BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00009184
         (268 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003549331.2 PREDICTED: pentatricopeptide repeat-containing pr...    73   4e-13
KHN03541.1 Pentatricopeptide repeat-containing protein, chloropl...    70   4e-12
KHN42271.1 Pentatricopeptide repeat-containing protein, chloropl...    64   4e-10
XP_006584099.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   4e-10
XP_007154040.1 hypothetical protein PHAVU_003G086100g [Phaseolus...    64   4e-10
XP_016195774.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   6e-10
XP_015940563.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   3e-09
XP_014509541.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   2e-08
XP_017412120.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-08
XP_004507605.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   2e-07
XP_003610579.1 pentatricopeptide (PPR) repeat protein [Medicago ...    55   8e-07

>XP_003549331.2 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max] KRH01964.1 hypothetical
           protein GLYMA_17G006500 [Glycine max]
          Length = 712

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 37/58 (63%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
 Frame = +3

Query: 90  GGEMAYRLCSTPSALLHDLPSISSSS---RKFKVRNFIPSFQPPSPLTPHSKTFLHAN 254
           G +MAY LCS+PS+L HDLPSISSSS   RKFK+RN    FQP    TPHSKT LH +
Sbjct: 21  GAKMAYNLCSSPSSLFHDLPSISSSSSSCRKFKLRNSSSFFQPSPSPTPHSKTLLHVS 78


>KHN03541.1 Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 689

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSISSSS---RKFKVRNFIPSFQPPSPLTPHSKTFLHAN 254
           MAY LCS+PS+L HDLPSISSSS   RKFK+RN    FQP    TPHSKT LH +
Sbjct: 1   MAYNLCSSPSSLFHDLPSISSSSSSCRKFKLRNSSSFFQPSPSPTPHSKTLLHVS 55


>KHN42271.1 Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 685

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSI--SSSSRKFKVRNFIPSFQPPSPLTPHSKTFLHAN 254
           MAY LCS+PS+L HDLPSI  SSSSRKFK+RN        S LTPHSKT LH +
Sbjct: 1   MAYNLCSSPSSLFHDLPSISSSSSSRKFKLRNL-----SSSSLTPHSKTLLHVS 49


>XP_006584099.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max] KRH51188.1 hypothetical
           protein GLYMA_07G267500 [Glycine max]
          Length = 685

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSI--SSSSRKFKVRNFIPSFQPPSPLTPHSKTFLHAN 254
           MAY LCS+PS+L HDLPSI  SSSSRKFK+RN        S LTPHSKT LH +
Sbjct: 1   MAYNLCSSPSSLFHDLPSISSSSSSRKFKLRNL-----SSSSLTPHSKTLLHVS 49


>XP_007154040.1 hypothetical protein PHAVU_003G086100g [Phaseolus vulgaris]
           ESW26034.1 hypothetical protein PHAVU_003G086100g
           [Phaseolus vulgaris]
          Length = 704

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 40/68 (58%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSI---------SSSSRKFKVRNFIPSFQPPSP---LTPHSKTF 242
           MAY LCS+PS+L HDLPSI         SSSSRKFK+RN   S   PSP   LT  SKT 
Sbjct: 1   MAYNLCSSPSSLFHDLPSISSSPSSSSSSSSSRKFKLRNLSSSSFQPSPSHSLTLPSKTL 60

Query: 243 LHANHVSL 266
           LHA  VSL
Sbjct: 61  LHAPQVSL 68


>XP_016195774.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Arachis ipaensis]
          Length = 705

 Score = 63.9 bits (154), Expect = 6e-10
 Identities = 42/63 (66%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDL-PSISSSSRKFK----VRNFIPSFQPPS-PLTP-HSKTFLHANH 257
           MAY +CS+PS  LH L PSI SSS  FK    VRNF  SFQPPS PLTP  S+TFLHAN 
Sbjct: 1   MAYHVCSSPS--LHSLSPSIGSSSSSFKFNHKVRNFASSFQPPSTPLTPSQSRTFLHANC 58

Query: 258 VSL 266
           VSL
Sbjct: 59  VSL 61


>XP_015940563.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Arachis duranensis]
          Length = 705

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 41/63 (65%), Positives = 44/63 (69%), Gaps = 7/63 (11%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDL-PSISSSSRKFK----VRNFIPSFQPPS-PLTP-HSKTFLHANH 257
           MAY +CS+PS  LH L PSI SSS  FK    VRNF  SFQPPS  LTP  S+TFLHAN 
Sbjct: 1   MAYHVCSSPS--LHSLSPSIGSSSSSFKFNHKVRNFASSFQPPSTSLTPSQSRTFLHANR 58

Query: 258 VSL 266
           VSL
Sbjct: 59  VSL 61


>XP_014509541.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vigna radiata var. radiata]
           XP_014509542.1 PREDICTED: pentatricopeptide
           repeat-containing protein At4g16390, chloroplastic
           [Vigna radiata var. radiata] XP_014509543.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vigna radiata var. radiata]
          Length = 708

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 38/71 (53%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSI------------SSSSRKFKVRNF-IPSFQP--PSPLTPHS 233
           MAY +CS+PS+L HD PSI            SSSSRKFK+RN    SFQP      T HS
Sbjct: 1   MAYNICSSPSSLFHDFPSISSSSSPSSSSSSSSSSRKFKLRNLSSSSFQPFHSHSATLHS 60

Query: 234 KTFLHANHVSL 266
           KT LHA  VSL
Sbjct: 61  KTLLHAPQVSL 71


>XP_017412120.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vigna angularis] KOM33709.1 hypothetical
           protein LR48_Vigan01g326500 [Vigna angularis] BAT77306.1
           hypothetical protein VIGAN_01540500 [Vigna angularis
           var. angularis]
          Length = 709

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 38/72 (52%), Positives = 42/72 (58%), Gaps = 16/72 (22%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSI-------------SSSSRKFKVRNF-IPSFQP--PSPLTPH 230
           MAY +CS+PS+L HD PSI             SSSSRKFK+RN    SFQP      T H
Sbjct: 1   MAYNICSSPSSLFHDFPSISSSSSSPSSSSSSSSSSRKFKLRNLSSSSFQPSHSHSATLH 60

Query: 231 SKTFLHANHVSL 266
           SKT LHA  VSL
Sbjct: 61  SKTLLHAPQVSL 72


>XP_004507605.1 PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Cicer arietinum]
          Length = 688

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = +3

Query: 99  MAYRLCST-PSALLHDLPSISSSSRKFKVRNFIPSFQPPSPLTPHSKTFLHAN 254
           MAY LCS+ PS+L HD PSISS   KFKVRNF PSFQ     TP SKT LH +
Sbjct: 1   MAYHLCSSSPSSLFHDPPSISSL--KFKVRNFSPSFQ-----TPSSKTLLHVS 46


>XP_003610579.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
           AES92776.1 pentatricopeptide (PPR) repeat protein
           [Medicago truncatula]
          Length = 706

 Score = 55.1 bits (131), Expect = 8e-07
 Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 8/58 (13%)
 Frame = +3

Query: 99  MAYRLCSTPSALLHDLPSISSSSRKFKVRNFIPSFQPP--------SPLTPHSKTFLH 248
           M+Y LCS+ S L HD   ++ SSRKFK+RNF  SF  P        S LTPHSKT LH
Sbjct: 1   MSYHLCSSSSPLFHD--PLTISSRKFKLRNFPSSFHTPSSSSSSSSSSLTPHSKTLLH 56