = -3

Query: 711 VSLFLQFVLYIYVE*KSLGGRSRCPGRTRLLLTLEDHWKRPGTRACRERSTLGGRASTVS 532
           V LFL FV       K + GR RCPGRTRLLLTLEDH K+PGTRACRER T GGRAS   
Sbjct: 4   VRLFLIFVC----PPKGVRGRCRCPGRTRLLLTLEDHRKKPGTRACRERRTRGGRASDQC 59

Query: 531 P 529
           P
Sbjct: 60  P 60


>ABE98744.1 hypothetical protein (mitochondrion) [Zea mays subsp. mays]
           ABE98789.1 hypothetical protein (mitochondrion) [Zea
           mays subsp. mays]
          Length = 159

 Score = 75.5 bits (184), Expect = 9e-13
 Identities = 41/61 (67%), Positives = 43/61 (70%)
 Frame = -3

Query: 711 VSLFLQFVLYIYVE*KSLGGRSRCPGRTRLLLTLEDHWKRPGTRACRERSTLGGRASTVS 532
           V LFL FV       K + GR RCPGRTRLLLTLEDH K+PGTRACRER T GGRAS   
Sbjct: 36  VRLFLIFVC----PPKGVRGRCRCPGRTRLLLTLEDHRKKPGTRACRERRTRGGRASDQC 91

Query: 531 P 529
           P
Sbjct: 92  P 92


>ABE98701.1 hypothetical protein (mitochondrion) [Zea mays subsp. mays]
           ABF70941.1 hypothetical protein (mitochondrion) [Zea
           mays subsp. mays]
          Length = 163

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 41/61 (67%), Positives = 43/61 (70%)
 Frame = -3

Query: 711 VSLFLQFVLYIYVE*KSLGGRSRCPGRTRLLLTLEDHWKRPGTRACRERSTLGGRASTVS 532
           V LFL FV       K + GR RCPGRTRLLLTLEDH K+PGTRACRER T GGRAS   
Sbjct: 36  VRLFLIFVC----PPKGVRGRCRCPGRTRLLLTLEDHRKKPGTRACRERRTRGGRASDQC 91

Query: 531 P 529
           P
Sbjct: 92  P 92


>KVF63445.1 hypothetical protein Ccrd_026728 [Cynara cardunculus var. scolymus]
          Length = 83

 Score = 65.9 bits (159), Expect(2) = 3e-11
 Identities = 45/89 (50%), Positives = 45/89 (50%)
 Frame = -3

Query: 597 KRPGTRACRERSTLGGRASTVSPGHS*M*IS*TRGAGYQAEKPGQPPPPYVPIXXXXXXX 418
           K PG RACRERSTL  R                    YQAEK GQP P YVPI       
Sbjct: 16  KTPGPRACRERSTLDRR--------------------YQAEKAGQPLP-YVPIASAARAP 54

Query: 417 XXXXXXXXXPDLRSANSVRIDFIQERRRP 331
                    PDLRSANSVRIDFIQE RRP
Sbjct: 55  APSSAGEASPDLRSANSVRIDFIQECRRP 83



 Score = 32.0 bits (71), Expect(2) = 3e-11
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 643 MSGTDTTSSNARRPLE 596
           MSGTDT SSNARRPL+
Sbjct: 1   MSGTDTNSSNARRPLK 16


>KVH87538.1 hypothetical protein Ccrd_025183 [Cynara cardunculus var. scolymus]
          Length = 221

 Score = 55.8 bits (133), Expect(2) = 4e-11
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -2

Query: 667 KKLGRT*QMSGTDTTSSNARRPLEETRDQSMS 572
           K+ GR  QMSGTDTTSSNARRPLE+TRDQSMS
Sbjct: 190 KRRGRALQMSGTDTTSSNARRPLEDTRDQSMS 221



 Score = 41.2 bits (95), Expect(2) = 4e-11
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 7/58 (12%)
 Frame = -1

Query: 845 KRGKSK*SLSAYGTKRKSYFGKTR-------SES*FRFKSVQ*GRPRKSPNGSVFSFS 693
           +RG+S  +L+    +R +  GKT+       S++  R KSVQ GRPRKSP GSVFSF+
Sbjct: 129 ERGRSITNLNTL-CRRTNQQGKTKGKIDDFFSQAVGRIKSVQRGRPRKSPKGSVFSFT 185


>EEF30656.1 conserved hypothetical protein [Ricinus communis]
          Length = 74

 Score = 55.5 bits (132), Expect(2) = 3e-10
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -2

Query: 163 DRGLIVPASAAMQWKGRSLNRPPSF 89
           DRGLIVPASAAMQWKGRSLNRPPSF
Sbjct: 26  DRGLIVPASAAMQWKGRSLNRPPSF 50



 Score = 38.9 bits (89), Expect(2) = 3e-10
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -3

Query: 69  KKRSTKRLDSRMRLSSHRP 13
           KK STKRLDSRMRLSSHRP
Sbjct: 54  KKSSTKRLDSRMRLSSHRP 72


>KVI11367.1 cytochrome c oxidase subunit I [Cynara cardunculus var. scolymus]
          Length = 276

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 37/52 (71%), Positives = 40/52 (76%)
 Frame = +1

Query: 331 GAAAFLNEVYPNRISTSQIRLGLSSSAGRRGPGCASDRHIGRGWLPGFLGLV 486
           GAAAFLN+VYPNRI+TS IR GL S AG R PGC S+ HI    LPGFLGLV
Sbjct: 185 GAAAFLNKVYPNRINTSHIRQGLYSRAGHRVPGCTSNWHIEES-LPGFLGLV 235


>EEF32829.1 conserved hypothetical protein [Ricinus communis]
          Length = 93

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 36/66 (54%), Positives = 40/66 (60%)
 Frame = -3

Query: 717 EWVSLFLQFVLYIYVE*KSLGGRSRCPGRTRLLLTLEDHWKRPGTRACRERSTLGGRAST 538
           +W SLFL  +L      K  G   +  G       +EDH   PGTRACRERSTLGGRAST
Sbjct: 33  KWASLFLCPILK-----KKRGRTLQMSGTDTTSSNVEDHRNIPGTRACRERSTLGGRAST 87

Query: 537 VSPGHS 520
           VSPGHS
Sbjct: 88  VSPGHS 93


>AAT77278.1 unknown protein [Oryza sativa Japonica Group] BAH93198.1
           Os05g0487600 [Oryza sativa Japonica Group]
          Length = 47

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +3

Query: 576 MLWSRVSSSGLLALEEVVSVPDICYVLPSFFI 671
           MLWSRVSS GLLALEEVVSVPDIC VL   F+
Sbjct: 1   MLWSRVSSCGLLALEEVVSVPDICNVLSRLFL 32