BLASTX nr result
ID: Glycyrrhiza28_contig00008823
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00008823
(276 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcri... 114 9e-28
KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan] 114 2e-27
KRH00533.1 hypothetical protein GLYMA_18G218900 [Glycine max] 107 5e-25
KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja] 107 5e-25
XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcri... 107 5e-25
XP_003623670.1 mediator of RNA polymerase II transcription subun... 105 1e-24
GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterran... 102 1e-23
XP_014497735.1 PREDICTED: mediator of RNA polymerase II transcri... 102 2e-23
XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcri... 102 2e-23
XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcri... 101 4e-23
BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis ... 101 4e-23
XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcri... 86 2e-17
XP_007140028.1 hypothetical protein PHAVU_008G078200g [Phaseolus... 84 4e-17
XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcri... 82 2e-16
XP_010653098.1 PREDICTED: mediator of RNA polymerase II transcri... 82 3e-16
CBI31143.3 unnamed protein product, partial [Vitis vinifera] 82 3e-16
CAQ58623.1 unknown gene [Vitis vinifera] 82 3e-16
XP_019077175.1 PREDICTED: mediator of RNA polymerase II transcri... 82 4e-16
XP_010653099.1 PREDICTED: mediator of RNA polymerase II transcri... 82 4e-16
XP_002264843.2 PREDICTED: mediator of RNA polymerase II transcri... 82 4e-16
>XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cicer arietinum]
Length = 1318
Score = 114 bits (286), Expect = 9e-28
Identities = 56/92 (60%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCF--QKDHPSMWKFIHHAXXXXXX 179
N E PTAWVTEL++YLNS+GVELPS E LLVSQMC +KDHPSMWKF+HHA
Sbjct: 25 NNETPTAWVTELIQYLNSVGVELPSPEFAHLLVSQMCSENEKDHPSMWKFLHHALASRLI 84
Query: 180 XXXXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
V PRR HPHAYALFLPLL+
Sbjct: 85 FPLQLLSLLSSKVFPRRYSHPHAYALFLPLLA 116
>KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan]
Length = 1233
Score = 114 bits (284), Expect = 2e-27
Identities = 54/86 (62%), Positives = 60/86 (69%)
Frame = +3
Query: 18 PTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXXXXX 197
PTAWVTELVE+LNS+GV LPS ELGEL+VSQ+CF +HP MWKF HHA
Sbjct: 28 PTAWVTELVEHLNSLGVALPSPELGELIVSQICFDNNHPWMWKFTHHALSSRLLFPFQIL 87
Query: 198 XXXXXNVIPRRRFHPHAYALFLPLLS 275
NVIP R HPHAYALFLPLL+
Sbjct: 88 SLLASNVIPHRHAHPHAYALFLPLLA 113
>KRH00533.1 hypothetical protein GLYMA_18G218900 [Glycine max]
Length = 966
Score = 107 bits (266), Expect = 5e-25
Identities = 49/90 (54%), Positives = 60/90 (66%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
N + PTAWVTELVE+ N++G+ LP ELGELLVSQ+CF +HP +WKFIHHA
Sbjct: 28 NNKPPTAWVTELVEHFNTLGIALPCPELGELLVSQICFDNNHPLIWKFIHHALSSRLLFP 87
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
NV+ R HPHA+ALFLPLL+
Sbjct: 88 LQILSLLSSNVLRHRHSHPHAFALFLPLLA 117
>KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja]
Length = 1332
Score = 107 bits (266), Expect = 5e-25
Identities = 49/90 (54%), Positives = 60/90 (66%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
N + PTAWVTELVE+ N++G+ LP ELGELLVSQ+CF +HP +WKFIHHA
Sbjct: 28 NNKPPTAWVTELVEHFNTLGIALPCPELGELLVSQICFDNNHPLIWKFIHHALSSRLLFP 87
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
NV+ R HPHA+ALFLPLL+
Sbjct: 88 LQILSLLSSNVLRHRHSHPHAFALFLPLLA 117
>XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Glycine max] KRH00532.1 hypothetical protein
GLYMA_18G218900 [Glycine max]
Length = 1332
Score = 107 bits (266), Expect = 5e-25
Identities = 49/90 (54%), Positives = 60/90 (66%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
N + PTAWVTELVE+ N++G+ LP ELGELLVSQ+CF +HP +WKFIHHA
Sbjct: 28 NNKPPTAWVTELVEHFNTLGIALPCPELGELLVSQICFDNNHPLIWKFIHHALSSRLLFP 87
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
NV+ R HPHA+ALFLPLL+
Sbjct: 88 LQILSLLSSNVLRHRHSHPHAFALFLPLLA 117
>XP_003623670.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] AES79888.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 1320
Score = 105 bits (263), Expect = 1e-24
Identities = 53/91 (58%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQ--KDHPSMWKFIHHAXXXXXX 179
+ E+PT WVTEL+EY NS+GVELPS+EL ELLVSQMC + KDHPS WKF+HHA
Sbjct: 23 SNESPTVWVTELIEYFNSVGVELPSSELVELLVSQMCSENVKDHPSTWKFLHHALSSKLI 82
Query: 180 XXXXXXXXXXXNVIPRRRFHPHAYALFLPLL 272
V R HPHAYALFLPLL
Sbjct: 83 FPLQLLSLLAYKVFRNRFSHPHAYALFLPLL 113
>GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterraneum]
Length = 1247
Score = 102 bits (255), Expect = 1e-23
Identities = 52/92 (56%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQ---KDHPSMWKFIHHAXXXXX 176
+ E+P WVTEL+EYLNS+GVELPS+EL ELLVSQ+C + KDHPSMWKF+H A
Sbjct: 25 SNESPMTWVTELIEYLNSVGVELPSSELVELLVSQICSENGGKDHPSMWKFLHQALSSRL 84
Query: 177 XXXXXXXXXXXXNVIPRRRFHPHAYALFLPLL 272
V R HPHAYALFLPLL
Sbjct: 85 IFPLQLLTLLSYKVFQCRNSHPHAYALFLPLL 116
>XP_014497735.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Vigna radiata var. radiata]
Length = 1043
Score = 102 bits (254), Expect = 2e-23
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
+K+ A VTELVE+LN++G+ LPS ELGELLVSQ+CF +HP MWKF HHA
Sbjct: 26 SKKPAAALVTELVEHLNTLGIALPSPELGELLVSQICFDNNHPWMWKFTHHALSSRLLFP 85
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
N IP R HPH++ALFLPLLS
Sbjct: 86 LQILSLLASNAIPHRHSHPHSFALFLPLLS 115
>XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Vigna radiata var. radiata]
Length = 1326
Score = 102 bits (254), Expect = 2e-23
Identities = 49/90 (54%), Positives = 59/90 (65%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
+K+ A VTELVE+LN++G+ LPS ELGELLVSQ+CF +HP MWKF HHA
Sbjct: 26 SKKPAAALVTELVEHLNTLGIALPSPELGELLVSQICFDNNHPWMWKFTHHALSSRLLFP 85
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
N IP R HPH++ALFLPLLS
Sbjct: 86 LQILSLLASNAIPHRHSHPHSFALFLPLLS 115
>XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Vigna angularis]
Length = 1331
Score = 101 bits (252), Expect = 4e-23
Identities = 49/90 (54%), Positives = 58/90 (64%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
+K+ A VTELVE+LN++G+ LPS ELGELLVSQ CF +HP MWKF HHA
Sbjct: 26 SKKPAAALVTELVEHLNTLGIALPSPELGELLVSQTCFDNNHPWMWKFTHHALSSRLLFP 85
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
N IP R HPH++ALFLPLLS
Sbjct: 86 LQILSLLASNAIPHRHSHPHSFALFLPLLS 115
>BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis var.
angularis]
Length = 1331
Score = 101 bits (252), Expect = 4e-23
Identities = 49/90 (54%), Positives = 58/90 (64%)
Frame = +3
Query: 6 NKEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXX 185
+K+ A VTELVE+LN++G+ LPS ELGELLVSQ CF +HP MWKF HHA
Sbjct: 26 SKKPAAALVTELVEHLNTLGIALPSPELGELLVSQTCFDNNHPWMWKFTHHALSSRLLFP 85
Query: 186 XXXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
N IP R HPH++ALFLPLLS
Sbjct: 86 LQILSLLASNAIPHRHSHPHSFALFLPLLS 115
>XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis duranensis]
Length = 1324
Score = 85.5 bits (210), Expect = 2e-17
Identities = 41/85 (48%), Positives = 51/85 (60%)
Frame = +3
Query: 18 PTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXXXXX 197
P A V ELV++LNS+ + LPS +L LLVS +CF +HP +WKF+HHA
Sbjct: 33 PGACVIELVDFLNSLRLHLPSPDLAHLLVSHLCFDNNHPWLWKFLHHALSSRLLFPLQLL 92
Query: 198 XXXXXNVIPRRRFHPHAYALFLPLL 272
VIP R FHP A+ALFL LL
Sbjct: 93 SLLSSRVIPHRHFHPQAHALFLALL 117
>XP_007140028.1 hypothetical protein PHAVU_008G078200g [Phaseolus vulgaris]
ESW12022.1 hypothetical protein PHAVU_008G078200g
[Phaseolus vulgaris]
Length = 960
Score = 84.3 bits (207), Expect = 4e-17
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = +3
Query: 24 AWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXXXXXXX 203
A VTELVE+LNS+G+ LP ELGELLVSQ+ + P MWKF HHA
Sbjct: 33 ARVTELVEHLNSLGIALPCPELGELLVSQIYDDNNQPWMWKFTHHALSSRLLFPLQILSL 92
Query: 204 XXXNVIPRRRFHPHAYALFLPLLS 275
N IP R PH++ALFLPLL+
Sbjct: 93 LASNAIPHRHSQPHSFALFLPLLA 116
>XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis ipaensis]
Length = 1326
Score = 82.4 bits (202), Expect = 2e-16
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 18 PTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXXXXX 197
P A V ELV++LNS+ + LPS +L LLVS +CF +HP +WKF+HHA
Sbjct: 33 PGACVIELVDFLNSLRLHLPSPDLAHLLVSHLCFDNNHPWLWKFLHHALSSRLLFPLQLL 92
Query: 198 XXXXXNVIPRRRFHPHAYALFLPLL 272
VIP R HP A+ALFL LL
Sbjct: 93 SLLSSRVIPHRHSHPQAHALFLALL 117
>XP_010653098.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Vitis vinifera]
Length = 1330
Score = 82.0 bits (201), Expect = 3e-16
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 9 KEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXX 188
+E P WVTE+VE + S G+ LPS ELG++LVSQ+CF ++ PS WKF+ HA
Sbjct: 23 REPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPSRWKFLDHAISCGLLSHF 82
Query: 189 XXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
+IP R P AY L+L LLS
Sbjct: 83 HVLSQLTSRIIPHRWSQPEAYRLYLELLS 111
>CBI31143.3 unnamed protein product, partial [Vitis vinifera]
Length = 1342
Score = 82.0 bits (201), Expect = 3e-16
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 9 KEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXX 188
+E P WVTE+VE + S G+ LPS ELG++LVSQ+CF ++ PS WKF+ HA
Sbjct: 34 REPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPSRWKFLDHAISCGLLSHF 93
Query: 189 XXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
+IP R P AY L+L LLS
Sbjct: 94 HVLSQLTSRIIPHRWSQPEAYRLYLELLS 122
>CAQ58623.1 unknown gene [Vitis vinifera]
Length = 1472
Score = 82.0 bits (201), Expect = 3e-16
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 9 KEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXX 188
+E P WVTE+VE + S G+ LPS ELG++LVSQ+CF ++ PS WKF+ HA
Sbjct: 116 REPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPSRWKFLDHAISCGLLSHF 175
Query: 189 XXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
+IP R P AY L+L LLS
Sbjct: 176 HVLSQLTSRIIPHRWSQPEAYRLYLELLS 204
Score = 55.5 bits (132), Expect = 6e-07
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +3
Query: 39 LVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHA 161
+V+ L+S G+ LPS ELG++LVSQ+CF + PSMWKF+ HA
Sbjct: 1 MVKCLDSAGLGLPSVELGQVLVSQLCFAHNCPSMWKFLDHA 41
>XP_019077175.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X4 [Vitis vinifera]
Length = 976
Score = 81.6 bits (200), Expect = 4e-16
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 9 KEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXX 188
+E P W TE+V+ L+S G+ LPS ELG++LVSQ+CF + PSMWKF+ HA
Sbjct: 25 REPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFAHNCPSMWKFLDHALSSRLLSPL 84
Query: 189 XXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
+IP R P AY L+L LLS
Sbjct: 85 HVLSLLTSRIIPHRWSQPEAYRLYLELLS 113
>XP_010653099.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X3 [Vitis vinifera]
Length = 1310
Score = 81.6 bits (200), Expect = 4e-16
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 9 KEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXX 188
+E P W TE+V+ L+S G+ LPS ELG++LVSQ+CF + PSMWKF+ HA
Sbjct: 25 REPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFAHNCPSMWKFLDHALSSRLLSPL 84
Query: 189 XXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
+IP R P AY L+L LLS
Sbjct: 85 HVLSLLTSRIIPHRWSQPEAYRLYLELLS 113
>XP_002264843.2 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Vitis vinifera]
Length = 1332
Score = 81.6 bits (200), Expect = 4e-16
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 9 KEAPTAWVTELVEYLNSMGVELPSAELGELLVSQMCFQKDHPSMWKFIHHAXXXXXXXXX 188
+E P W TE+V+ L+S G+ LPS ELG++LVSQ+CF + PSMWKF+ HA
Sbjct: 25 REPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFAHNCPSMWKFLDHALSSRLLSPL 84
Query: 189 XXXXXXXXNVIPRRRFHPHAYALFLPLLS 275
+IP R P AY L+L LLS
Sbjct: 85 HVLSLLTSRIIPHRWSQPEAYRLYLELLS 113