BLASTX nr result
ID: Glycyrrhiza28_contig00014864
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00014864
(256 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 64 4e-10
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 57 1e-07
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 55 5e-07
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 54 1e-06
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 54 1e-06
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 54 1e-06
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 54 1e-06
AAX19931.1 viral replicase [Nandina mosaic virus] 52 3e-06
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 53 3e-06
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 53 4e-06
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 52 8e-06
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 64.3 bits (155), Expect = 4e-10
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
HT LKV + LS QL A+H LG++R GGPLLP++T +QAS +
Sbjct: 466 HTQLKVLCSALSEGQLEAIHALGHSRCGGPLLPELTAKSTPVEQCPDLPPCPTKSQASPA 525
Query: 72 LNQGDHTDEAPVNSDPATLPWVAW 1
+ D P +P TLPWVAW
Sbjct: 526 SSNPSGPDAQPTAQNPETLPWVAW 549
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 1e-07
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALHELGNTR GGPLLP+ T A+
Sbjct: 463 HQSLRLNCPTLSEHQLWALHELGNTRCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q + P DP TLPWVAW
Sbjct: 520 PSQRNTQAPDLPSPQDPTTLPWVAW 544
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 55.5 bits (132), Expect = 5e-07
Identities = 32/84 (38%), Positives = 38/84 (45%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
HT LKV L +QL A+H LG+ R GGPLLP T + AS +
Sbjct: 468 HTQLKVLCDTLPEKQLEAIHALGHLRCGGPLLPAPTQSCSPAEPCPDLPPSPVKSTASPA 527
Query: 72 LNQGDHTDEAPVNSDPATLPWVAW 1
+ D P P TLPWVAW
Sbjct: 528 SPDPNVLDAQPTTQAPETLPWVAW 551
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 54.3 bits (129), Expect = 1e-06
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALHELGN R GGPLLP+ T A+
Sbjct: 463 HQSLRLDCPTLSEHQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 54.3 bits (129), Expect = 1e-06
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALHELGN R GGPLLP+ T A+
Sbjct: 463 HXSLRLDCPTLSEHQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 54.3 bits (129), Expect = 1e-06
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALHELGN R GGPLLP+ T A+
Sbjct: 463 HQSLRLDCPTLSEHQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 54.3 bits (129), Expect = 1e-06
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALHELGN R GGPLLP+ T A+
Sbjct: 463 HQSLRLDCPTLSEHQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 52.4 bits (124), Expect(2) = 3e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -2
Query: 255 SHTSLKVGHADLSTEQLRALHELGNTRLGGPLLPK 151
+HTSLKV LS EQL ALHELGN+R GGP+LPK
Sbjct: 467 THTSLKVVPQSLSPEQLSALHELGNSRCGGPMLPK 501
Score = 25.8 bits (55), Expect(2) = 3e-06
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 118 PRPPPRTKTHSSQRKPEPRGPHRRGPSQQRPRNPALGRL 2
P P R+ H+ R RR P QQR NP +G L
Sbjct: 497 PMLPKRSSNHTHTSSDLLR---RRHPRQQRSTNPPMGSL 532
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 53.1 bits (126), Expect = 3e-06
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL +LHELGN R GGPLLP+ T A+
Sbjct: 463 HQSLRLDCPTLSEHQLWSLHELGNARCGGPLLPQ---RPDTATVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 52.8 bits (125), Expect = 4e-06
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALH+LGN R GGPLLP+ T A+
Sbjct: 463 HQSLRLDCPTLSEHQLWALHKLGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 52.0 bits (123), Expect = 8e-06
Identities = 33/85 (38%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = -2
Query: 252 HTSLKVGHADLSTEQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXPTQASAS 73
H SL++ LS QL ALH LGN R GGPLLP+ T A+
Sbjct: 463 HQSLRLDCPTLSEHQLWALHALGNARCGGPLLPQ---RPDTSTAVEPCPDLPPETHAAPE 519
Query: 72 LNQ-GDHTDEAPVNSDPATLPWVAW 1
+Q P DP TLPWVAW
Sbjct: 520 PSQRNTQAPNLPSPQDPTTLPWVAW 544